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Revealing mitf functions and visualizing allografted tumor metastasis in colorless and immunodeficient Xenopus tropicalis., Ran R, Li L, Xu T, Huang J, He H, Chen Y., Commun Biol. March 5, 2024; 7 (1): 275.                                

Noncanonical function of folate through folate receptor 1 during neural tube formation., Balashova OA, Panoutsopoulos AA, Visina O, Selhub J, Knoepfler PS, Borodinsky LN., Nat Commun. February 22, 2024; 15 (1): 1642.                                

A CRISPR-Cas9-mediated versatile method for targeted integration of a fluorescent protein gene to visualize endogenous gene expression in Xenopus laevis., Mochii M, Akizuki K, Ossaka H, Kagawa N, Umesono Y, Suzuki KT., Dev Biol. February 1, 2024; 506 42-51.                                

ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation., Wang C, Liu Z, Zeng Y, Zhou L, Long Q, Hassan IU, Zhang Y, Qi X, Cai D, Mao B, Lu G, Sun J, Yao Y, Deng Y, Zhao Q, Feng B, Zhou Q, Chan WY, Zhao H., EMBO Rep. February 1, 2024; 25 (2): 646-671.                                          

Simplifying Genotyping of Mutants from Genome Editing with a Parallel qPCR-Based iGenotype Index., Fu L, Wang S, Liu L, Shibata Y, Okada M, Luu N, Shi YB., Cells. January 29, 2024; 13 (3):           

SMC5 Plays Independent Roles in Congenital Heart Disease and Neurodevelopmental Disability., O'Brien MP, Pryzhkova MV, Lake EMR, Mandino F, Shen X, Karnik R, Atkins A, Xu MJ, Ji W, Konstantino M, Brueckner M, Ment LR, Khokha MK, Jordan PW., Int J Mol Sci. December 28, 2023; 25 (1):                         

Mutations in the histone methyltransferase Ezh2 drive context-dependent leukemia in Xenopus tropicalis., Tulkens D, Boelens M, Naert T, Carron M, Demuynck S, Dewaele S, Van Isterdael G, Creytens D, Pieters T, Goossens S, Van Vlierberghe P, Vleminckx K., Leukemia. December 1, 2023; 37 (12): 2404-2413.

Mitochondrial leak metabolism induces the Spemann-Mangold Organizer via Hif-1α in Xenopus., MacColl Garfinkel A, Mnatsakanyan N, Patel JH, Wills AE, Shteyman A, Smith PJS, Alavian KN, Jonas EA, Khokha MK., Dev Cell. November 20, 2023; 58 (22): 2597-2613.e4.                        

Bi-allelic ACBD6 variants lead to a neurodevelopmental syndrome with progressive and complex movement disorders., Kaiyrzhanov R, Rad A, Lin SJ, Bertoli-Avella A, Kallemeijn WW, Godwin A, Zaki MS, Huang K, Lau T, Petree C, Efthymiou S, Ghayoor Karimiani E, Hempel M, Normand EA, Rudnik-Schöneborn S, Schatz UA, Baggelaar MP, Ilyas M, Sultan T, Alvi JR, Ganieva M, Fowler B, Aanicai R, Akay Tayfun G, Al Saman A, Alswaid A, Amiri N, Asilova N, Shotelersuk V, Yeetong P, Azam M, Babaei M, Bahrami Monajemi G, Mohammadi P, Samie S, Banu SH, Basto JP, Kortüm F, Bauer M, Bauer P, Beetz C, Garshasbi M, Hameed Issa A, Eyaid W, Ahmed H, Hashemi N, Hassanpour K, Herman I, Ibrohimov S, Abdul-Majeed BA, Imdad M, Isrofilov M, Kaiyal Q, Khan S, Kirmse B, Koster J, Lourenço CM, Mitani T, Moldovan O, Murphy D, Najafi M, Pehlivan D, Rocha ME, Salpietro V, Schmidts M, Shalata A, Mahroum M, Talbeya JK, Taylor RW, Vazquez D, Vetro A, Waterham HR, Zaman M, Schrader TA, Chung WK, Guerrini R, Lupski JR, Gleeson J, Suri M, Jamshidi Y, Bhatia KP, Vona B, Schrader M, Severino M, Guille M, Tate EW, Varshney GK, Houlden H, Maroofian R., Brain. November 10, 2023;


Generating Retinal Injury Models in Xenopus Tadpoles., Parain K, Donval A, Chesneau A, Lun JX, Borday C, Perron M., J Vis Exp. October 13, 2023; (200):


