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Summary Attributions Wiki
XB-MORPHOLINO-17249666
Morpholino Name: h3-3a MO3
Synonyms: H3.3, h3f3a MO3
Target mRNA: h3-3a

Morpholino Type: translation blocking morpholino
Sequence: 5' GGTCTGCTTTGTACGGGCCATTTCC 3'

Source: Gene Tools LLC


Target mRNA tropicalis
Identities 23/25
genome
MO
 
5' GGAAATGGCCCGTACCAAGCAGACA 3'
   ||||||||||||||| |||||||| 
3' CCTTTACCGGGCATGTTTCGTCTGG 5'
      
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr5S:12195928..12195952 25/25 Sense off-target h3-5.L
Chr5L:17923210..17923234 23/25 Antisense off-target LOC108716488
Chr9_10S:94026060..94026084 21/25 Sense off-target h3c13.S
Chr9_10S:71021938..71021962 21/25 Sense off-target itprid2.S
Chr9_10L:107985153..107985177 21/25 Sense off-target LOC108701569
Chr3S:123467854..123467878 21/25 Antisense unknown
Chr9_10L:133833222..133833246 21/25 Antisense unknown
Chr9_10L:134263732..134263756 21/25 Sense unknown
Chr9_10L:135043477..135043501 21/25 Antisense unknown
tropicalis 10.0 Chr5:8209996..8210020 23/25 Sense target h3-3a
Chr9:3506190..3506214 22/25 Antisense off-target h2ac14
Chr9:2965517..2965541 22/25 Sense off-target LOC100486653
Chr9:2989985..2990009 22/25 Sense off-target LOC100486653
Chr9:2989985..2990009 22/25 Sense off-target LOC100493706
Chr9:3506190..3506214 22/25 Antisense off-target LOC105945443
Chr9:3506190..3506214 22/25 Antisense off-target LOC101730986
Chr9:4894196..4894220 21/25 Sense off-target h2aj
Chr3:135234032..135234056 21/25 Antisense off-target h3c14
Chr10:44806669..44806693 21/25 Sense off-target h3-3b
Chr9:2727438..2727462 21/25 Sense off-target h3c13
Chr3:135383980..135384004 21/25 Sense off-target LOC100493093
Chr3:135383980..135384004 21/25 Sense off-target LOC108646287
Chr3:135396651..135396675 21/25 Antisense off-target LOC116409810
Chr3:135488061..135488085 21/25 Antisense off-target LOC101734776
Chr3:135488061..135488085 21/25 Antisense off-target LOC108646286
Chr6:4852645..4852669 21/25 Sense off-target LOC101733242
Chr6:5109905..5109929 21/25 Antisense off-target LOC100497127
Chr6:5269748..5269772 21/25 Sense off-target LOC116411629
Chr3:135506145..135506169 21/25 Antisense off-target LOC100496129
Chr3:135612777..135612801 21/25 Antisense off-target LOC116409812
Chr3:135618393..135618417 21/25 Sense off-target LOC116409811
Chr3:135653766..135653790 21/25 Sense off-target LOC100495338
Chr3:135661764..135661788 21/25 Antisense off-target LOC100493041
Chr3:135763486..135763510 21/25 Antisense off-target LOC100495788
Chr6:4059550..4059574 21/25 Sense off-target LOC101734931
Chr6:4059550..4059574 21/25 Sense off-target LOC101732029
Chr6:4245940..4245964 21/25 Antisense off-target LOC100487139
Chr6:4252505..4252529 21/25 Sense off-target LOC100496027
Chr6:4308188..4308212 21/25 Antisense off-target LOC100486720
Chr6:4852645..4852669 21/25 Sense off-target LOC116411630
Chr9:2677794..2677818 21/25 Sense off-target LOC101731074
Chr9:2727438..2727462 21/25 Sense off-target LOC100488698
Chr9:2833101..2833125 21/25 Sense off-target LOC101731959
Chr6:5288981..5289005 21/25 Sense off-target LOC100493100
Chr9:2833101..2833125 21/25 Sense off-target LOC108648869
Chr9:2891951..2891975 21/25 Antisense off-target LOC100493036
Chr9:2954383..2954407 21/25 Sense off-target LOC116407589
Chr9:2954383..2954407 21/25 Sense off-target LOC100494884
Chr9:4257125..4257149 21/25 Antisense off-target LOC116406473
Chr9:4565865..4565889 21/25 Sense off-target LOC100485665
Chr9:4578575..4578599 21/25 Sense off-target LOC105947137
Chr9:4747342..4747366 21/25 Antisense off-target LOC100487628
Chr9:4747342..4747366 21/25 Antisense off-target LOC116406469
Chr9:4803197..4803221 21/25 Sense off-target LOC100487628
Chr9:4803197..4803221 21/25 Sense off-target LOC108645245
Chr9:4807104..4807128 21/25 Sense off-target LOC100487628
Chr9:4807104..4807128 21/25 Sense off-target LOC101733224
Chr9:4894196..4894220 21/25 Sense off-target LOC101730415
Chr9:4910107..4910131 21/25 Sense off-target LOC116407578
Chr9:4974892..4974916 21/25 Sense off-target LOC100497614
Chr9:4974892..4974916 21/25 Sense off-target LOC116407579
Chr9:4988963..4988987 21/25 Sense off-target LOC100497614
Chr9:5024642..5024666 21/25 Antisense off-target LOC101730642
Chr9:5558098..5558122 21/25 Antisense off-target LOC100497406
Chr9:5608824..5608848 21/25 Antisense off-target LOC116407737
Chr9:5608824..5608848 21/25 Antisense off-target LOC116407634
Chr9:5615682..5615706 21/25 Antisense off-target LOC116407634
Chr3:135252764..135252788 21/25 Antisense unknown
Chr9:2809832..2809856 21/25 Sense unknown
Chr9:2819323..2819347 21/25 Sense unknown
Chr9:4262075..4262099 21/25 Sense unknown
Chr9:5010741..5010765 21/25 Sense unknown
Publications
???morpholino.displaySummary.papersFirst??? A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus., Cell Rep 2012                                        
???morpholino.displaySummary.papersRecent??? Histone variant H3.3 residue S31 is essential for Xenopus gastrulation regardless of the deposition pathway., Nat Commun 2020                  
???morpholino.displaySummary.papersAll???