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XB-GRNA-23659459
gRNA Name:
scn2a gRNA1
Synonyms: trop scn2a NS T1
Genomic Target: scn2a
PAM Sequence: GGG
Sequence: 5' GTGGATCAAGTGCTCCTATTGGG 3'
Synonyms: trop scn2a NS T1
Genomic Target: scn2a
PAM Sequence: GGG
Sequence: 5' GTGGATCAAGTGCTCCTATTGGG 3'
![Run BLAST on sequence](img/icons/rocket.gif)
Genomic Target | tropicalis | ||||||
Identities | 23/23 | ||||||
genome
gRNA
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5' CCCAATAGGAGCACTTGATCCAC 3' ||||||||||||||||||||||| 3' GGGTTATCCTCGTGAACTAGGTG 5' |
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Genomic Alignments ![]() |
Position | Identity | Strand | Target | Genomic Target | ||
laevis 9.2 | chr9_10L:63203897..63203919 | 22/23 | Sense | off-target | LOC108701353 [provisional:scn2a] | ||
chr5L:104851815..104851837 | 19/23 | Sense | off-target | pex5l.L | |||
chr1L:57371276..57371298 | 19/23 | Sense | off-target | larp1b.L | |||
chr9_10L:59019482..59019504 | 20/23 | Antisense | unknown | ||||
Scaffold68737:56..78 | 19/23 | Antisense | unknown | ||||
chr4L:109294709..109294731 | 19/23 | Sense | unknown | ||||
chr4S:37512261..37512283 | 19/23 | Antisense | unknown | ||||
chr5L:125368720..125368742 | 19/23 | Sense | unknown | tropicalis 10.0 | Chr9:70311191..70311213 | 23/23 | Antisense | target | scn2a |
Chr3:60103755..60103777 | 19/23 | Sense | off-target | tph2 | |||
Chr9:83276158..83276180 | 19/23 | Sense | off-target | asic4 | |||
Chr1:1824058..1824080 | 19/23 | Antisense | off-target | LOC116408372 | |||
Chr6:130204960..130204982 | 19/23 | Sense | unknown | ||||
Publications | |||||||
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