Rare variants in CAPN2 increase risk for isolated hypoplastic left heart syndrome., Blue EE, White JJ, Dush MK, Gordon WW, Wyatt BH, White P, Marvin CT, Helle E, Ojala T, Priest JR, Jenkins MM, Almli LM, Reefhuis J, Pangilinan F, Brody LC, McBride KL, Garg V, Shaw GM, Romitti PA, Nembhard WN, Browne ML, Werler MM, Kay DM, National Birth Defects Prevention Study, University of Washington Center for Mendelian Genomics, Mital S, Chong JX, Nascone-Yoder NM, Bamshad MJ., HGG Adv. October 12, 2023; 4 (4): 100232.            

The USP46 complex deubiquitylates LRP6 to promote Wnt/β-catenin signaling., Ng VH, Spencer Z, Neitzel LR, Nayak A, Loberg MA, Shen C, Kassel SN, Kroh HK, An Z, Anthony CC, Bryant JM, Lawson A, Goldsmith L, Benchabane H, Hansen AG, Li J, D'Souza S, Lebensohn AM, Rohatgi R, Weiss WA, Weiss VL, Williams C, Hong CC, Robbins DJ, Ahmed Y, Lee E., Nat Commun. October 5, 2023; 14 (1): 6173.                                

Phenotype-genotype relationships in Xenopus sox9 crispants provide insights into campomelic dysplasia and vertebrate jaw evolution., Hossain N, Igawa T, Suzuki M, Tazawa I, Nakao Y, Hayashi T, Suzuki N, Ogino H., Dev Growth Differ. October 1, 2023; 65 (8): 481-497.                  

Protocols for transgenesis at a safe harbor site in the Xenopus laevis genome using CRISPR-Cas9., Shibata Y, Okumura A, Mochii M, Suzuki KT., STAR Protoc. September 15, 2023; 4 (3): 102382.            

Pleiotropy of autism-associated chromatin regulators., Lasser M, Sun N, Xu Y, Wang S, Drake S, Law K, Gonzalez S, Wang B, Drury V, Castillo O, Zaltsman Y, Dea J, Bader E, McCluskey KE, State MW, Willsey AJ, Willsey HR., Development. July 15, 2023; 150 (14):                   

CFAP45, a heterotaxy and congenital heart disease gene, affects cilia stability., Deniz E, Pasha M, Guerra ME, Viviano S, Ji W, Konstantino M, Jeffries L, Lakhani SA, Medne L, Skraban C, Krantz I, Khokha MK., Dev Biol. July 1, 2023; 499 75-88.                              

Competitive PCR with dual fluorescent primers enhances the specificity and reproducibility of genotyping animals generated from genome editing., Fu L, Ma E, Okada M, Shibata Y, Shi YB., Cell Biosci. May 11, 2023; 13 (1): 83.

RAF1 deficiency causes a lethal syndrome that underscores RTK signaling during embryogenesis., Wong S, Tan YX, Loh AYT, Tan KY, Lee H, Aziz Z, Nelson SF, Özkan E, Kayserili H, Escande-Beillard N, Reversade B., EMBO Mol Med. May 8, 2023; 15 (5): e17078.                

Xenbase: key features and resources of the Xenopus model organism knowledgebase., Fisher M, James-Zorn C, Ponferrada V, Bell AJ, Sundararaj N, Segerdell E, Chaturvedi P, Bayyari N, Chu S, Pells T, Lotay V, Agalakov S, Wang DZ, Arshinoff BI, Foley S, Karimi K, Vize PD, Zorn AM., Genetics. May 4, 2023; 224 (1):             

Dual leucine zipper kinase is necessary for retinal ganglion cell axonal regeneration in Xenopus laevis., Fague L, Marsh-Armstrong N., PNAS Nexus. May 1, 2023; 2 (5): pgad109.

Pleiotropic role of TRAF7 in skull-base meningiomas and congenital heart disease., Mishra-Gorur K, Barak T, Kaulen LD, Henegariu O, Jin SC, Aguilera SM, Yalbir E, Goles G, Nishimura S, Miyagishima D, Djenoune L, Altinok S, Rai DK, Viviano S, Prendergast A, Zerillo C, Ozcan K, Baran B, Sencar L, Goc N, Yarman Y, Ercan-Sencicek AG, Bilguvar K, Lifton RP, Moliterno J, Louvi A, Yuan S, Deniz E, Brueckner M, Gunel M., Proc Natl Acad Sci U S A. April 18, 2023; 120 (16): e2214997120.                                            

The heparan sulfate modification enzyme, Hs6st1, governs Xenopus neuroectodermal patterning by regulating distributions of Fgf and Noggin., Yamamoto T, Kaneshima T, Tsukano K, Michiue T., Dev Biol. April 1, 2023; 496 87-94.

