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XB-MORPHOLINO-21948141
Morpholino Name:
foxa1 MO2
Synonyms: Foxa1-ATG MO
Target mRNA: foxa1
Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' ATGGCAAGTGCCCGAGAGAATCATT 3'
Source: Gene Tools LLC
Synonyms: Foxa1-ATG MO
Target mRNA: foxa1
Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' ATGGCAAGTGCCCGAGAGAATCATT 3'
![Run BLAST on sequence](img/icons/rocket.gif)
Source: Gene Tools LLC
Target mRNA | tropicalis | laevis.L | laevis.S | ||||
Identities | 23/25 | 25/25 | 23/25 | ||||
genome
MO
|
5' AATGTTTCTCTCGGGCACTTGCGAT 3' |||| ||||||||||||||||| || 3' TTACTAAGAGAGCCCGTGAACGGTA 5' |
5' AATGATTCTCTCGGGCACTTGCCAT 3' ||||||||||||||||||||||||| 3' TTACTAAGAGAGCCCGTGAACGGTA 5' |
5' AATGTTTCTCTCGGGCACTTGCGAT 3' |||| ||||||||||||||||| || 3' TTACTAAGAGAGCCCGTGAACGGTA 5' |
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Genomic Alignments ![]() |
Position | Identity | Strand | Target | Target mRNA | ||
laevis 10.1 | Chr8L:101209797..101209821 | 25/25 | Sense | target | foxa1.L | ||
Chr8S:3240917..3240941 | 23/25 | Antisense | target | foxa1.S | |||
Chr3L:18229938..18229962 | 21/25 | Sense | off-target | LOC108710765 | |||
Chr3S:10730098..10730122 | 21/25 | Sense | off-target | LOC108712602 | |||
Chr3S:10730154..10730178 | 21/25 | Sense | off-target | LOC108712602 | |||
Chr3S:10730210..10730234 | 21/25 | Sense | off-target | LOC108712602 | |||
Chr3S:10730238..10730262 | 21/25 | Sense | off-target | LOC108712602 | tropicalis 10.0 | Chr8:109061305..109061329 | 23/25 | Sense | target | foxa1 |
Chr8:30177248..30177272 | 21/25 | Antisense | off-target | crb2 | |||
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
Manipulating and Analyzing Cell Type Composition of the Xenopus Mucociliary Epidermis., Methods Mol Biol 2018 |
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???morpholino.displaySummary.papersRecent??? | |||||||
???morpholino.displaySummary.papersAll??? |