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XB-GRNA-29212836
gRNA Name:
dmrt1 gRNA5
Synonyms: dmrt1.L (alpha), Xbo.dmrt1
Genomic Target: dmrt1
PAM Sequence: GGT
Sequence: 5' GGTCTGCATCGGGCACACTTTT 3'
Synonyms: dmrt1.L (alpha), Xbo.dmrt1
Genomic Target: dmrt1
PAM Sequence: GGT
Sequence: 5' GGTCTGCATCGGGCACACTTTT 3'
Genomic Target | laevis.L | laevis.S | |||||
Identities | 18/22 | 18/22 | |||||
genome
gRNA
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5' CTAAGTGTGCCCGATGCAGAAA 3' |||||||||||||||||| 3' TTTTCACACGGGCTACGTCTGG 5' |
5' CGAAGTGTGCCCGATGCAGAAA 3' |||||||||||||||||| 3' TTTTCACACGGGCTACGTCTGG 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Genomic Target | ||
laevis 10.1 | Chr1L:139345552..139345573 | 18/22 | Sense | target | dmrt1.L | ||
Chr1S:118836953..118836974 | 18/22 | Sense | target | dmrt1.S | |||
Chr1S:118842625..118842646 | 18/22 | Sense | target | dmrt1.S | |||
Chr2L:182706985..182707006 | 19/22 | Sense | off-target | xdm-w | |||
Chr1L:129863427..129863448 | 19/22 | Sense | off-target | abca1.L | |||
Chr9_10S:42683331..42683352 | 19/22 | Sense | unknown | tropicalis 10.0 | Chr2:168095495..168095516 | 19/22 | Antisense | unknown |
Publications | |||||||
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