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XB-MORPHOLINO-17311281

Morpholino Name: eomes MO4
Synonyms: TGas141f06, XtEomes.2
Target mRNA: eomes

Morpholino Type: uncategorized morpholino
Sequence: 5' GGCTTCACTTACACACAGGAAGGG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 24/24 22/24 21/24
genome
MO
5' CCCTTCCTGTGTGTAAGTGAAGCC 3'
   ||||||||||||||||||||||||
3' GGGAAGGACACACATTCACTTCGG 5'
5' CCCTCCCCGTGTGTAAGTGAAGCC 3'
   |||| || ||||||||||||||||
3' GGGAAGGACACACATTCACTTCGG 5'
5' TCCTTCCTGAGAGTAAGTGAAGCC 3'
    |||||||| | ||||||||||||
3' GGGAAGGACACACATTCACTTCGG 5'
   
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr6L:50113036..50113059 22/24 Sense target eomes.L
Chr6S:40895971..40895994 21/24 Sense target eomes.S
Chr6L:15917708..15917731 20/24 Antisense off-target lmbr1.L
Chr3L:14871408..14871431 20/24 Sense off-target washc1.L
Chr3L:69436767..69436790 20/24 Sense unknown
tropicalis 10.0 Chr6:48273774..48273797 24/24 Sense target eomes
Chr1:91325145..91325168 20/24 Sense off-target kdm4b
Chr6:116925937..116925960 21/24 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006     
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