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XB-MORPHOLINO-17250447
Morpholino Name:
tbx1 MO1
Synonyms: Tbx1 #1
Target mRNA: tbx1
Morpholino Type: uncategorized morpholino
Sequence: 5' GAGAAAACAAAGGGTTAATGTG 3'
Source: Gene Tools LLC
Synonyms: Tbx1 #1
Target mRNA: tbx1
Morpholino Type: uncategorized morpholino
Sequence: 5' GAGAAAACAAAGGGTTAATGTG 3'
Source: Gene Tools LLC
Target mRNA | tropicalis | laevis.L | laevis.S | ||||
Identities | 22/22 | 22/22 | 22/22 | ||||
genome
MO
|
5' CACATTAACCCTTTGTTTTCTC 3' |||||||||||||||||||||| 3' GTGTAATTGGGAAACAAAAGAG 5' |
5' CACATTAACCCTTTGTTTTCTC 3' |||||||||||||||||||||| 3' GTGTAATTGGGAAACAAAAGAG 5' |
5' CACATTAACCCTTTGTTTTCTC 3' |||||||||||||||||||||| 3' GTGTAATTGGGAAACAAAAGAG 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Target mRNA | ||
laevis 10.1 | Chr1L:167923005..167923026 | 22/22 | Antisense | target | tbx1.L | ||
Chr1S:143460037..143460058 | 22/22 | Antisense | target | tbx1.S | |||
Chr9_10L:119098609..119098630 | 20/22 | Sense | off-target | fam83g.L | |||
Chr1L:102400094..102400115 | 20/22 | Sense | off-target | slc20a2.L | |||
Chr2S:6142963..6142984 | 19/22 | Antisense | off-target | abr.S | |||
Chr6S:17753109..17753130 | 19/22 | Sense | off-target | wac.S | |||
Chr4S:29534717..29534738 | 19/22 | Sense | off-target | nkd1.S | |||
Chr9_10S:74093275..74093296 | 19/22 | Antisense | off-target | atic.S | |||
Chr4L:116875365..116875386 | 19/22 | Antisense | off-target | mgst3.L | |||
Chr6L:51798943..51798964 | 19/22 | Antisense | off-target | stt3b.L | |||
Chr7S:1304076..1304097 | 19/22 | Sense | off-target | dusp5.S | |||
Chr3S:2416965..2416986 | 19/22 | Antisense | off-target | scube1.S | |||
Chr7L:136119512..136119533 | 19/22 | Sense | off-target | micos10.L | |||
Chr8S:35246997..35247018 | 19/22 | Antisense | off-target | col27a1.S | |||
Chr9_10L:17159005..17159026 | 19/22 | Antisense | off-target | slc17a9.L | |||
Chr1L:44237805..44237826 | 19/22 | Sense | off-target | LOC108696408 | |||
Chr1L:44283235..44283256 | 19/22 | Antisense | off-target | LOC108696420 | |||
Chr3S:1848107..1848128 | 19/22 | Antisense | off-target | LOC121402087 | |||
Chr3S:29284532..29284553 | 19/22 | Sense | off-target | LOC108712291 | |||
Chr6L:17820001..17820022 | 19/22 | Antisense | off-target | LOC108718748 | |||
Chr7S:111588880..111588901 | 19/22 | Antisense | off-target | LOC100191024 | |||
Chr2L:30818513..30818534 | 18/22 | Sense | off-target | abr.L | |||
Chr1S:22142799..22142820 | 18/22 | Sense | off-target | rbpj.S | |||
Chr4S:57423040..57423061 | 18/22 | Sense | off-target | phkb.S | |||
Chr7S:111952824..111952845 | 18/22 | Sense | off-target | sdhb.S | |||
Chr2S:81381691..81381712 | 18/22 | Antisense | off-target | runx3.S | |||
Chr3L:29049051..29049072 | 18/22 | Antisense | off-target | pcbd2.L | |||
Chr5L:150192153..150192174 | 18/22 | Sense | off-target | lpin1.L | |||
Chr5L:159356118..159356139 | 18/22 | Antisense | off-target | runx2.L | |||
Chr9_10L:53937900..53937921 | 18/22 | Antisense | off-target | prkca.L | |||
