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Dev Biol
2008 Jan 01;3131:307-19. doi: 10.1016/j.ydbio.2007.10.023.
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Sox3 expression is maintained by FGF signaling and restricted to the neural plate by Vent proteins in the Xenopus embryo.
Rogers CD
,
Archer TC
,
Cunningham DD
,
Grammer TC
,
Casey EM
.
Abstract
The formation of the nervous system is initiated when ectodermal cells adopt the neural fate. Studies in Xenopus demonstrate that inhibition of BMP results in the formation of neural tissue. However, the molecular mechanism driving the expression of early neural genes in response to this inhibition is unknown. Moreover, controversy remains regarding the sufficiency of BMP inhibition for neural induction. To address these questions, we performed a detailed analysis of the regulation of the soxB1 gene, sox3, one of the earliest genes expressed in the neuroectoderm. Using ectodermal explant assays, we analyzed the role of BMP, Wnt and FGF signaling in the regulation of sox3 and the closely related soxB1 gene, sox2. Our results demonstrate that both sox3 and sox2 are induced in response to BMP antagonism, but by distinct mechanisms and that the activation of both genes is independent of FGF signaling. However, both require FGF for the maintenance of their expression. Finally, sox3 genomic elements were identified and characterized and an element required for BMP-mediated repression via Vent proteins was identified through the use of transgenesis and computational analysis. Interestingly, none of the elements required for sox3 expression were identified in the sox2 locus. Together our data indicate that two closely related genes have unique mechanisms of gene regulation at the onset of neural development.
Fig. 1. Comparison of sox3 and sox2 expression in whole embryos and ectodermal explants. (A) Temporal expression of sox3 and sox2 in whole embryos examined by RT-PCR. ODC is used as a loading control. RT− is no reverse transcriptase and E is egg. (B) WISH analysis of sox3 and sox2 expression in cleavage (stage 6), blastula (stage 9), gastrula (stage 10–12.5) and neurula (stage 18) embryos. Stage 6–10 embryos are viewed from the animal pole with dorsal to the right, stage 10.5 and 12.5 embryos from the vegetal pole with dorsal to the top, and stage 18 embryos from dorsal side with anterior to the top. The arrowhead and asterisk mark the midline and otic placode, respectively. (C) Expression of sox3 and sox2 in animal ectodermal explants isolated from uninjected embryos and embryos injected with noggin mRNA (indicated by +).
Fig. 4. A 1.55 kb Xlsox3 upstream regulatory region is partially conserved in X. tropicalis and mimics endogenous sox3 expression (A–F) WISH of transgenic embryos expressing the Xlsox3-GFP reporter construct. (A) Vegetal view of a stage 10.5 and (B) stage 12 embryo with dorsal to the top. (C) Anterior view of a stage 21 embryo on top with a dorsal view of the same embryo directly below. (D) Lateral view of a stage 24 embryo with a dorsal view of the same embryo directly below. (E) Dorsal view of a stage 27 embryo. (F) Lateral view of the head of a stage 33 embryo. The line represents the sox3 upstream regulatory region and − 1.55 represents the distance in kb from the ATG. The green box represents the EGFP coding region and the black box the SV40 polyA region. (G) Evolutionary conserved regions between X. laevis and X. tropicalis sox3. A diagram of the sox3 regulatory region used in panels A–F is at the top with a percent identity plot (pip) of Xlsox3 aligned to a homologous region of Xtsox3 below it. At the bottom is a pip of Xtsox3 aligned to Xlsox3. The blue box represents a 484-bp region in X. laevis which does not align to the Xtsox3 sequence. The gray box represents a 30-bp region which is conserved between mouse and Xlsox3. The X-axis of the pip is the length of the sequence in bases or kilobases as designated. The Y-axis spans 50–100% nucleotide identify with the light horizontal line in the center representing 75% nucleotide identity. The red regions under the curve represent evolutionary conserved blocks. Two large blocks of the Xlsox3 upstream regulatory region align with Xtsox3. In Xtsox3, the first block (farthest from the ATG) is split into two blocks.
sox2 (SRY (sex determining region Y)-box 2) expressed in Xenopus laevis embryo via in situ hybridization, stage 18, dorsal view, anteriorleft.
Fig. 2. FGF is required for the maintenance but not the induction of sox2 and sox3 expression in ectodermal explants. Expression of (A) sox3 and (B) sox2 in animal ectodermal explants as revealed by WISH. Explants were excised between stages 8 and 9 from untreated embryos or those injected at the 1-cell stage with mRNA for noggin alone, noggin plus δTCF3, noggin plus δXfz8 or noggin plus XFD mRNA. Explants were cultured until early gastrula (stage 10.5/11), late gastrula (stage 12.5) or neurula (stage 17) stage as determined by whole embryo controls.
