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XB-GRNA-23659447
gRNA Name:
rfx6 gRNA1
Synonyms: trop rfx6T
Genomic Target: rfx6
PAM Sequence: AGG
Sequence: 5' TGGGCATACAGTATGCATCGAGG 3'
Synonyms: trop rfx6T
Genomic Target: rfx6
PAM Sequence: AGG
Sequence: 5' TGGGCATACAGTATGCATCGAGG 3'
| Genomic Target | tropicalis | laevis.L | |||||
| Identities | 23/23 | 21/23 | |||||
genome
gRNA
|
5' CCTCGATGCATACTGTATGCCCA 3' ||||||||||||||||||||||| 3' GGAGCTACGTATGACATACGGGT 5' |
5' CCTCGATGCATACTCTATGCTCA 3' |||||||||||||| ||||| || 3' GGAGCTACGTATGACATACGGGT 5' |
|||||
| Genomic Alignments |
Position | Identity | Strand | Target | Genomic Target | ||
| laevis 9.2 | chr5L:75534039..75534061 | 21/23 | Sense | target | rfx6.L | ||
| chr8L:84750235..84750257 | 21/23 | Sense | off-target | fntb.L | |||
| chr8L:84750235..84750257 | 21/23 | Sense | off-target | slc8a3.L | |||
| chr4L:26012303..26012325 | 20/23 | Sense | off-target | atl3.L | |||
| chr9_10L:89263409..89263431 | 19/23 | Antisense | off-target | zc3h7a.L | |||
| chr1L:139641984..139642006 | 19/23 | Sense | off-target | LOC101027262 | |||
| chr5S:57009809..57009831 | 21/23 | Sense | unknown | ||||
| chr1L:191967751..191967773 | 20/23 | Sense | unknown | ||||
| chr1S:59324612..59324634 | 19/23 | Antisense | unknown | ||||
| chr3L:16248133..16248155 | 19/23 | Antisense | unknown | ||||
| chr5L:107327380..107327402 | 19/23 | Sense | unknown | tropicalis 10.0 | Chr5:74668842..74668864 | 23/23 | Sense | target | rfx6 |
| Chr1:125419237..125419259 | 19/23 | Sense | unknown | ||||
| Chr1:71413412..71413434 | 19/23 | Antisense | unknown | ||||
| Chr3:93612194..93612216 | 19/23 | Antisense | unknown | ||||
| Chr5:138353635..138353657 | 19/23 | Antisense | unknown | ||||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? | |||||||
| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||
