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XB-GRNA-23659142
gRNA Name:
rab3gap2 gRNA1
Synonyms: rab3gap2_g1, Xtr.rab3gap2 gRNA
Genomic Target: rab3gap2
PAM Sequence: TGG
Sequence: 5' GTGGAGCGGCTCTCTGACTG 3'
Synonyms: rab3gap2_g1, Xtr.rab3gap2 gRNA
Genomic Target: rab3gap2
PAM Sequence: TGG
Sequence: 5' GTGGAGCGGCTCTCTGACTG 3'
| Genomic Target | tropicalis | ||||||
| Identities | 20/20 | ||||||
genome
gRNA
|
5' CAGTCAGAGAGCCGCTCCAC 3' |||||||||||||||||||| 3' GTCAGTCTCTCGGCGAGGTG 5' |
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| Genomic Alignments |
Position | Identity | Strand | Target | Genomic Target | ||
| laevis 10.1 | Chr1L:186951430..186951449 | 18/20 | Antisense | off-target | trim36.L | ||
| Chr7S:80802046..80802065 | 16/20 | Antisense | unknown | ||||
| Chr7S:80825423..80825442 | 16/20 | Antisense | unknown | ||||
| Chr7S:80863755..80863774 | 16/20 | Antisense | unknown | ||||
| Chr7S:80856431..80856450 | 16/20 | Sense | unknown | ||||
| Chr5L:292464..292483 | 16/20 | Antisense | unknown | tropicalis 10.0 | Chr5:10573499..10573518 | 20/20 | Sense | target | rab3gap2 |
| Chr5:10573499..10573518 | 20/20 | Sense | off-target | iars2 | |||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos., Sci Rep 2020 |
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| ???morpholino.displaySummary.papersRecent??? |
Disrupted endosomal trafficking of the Vangl-Celsr polarity complex underlies congenital anomalies in Xenopus trachea-esophageal morphogenesis., Dev Cell 2025 |
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| ???morpholino.displaySummary.papersAll??? | |||||||