Fig. 3. Sox3 inhibition by BMP and sox2 induction by Noggin require de novo protein synthesis. Expression of (A) sox3 and (B) sox2 in ectodermal explants revealed by WISH. Explants were excised at stage 8–9 from untreated embryos or embryos injected with noggin mRNA at the 1-cell stage. Explants were incubated with or without BMP protein and/or cycloheximide (CHX) as indicated at the top of each row. Explants were collected at early gastrula (stage 10.5), late gastrula (stage 12.5) or neurula (stage 17) as indicated to the left. The whole embryo control by which the stage was determined is in the column on the far right.
Fig. 5. A 74-bp region is required for expression of sox3-GFP. WISH for GFP expression in gastrula (stage 10.5) and neurula (stage 17–20) transgenic embryos containing sox3-GFP or deletions. (A) Diagrams of 5′ end and internal deletions of the sox3 upstream regulatory region are labeled p1–6, 11, 12, 15 and 16. The region included in the construct is indicated by a bar and deletions by the absence of this bar. A red bar denotes no expression of GFP, while a green bar marks those constructs that drive GFP expression. Numbers indicate the deletion end points with the left dashed vertical line marking 746 bp upstream of the ATG and the right dashed line marking 672 bp upstream. (B) A model summarizing the data. The region between − 672 bp and − 746 bp (green A2, activator 2) is required for expression except when R1 (repressor module) is deleted. In the absence of A2 and R1, a region between − 746 bp and − 1.55 kb (A1) is required for expression. The total numbers of embryos with the expression pattern shown and the relative levels of expression are in Table S1.
Fig. 6. Identification of transcription factor binding sites required for regulation of sox3-GFP expression. (A) Sequence of regulatory elements and putative transcription factor binding sites. The boxed region is the putative activator module, A2, which is deleted in p4. The remaining sequence is the putative repressor module, R1 which is deleted in p7. The entire region in A plus sequences up to − 299 are deleted in p6. Putative forkhead (FKHD) binding sites are labeled in green and putative Vent1 and Vent2 sites are in red. (B) WISH of transgenic embryos (stage 17–20) expressing sox3-GFP constructs. Embryos are a dorsal view with anterior to the right. A diagram of the upstream regulatory region shown in A is on the left. The numbers in the lower righthand corner refer to the number of embryos with the expression pattern shown over the total number of embryos. (C) WISH of transgenic embryos (stage 12) expressing sox3-GFP constructs. Embryos are a vegetal view with dorsal to the top. An inverted triangle indicates a deletion and an X indicates that a site has been mutated. The total numbers of embryos with the expression pattern shown are in Table 1. Putative TF sites from panel A are represented schematically in the same colors: green circle, Fkhd; red hexagon, Vent1 and Vent2.
Fig. 7. Vent1 and Vent2 repress sox3 and sox3-GFP expression. (A) Animal pole view of WISH for GFP in stage 12.5 embryos injected at the 1-cell stage with 50 pg sox3-GFP DNA or p10 DNA (V1 and V2 sites mutated), lacZ mRNA as a tracer (light blue) and vent (V1), vent2 (V2), VPvent1 (VPV1) or VPvent2 (VPV2) mRNA. (B) WISH of sox3 in stage 12.5 embryos injected with lacZ mRNA and vent mRNA as indicated. 1 of 32 cells was injected with V1 or V2 mRNA and 1 of 2 cells was injected with VPV1 or VPV2 mRNA. Embryos are a dorsal view. The numbers in the righthand corner are the numbers of embryos with the same phenotype as that shown over the total number of embryos. (C) RT-PCR using primers to sox3, geminin or ODC as a loading control of either uninjected ectodermal explants or those injected with noggin, V1, V2, V1 + V2, VPV1 and/or VPV2 mRNA.
Amaya,
Expression of a dominant negative mutant of the FGF receptor disrupts mesoderm formation in Xenopus embryos.
1991, Pubmed,
Xenbase
Amaya,
Expression of a dominant negative mutant of the FGF receptor disrupts mesoderm formation in Xenopus embryos.
1991,
Pubmed
,
Xenbase
Avilion,
Multipotent cell lineages in early mouse development depend on SOX2 function.
2003,
Pubmed
Baker,
Wnt signaling in Xenopus embryos inhibits bmp4 expression and activates neural development.
1999,
Pubmed
,
Xenbase
Bertrand,
Neural tissue in ascidian embryos is induced by FGF9/16/20, acting via a combination of maternal GATA and Ets transcription factors.
2003,
Pubmed
Bowles,
Phylogeny of the SOX family of developmental transcription factors based on sequence and structural indicators.
2000,
Pubmed
Dalton,
Characterization of SAP-1, a protein recruited by serum response factor to the c-fos serum response element.
