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Summary Attributions Wiki
XB-GRNA-23659107
gRNA Name: foxj1 gRNA3
Synonyms: foxj1.S sgRNA
Genomic Target: foxj1

Sequence: 5' CTCCCATGGTTACAGGCAGC 3'



Genomic Target laevis.L laevis.S
Identities 19/20 20/20
genome
gRNA
 
5' GGTGCCTGTAACCATGGGAG 3'
   | ||||||||||||||||||
3' CGACGGACATTGGTACCCTC 5'
 
5' GCTGCCTGTAACCATGGGAG 3'
   ||||||||||||||||||||
3' CGACGGACATTGGTACCCTC 5'
     
Genomic Alignments Position Identity Strand Target Genomic Target
laevis 9.2 chr9_10S:33988450..33988469 20/20 Antisense target foxj1.S
chr9_10L:37363119..37363138 19/20 Antisense target foxj1.L
chr1S:93277919..93277938 17/20 Antisense off-target musk.S
chr2L:101037764..101037783 17/20 Sense off-target cblb.L
chr3L:81548821..81548840 17/20 Sense off-target dapk2.L
chr8L:91396839..91396858 17/20 Sense off-target arhgap5.L
chr8S:85233733..85233752 17/20 Sense off-target arhgap5.S
chr8S:85233733..85233752 17/20 Sense off-target LOC108700312 [provisional:eif5b]
chr1S:7894710..7894729 17/20 Antisense off-target LOC108706501 [provisional:ctnna2]
chr1S:7894798..7894817 17/20 Antisense off-target LOC108706501 [provisional:ctnna2]
chr1S:7894886..7894905 17/20 Antisense off-target LOC108706501 [provisional:ctnna2]
chr1S:7894930..7894949 17/20 Antisense off-target LOC108706501 [provisional:ctnna2]
chr1S:7894952..7894971 17/20 Antisense off-target LOC108706501 [provisional:ctnna2]
chr4S:42942887..42942906 16/20 Sense off-target LOC108715436 [provisional:kcng4]
chr9_10S:57665576..57665595 16/20 Antisense unknown
tropicalis 10.0 Chr8:113388677..113388696 17/20 Sense off-target arhgap5
Chr1:83016111..83016130 18/20 Sense unknown
Chr5:124585239..124585258 18/20 Antisense unknown
Chr9:60401931..60401950 18/20 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? CFAP43 modulates ciliary beating in mouse and Xenopus., Dev Biol 2020     
???morpholino.displaySummary.papersRecent??? The FOXJ1 target Cfap206 is required for sperm motility, mucociliary clearance of the airways and brain development., Development 2020     
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