Chr2L:180956781..180956802 | 18/22 | Sense | off-target | LOC108707772 | |||
Chr2S:167479774..167479795 | 18/22 | Antisense | off-target | LOC108709055 | |||
Chr3L:16399922..16399943 | 18/22 | Antisense | off-target | LOC108710740 | |||
Chr3L:2686571..2686592 | 18/22 | Sense | off-target | LOC108710718 | |||
Chr5L:165873447..165873468 | 18/22 | Antisense | off-target | LOC121393124 | |||
Chr5S:77505492..77505513 | 18/22 | Sense | off-target | LOC121394107 | |||
Chr8L:40658689..40658710 | 18/22 | Antisense | off-target | LOC108698386 | |||
Chr1S:192953799..192953820 | 20/22 | Antisense | unknown | ||||
Chr4L:18267568..18267589 | 20/22 | Sense | unknown | ||||
Chr8L:47722303..47722324 | 20/22 | Antisense | unknown | ||||
Chr1L:179642678..179642699 | 19/22 | Antisense | unknown | ||||
Chr1L:23197769..23197790 | 19/22 | Antisense | unknown | ||||
Chr1S:61417612..61417633 | 19/22 | Antisense | unknown | ||||
Chr2L:88548100..88548121 | 19/22 | Sense | unknown | ||||
Chr3L:49488861..49488882 | 19/22 | Sense | unknown | ||||
Chr7L:861302..861323 | 19/22 | Antisense | unknown | ||||
Chr6S:83827093..83827114 | 19/22 | Sense | unknown | ||||
Chr8L:118979088..118979109 | 19/22 | Antisense | unknown | ||||
Chr1L:152958278..152958299 | 18/22 | Antisense | unknown | ||||
Chr1L:23057050..23057071 | 18/22 | Sense | unknown | ||||
Chr1L:64981674..64981695 | 18/22 | Sense | unknown | ||||
Chr1S:2405710..2405731 | 18/22 | Sense | unknown | ||||
Chr1S:6091058..6091079 | 18/22 | Antisense | unknown | ||||
Chr2L:118132118..118132139 | 18/22 | Sense | unknown | ||||
Chr2S:25949728..25949749 | 18/22 | Sense | unknown | ||||
Chr4S:115776300..115776321 | 18/22 | Sense | unknown | ||||
Chr5S:111743884..111743905 | 18/22 | Sense | unknown | ||||
Chr6L:65770005..65770026 | 18/22 | Sense | unknown | ||||
Chr9_10L:21802659..21802680 | 18/22 | Sense | unknown | tropicalis 10.0 | Chr1:154636883..154636904 | 22/22 | Antisense | target | tbx1 |
Chr1:22075468..22075489 | 20/22 | Antisense | off-target | add1 | |||
Chr2:1127897..1127918 | 20/22 | Sense | off-target | slc22a15.1 | |||
Chr10:3894459..3894480 | 20/22 | Antisense | off-target | LOC101732123 | |||
Chr10:3896608..3896629 | 20/22 | Antisense | off-target | LOC101732123 | |||
Chr10:32211955..32211976 | 19/22 | Sense | off-target | sdk2 | |||
Chr2:8209359..8209380 | 19/22 | Antisense | off-target | gja5 | |||
Chr4:73526016..73526037 | 19/22 | Antisense | off-target | phkb | |||
Chr7:16601692..16601713 | 19/22 | Antisense | off-target | ank3 | |||
Chr8:70012597..70012618 | 19/22 | Sense | off-target | mcf2 | |||
Chr9:82150611..82150632 | 19/22 | Sense | off-target | pnkd | |||
Chr2:174931488..174931509 | 19/22 | Antisense | off-target | c2cd3 | |||
Chr5:103055130..103055151 | 19/22 | Antisense | off-target | masp1 | |||
Chr3:93078082..93078103 | 19/22 | Antisense | off-target | lingo1 | |||
Chr5:109175447..109175468 | 19/22 | Sense | off-target | kcnmb2 | |||