1992,
Pubmed
Darras,
The BMP signaling pathway is required together with the FGF pathway for notochord induction in the ascidian embryo.
2001,
Pubmed
Delaune,
Neural induction in Xenopus requires early FGF signalling in addition to BMP inhibition.
2005,
Pubmed
,
Xenbase
Dermitzakis,
Evolution of transcription factor binding sites in Mammalian gene regulatory regions: conservation and turnover.
2002,
Pubmed
Domingos,
The Wnt/beta-catenin pathway posteriorizes neural tissue in Xenopus by an indirect mechanism requiring FGF signalling.
2001,
Pubmed
,
Xenbase
Fainsod,
The dorsalizing and neural inducing gene follistatin is an antagonist of BMP-4.
1997,
Pubmed
,
Xenbase
Friedle,
Cooperative interaction of Xvent-2 and GATA-2 in the activation of the ventral homeobox gene Xvent-1B.
2002,
Pubmed
,
Xenbase
Friedle,
Xvent-1 mediates BMP-4-induced suppression of the dorsal-lip-specific early response gene XFD-1' in Xenopus embryos.
1998,
Pubmed
,
Xenbase
Fürthauer,
A role for FGF-8 in the dorsoventral patterning of the zebrafish gastrula.
1997,
Pubmed
Gawantka,
Antagonizing the Spemann organizer: role of the homeobox gene Xvent-1.
1995,
Pubmed
,
Xenbase
Graham,
SOX2 functions to maintain neural progenitor identity.
2003,
Pubmed
Grand,
Targeting FGFR3 in multiple myeloma: inhibition of t(4;14)-positive cells by SU5402 and PD173074.
2004,
Pubmed
Gómez-Skarmeta,
The Wnt-activated Xiro1 gene encodes a repressor that is essential for neural development and downregulates Bmp4.
2001,
Pubmed
,
Xenbase
Hardcastle,
Distinct effects of XBF-1 in regulating the cell cycle inhibitor p27(XIC1) and imparting a neural fate.
2000,
Pubmed
,
Xenbase
Hardcastle,
FGF-8 stimulates neuronal differentiation through FGFR-4a and interferes with mesoderm induction in Xenopus embryos.
2000,
Pubmed
,
Xenbase
Hawley,
Disruption of BMP signals in embryonic Xenopus ectoderm leads to direct neural induction.
1995,
Pubmed
,
Xenbase
Heeg-Truesdell,
Neural induction in Xenopus requires inhibition of Wnt-beta-catenin signaling.
2006,
Pubmed
,
Xenbase
Hudson,
A conserved role for the MEK signalling pathway in neural tissue specification and posteriorisation in the invertebrate chordate, the ascidian Ciona intestinalis.
2003,
Pubmed
Kaufmann,
DNA recognition site analysis of Xenopus winged helix proteins.
1995,
Pubmed
,
Xenbase
Kishi,
Requirement of Sox2-mediated signaling for differentiation of early Xenopus neuroectoderm.
2000,
Pubmed
,
Xenbase
Kuroda,
Default neural induction: neuralization of dissociated Xenopus cells is mediated by Ras/MAPK activation.
2005,
Pubmed
,
Xenbase
Laumonnier,
Transcription factor SOX3 is involved in X-linked mental retardation with growth hormone deficiency.
2002,
Pubmed
Lemaire,
Early steps in the formation of neural tissue in ascidian embryos.
2002,
Pubmed
Linker,
Neural induction requires BMP inhibition only as a late step, and involves signals other than FGF and Wnt antagonists.
2004,
Pubmed
,
Xenbase
Loots,
rVISTA 2.0: evolutionary analysis of transcription factor binding sites.
2004,
Pubmed
Ludwig,
Evidence for stabilizing selection in a eukaryotic enhancer element.
2000,
Pubmed
Mizuseki,
Xenopus Zic-related-1 and Sox-2, two factors induced by chordin, have distinct activities in the initiation of neural induction.
1998,
Pubmed
,
Xenbase
Molenaar,
XTcf-3 transcription factor mediates beta-catenin-induced axis formation in Xenopus embryos.
1996,
Pubmed
,
Xenbase
Nitta,
Expression of Sox1 during Xenopus early embryogenesis.
2006,
Pubmed
,
Xenbase
Onichtchouk,
The Xvent-2 homeobox gene is part of the BMP-4 signalling pathway controlling [correction of controling] dorsoventral patterning of Xenopus mesoderm.
1996,
Pubmed
,
Xenbase
Ovcharenko,
zPicture: dynamic alignment and visualization tool for analyzing conservation profiles.
2004,
Pubmed
Peiffer,
A Xenopus DNA microarray approach to identify novel direct BMP target genes involved in early embryonic development.
