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XB-GRNA-23659479
gRNA Name:
vangl2 gRNA
Synonyms: trop vangl2 T5
Genomic Target: vangl2
PAM Sequence: TGG
Sequence: 5' TGCTGCTGCCCCAGATCCTATGG 3'
Synonyms: trop vangl2 T5
Genomic Target: vangl2
PAM Sequence: TGG
Sequence: 5' TGCTGCTGCCCCAGATCCTATGG 3'
Genomic Target | tropicalis | laevis.L | laevis.S | ||||
Identities | 23/23 | 23/23 | 23/23 | ||||
genome
gRNA
|
5' CCATAGGATCTGGGGCAGCAGCA 3' ||||||||||||||||||||||| 3' GGTATCCTAGACCCCGTCGTCGT 5' |
5' CCATAGGATCTGGGGCAGCAGCA 3' ||||||||||||||||||||||| 3' GGTATCCTAGACCCCGTCGTCGT 5' |
5' CCATAGGATCTGGGGCAGCAGCA 3' ||||||||||||||||||||||| 3' GGTATCCTAGACCCCGTCGTCGT 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Genomic Target | ||
laevis 9.2 | chr8L:112207708..112207730 | 23/23 | Antisense | target | vangl2.L | ||
chr8S:94045629..94045651 | 23/23 | Antisense | target | vangl2.S | |||
Scaffold95:67443..67465 | 20/23 | Antisense | off-target | ramp3.S | |||
chr1S:127184830..127184852 | 19/23 | Sense | off-target | ppil2.S | |||
chr7L:120004505..120004527 | 19/23 | Sense | off-target | arhgef10l.L | |||
chr3S:56746584..56746606 | 19/23 | Sense | off-target | LOC108712327 [provisional:duoxa1] | |||
chr1S:174493089..174493111 | 20/23 | Antisense | unknown | ||||
chr2L:4947265..4947287 | 19/23 | Sense | unknown | ||||
chr3S:119004739..119004761 | 19/23 | Antisense | unknown | ||||
chr9_10L:63843325..63843347 | 19/23 | Sense | unknown | tropicalis 10.0 | Chr8:137134076..137134098 | 23/23 | Antisense | target | vangl2 |
Chr5:152977871..152977893 | 19/23 | Antisense | off-target | dnajc27 | |||
Chr8:146067692..146067714 | 19/23 | Antisense | unknown | ||||
Publications | |||||||
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