Chr10:43352127..43352148 | 19/22 | Sense | off-target | mtss1.2 | |||
Chr5:11866707..11866728 | 19/22 | Antisense | off-target | gpatch2 | |||
Chr1:166633634..166633655 | 19/22 | Antisense | off-target | LOC100493526 | |||
Chr2:174931488..174931509 | 19/22 | Antisense | off-target | LOC116406442 | |||
Chr2:31819215..31819236 | 18/22 | Sense | off-target | abr | |||
Chr6:61883017..61883038 | 18/22 | Sense | off-target | lsm5 | |||
Chr2:41509482..41509503 | 18/22 | Antisense | off-target | stx1a | |||
Chr2:92706339..92706360 | 18/22 | Sense | off-target | bcas3 | |||
Chr6:154076138..154076159 | 18/22 | Antisense | off-target | mfsd3 | |||
Chr8:10008148..10008169 | 18/22 | Antisense | off-target | abo.1 | |||
Chr3:79154922..79154943 | 18/22 | Sense | off-target | sema3c | |||
Chr4:10176268..10176289 | 18/22 | Sense | off-target | LOC100496429 | |||
Chr5:39945593..39945614 | 18/22 | Antisense | off-target | LOC101730793 | |||
Chr6:4449327..4449348 | 18/22 | Antisense | off-target | LOC101735118 | |||
Chr7:126781649..126781670 | 18/22 | Sense | off-target | LOC116412307 | |||
Chr7:8799639..8799660 | 18/22 | Sense | off-target | LOC100487580 | |||
Chr10:3898206..3898227 | 20/22 | Antisense | unknown | ||||
Chr1:95499155..95499176 | 19/22 | Sense | unknown | ||||
Chr10:2679676..2679697 | 19/22 | Antisense | unknown | ||||
Chr10:2953776..2953797 | 19/22 | Sense | unknown | ||||
Chr10:4687004..4687025 | 19/22 | Antisense | unknown | ||||
Chr10:4702364..4702385 | 19/22 | Antisense | unknown | ||||
Chr10:4718983..4719004 | 19/22 | Antisense | unknown | ||||
Chr10:4735147..4735168 | 19/22 | Antisense | unknown | ||||
Chr3:115644896..115644917 | 19/22 | Sense | unknown | ||||
Chr3:71527040..71527061 | 19/22 | Sense | unknown | ||||
Chr5:30224303..30224324 | 19/22 | Antisense | unknown | ||||
Chr3:116160926..116160947 | 18/22 | Sense | unknown | ||||
Chr3:44710756..44710777 | 18/22 | Antisense | unknown | ||||
Chr3:61170239..61170260 | 18/22 | Sense | unknown | ||||
Chr3:74272603..74272624 | 18/22 | Sense | unknown | ||||
Chr5:144238469..144238490 | 18/22 | Sense | unknown | ||||
Chr5:61271273..61271294 | 18/22 | Sense | unknown | ||||
Chr6:112669968..112669989 | 18/22 | Sense | unknown | ||||
Chr6:150424613..150424634 | 18/22 | Antisense | unknown | ||||
Chr6:1991768..1991789 | 18/22 | Sense | unknown | ||||
Chr6:3550110..3550131 | 18/22 | Antisense | unknown | ||||
Chr7:10851774..10851795 | 18/22 | Antisense | unknown | ||||
Chr7:38086034..38086055 | 18/22 | Sense | unknown | ||||
Chr7:58204357..58204378 | 18/22 | Antisense | unknown | ||||
Chr8:144561194..144561215 | 18/22 | Sense | unknown | ||||
Chr9:1454175..1454196 | 18/22 | Sense | unknown | ||||
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
RIPPLY3 is a retinoic acid-inducible repressor required for setting the borders of the pre-placodal ectoderm., Development 2012 |
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???morpholino.displaySummary.papersRecent??? | |||||||
???morpholino.displaySummary.papersAll??? |