2005,
Pubmed
,
Xenbase
Pera,
Integration of IGF, FGF, and anti-BMP signals via Smad1 phosphorylation in neural induction.
2003,
Pubmed
,
Xenbase
Pera,
Regulation of human embryonic stem cell differentiation by BMP-2 and its antagonist noggin.
2004,
Pubmed
Pevny,
A role for SOX1 in neural determination.
1998,
Pubmed
Piccolo,
Dorsoventral patterning in Xenopus: inhibition of ventral signals by direct binding of chordin to BMP-4.
1996,
Pubmed
,
Xenbase
Rao,
A divergent ets-related protein, elk-1, recognizes similar c-ets-1 proto-oncogene target sequences and acts as a transcriptional activator.
1992,
Pubmed
Rastegar,
Transcriptional regulation of Xvent homeobox genes.
1999,
Pubmed
,
Xenbase
Rex,
Dynamic expression of chicken Sox2 and Sox3 genes in ectoderm induced to form neural tissue.
1997,
Pubmed
Rizzoti,
SOX3 is required during the formation of the hypothalamo-pituitary axis.
2004,
Pubmed
Roël,
Lef-1 and Tcf-3 transcription factors mediate tissue-specific Wnt signaling during Xenopus development.
2002,
Pubmed
,
Xenbase
Sokol,
Analysis of Dishevelled signalling pathways during Xenopus development.
1996,
Pubmed
,
Xenbase
Streit,
Initiation of neural induction by FGF signalling before gastrulation.
2000,
Pubmed
Streit,
Chordin regulates primitive streak development and the stability of induced neural cells, but is not sufficient for neural induction in the chick embryo.
1998,
Pubmed
Streit,
Establishment and maintenance of the border of the neural plate in the chick: involvement of FGF and BMP activity.
1999,
Pubmed
Sun,
Design, synthesis, and evaluations of substituted 3-[(3- or 4-carboxyethylpyrrol-2-yl)methylidenyl]indolin-2-ones as inhibitors of VEGF, FGF, and PDGF receptor tyrosine kinases.
1999,
Pubmed
Takemoto,
Convergence of Wnt and FGF signals in the genesis of posterior neural plate through activation of the Sox2 enhancer N-1.
2006,
Pubmed
Taranova,
SOX2 is a dose-dependent regulator of retinal neural progenitor competence.
2006,
Pubmed
Taylor,
Tcf- and Vent-binding sites regulate neural-specific geminin expression in the gastrula embryo.
2006,
Pubmed
,
Xenbase
Treisman,
Spatial flexibility in ternary complexes between SRF and its accessory proteins.
1992,
Pubmed
Trindade,
DNA-binding specificity and embryological function of Xom (Xvent-2).
1999,
Pubmed
,
Xenbase
Tropepe,
Direct neural fate specification from embryonic stem cells: a primitive mammalian neural stem cell stage acquired through a default mechanism.
2001,
Pubmed
Uchikawa,
Functional analysis of chicken Sox2 enhancers highlights an array of diverse regulatory elements that are conserved in mammals.
2003,
Pubmed
Uchikawa,
Two distinct subgroups of Group B Sox genes for transcriptional activators and repressors: their expression during embryonic organogenesis of the chicken.
1999,
Pubmed
Uwanogho,
Embryonic expression of the chicken Sox2, Sox3 and Sox11 genes suggests an interactive role in neuronal development.
1995,
Pubmed
Vallier,
Nodal inhibits differentiation of human embryonic stem cells along the neuroectodermal default pathway.
2004,
Pubmed
Wallingford,
Regulation of convergent extension in Xenopus by Wnt5a and Frizzled-8 is independent of the canonical Wnt pathway.
2001,
Pubmed
,
Xenbase
Weinstein,
Neural induction in Xenopus laevis: evidence for the default model.
1997,
Pubmed
,
Xenbase
Wilson,
The status of Wnt signalling regulates neural and epidermal fates in the chick embryo.
2001,
Pubmed
,
Xenbase
Wilson,
An early requirement for FGF signalling in the acquisition of neural cell fate in the chick embryo.
2000,
Pubmed
,
Xenbase
Wilson,
Induction of epidermis and inhibition of neural fate by Bmp-4.
1995,
Pubmed
,
Xenbase
Wood,
Comparative expression of the mouse Sox1, Sox2 and Sox3 genes from pre-gastrulation to early somite stages.
1999,
Pubmed
Ying,
Conversion of embryonic stem cells into neuroectodermal precursors in adherent monoculture.
2003,
Pubmed
Zimmerman,
The Spemann organizer signal noggin binds and inactivates bone morphogenetic protein 4.
1996,
Pubmed
,
Xenbase