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XB-MORPHOLINO-17249105
Morpholino Name:
abce1 MO2
Synonyms: ABCE1 atg
Target mRNA: abce1
Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' TGGTAAGTTTGTCTGCCATGTTGTC 3'
Source: Gene Tools LLC
Synonyms: ABCE1 atg
Target mRNA: abce1
Morpholino Type: translation blocking morpholino (ATG)
Sequence: 5' TGGTAAGTTTGTCTGCCATGTTGTC 3'
Source: Gene Tools LLC
Target mRNA | tropicalis | laevis.L | laevis.S | ||||
Identities | 22/25 | 23/25 | 25/25 | ||||
genome
MO
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5' GACAATATGGCAGACAAACTAACGA 3' ||||| |||||||||||||| || | 3' CTGTTGTACCGTCTGTTTGAATGGT 5' |
5' GGCAATATGGCAGACAAACTTACCA 3' | ||| ||||||||||||||||||| 3' CTGTTGTACCGTCTGTTTGAATGGT 5' |
5' GACAACATGGCAGACAAACTTACCA 3' ||||||||||||||||||||||||| 3' CTGTTGTACCGTCTGTTTGAATGGT 5' |
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Genomic Alignments | Position | Identity | Strand | Target | Target mRNA | ||
laevis 10.1 | Chr1S:47729170..47729194 | 25/25 | Antisense | target | abce1.S | ||
Chr1L:62569502..62569526 | 23/25 | Antisense | target | abce1.L | |||
Chr4L:41761371..41761395 | 21/25 | Antisense | off-target | chd9.L | |||
Chr5L:52785343..52785367 | 21/25 | Antisense | off-target | smyd3.L | |||
Chr1L:189371259..189371283 | 21/25 | Sense | off-target | fbxl17.L | |||
Chr5L:95593572..95593596 | 21/25 | Sense | off-target | col12a1.L | |||
Chr1L:75437291..75437315 | 21/25 | Sense | unknown | tropicalis 10.0 | Chr1:59061042..59061066 | 22/25 | Antisense | target | abce1 |
Chr3:130028040..130028064 | 21/25 | Antisense | off-target | egr3 | |||
Chr4:89609680..89609704 | 21/25 | Sense | off-target | ptprf | |||
Chr3:11082591..11082615 | 21/25 | Antisense | off-target | c3h12orf4 | |||
Publications | |||||||
???morpholino.displaySummary.papersFirst??? |
The essential vertebrate ABCE1 protein interacts with eukaryotic initiation factors., J Biol Chem 2006 |
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???morpholino.displaySummary.papersRecent??? | |||||||
???morpholino.displaySummary.papersAll??? |