Automated multi-sample DNA extraction for genotyping live Xenopus embryos., Alles N, Guille M, Górecki DC., Dev Dyn. March 1, 2023; 252 (3): 429-438.                        

Mink1 regulates spemann organizer cell fate in the xenopus gastrula via Hmga2., Colleluori V, Khokha MK., Dev Biol. March 1, 2023; 495 42-53.                            

HNF1B Alters an Evolutionarily Conserved Nephrogenic Program of Target Genes., Grand K, Stoltz M, Rizzo L, Röck R, Kaminski MM, Salinas G, Getwan M, Naert T, Pichler R, Lienkamp SS., J Am Soc Nephrol. March 1, 2023; 34 (3): 412-432.                          

Two odorant receptors regulate 1-octen-3-ol induced oviposition behavior in the oriental fruit fly., Xu L, Jiang HB, Yu JL, Pan D, Tao Y, Lei Q, Chen Y, Liu Z, Wang JJ., Commun Biol. February 15, 2023; 6 (1): 176.

The termination of UHRF1-dependent PAF15 ubiquitin signaling is regulated by USP7 and ATAD5., Miyashita R, Nishiyama A, Qin W, Chiba Y, Kori S, Kato N, Konishi C, Kumamoto S, Kozuka-Hata H, Oyama M, Kawasoe Y, Tsurimoto T, Takahashi TS, Leonhardt H, Arita K, Nakanishi M., Elife. February 3, 2023; 12                                   

The H2A.Z and NuRD associated protein HMG20A controls early head and heart developmental transcription programs., Herchenröther A, Gossen S, Friedrich T, Reim A, Daus N, Diegmüller F, Leers J, Sani HM, Gerstner S, Schwarz L, Stellmacher I, Szymkowiak LV, Nist A, Stiewe T, Borggrefe T, Mann M, Mackay JP, Bartkuhn M, Borchers A, Lan J, Hake SB., Nat Commun. January 28, 2023; 14 (1): 472.                                                    

Development and metamorphosis in frogs deficient in the thyroid hormone transporter MCT8., Sterner ZR, Jabrah A, Shaidani NI, Horb ME, Dockery R, Paul B, Buchholz DR., Gen Comp Endocrinol. January 15, 2023; 331 114179.              

Genome-wide analysis of copy-number variation in humans with cleft lip and/or cleft palate identifies COBLL1, RIC1, and ARHGEF38 as clefting genes., Lansdon LA, Dickinson A, Arlis S, Liu H, Hlas A, Hahn A, Bonde G, Long A, Standley J, Tyryshkina A, Wehby G, Lee NR, Daack-Hirsch S, Mohlke K, Girirajan S, Darbro BW, Cornell RA, Houston DW, Murray JC, Manak JR., Am J Hum Genet. January 5, 2023; 110 (1): 71-91.                          

Tissue-specific expression of carbohydrate sulfotransferases drives keratan sulfate biosynthesis in the notochord and otic vesicles of Xenopus embryos., Yasuoka Y., Front Cell Dev Biol. January 1, 2023; 11 957805.                                          

A CRISPR/Cas-Based Method for Precise DNA Integration in Xenopus laevis Oocytes Followed by Intracytoplasmic Sperm Injection (ICSI) Fertilization., Martin SA., Methods Mol Biol. January 1, 2023; 2633 131-143.

CRISPR/Cas9 Gene Disruption Studies in F0 Xenopus Tadpoles: Understanding Development and Disease in the Frog., Abu-Daya A, Godwin A., Methods Mol Biol. January 1, 2023; 2633 111-130.        

CRISPR-Cas9-Based Functional Analysis in Amphibians: Xenopus laevis, Xenopus tropicalis, and Pleurodeles waltl., Suzuki M, Iida M, Hayashi T, Suzuki KT., Methods Mol Biol. January 1, 2023; 2637 341-357.        

An Efficient CRISPR-Cas9 Method to Knock Out MiRNA Expression in Xenopus Tropicalis., Godden AM, Antonaci M, Wheeler GN., Methods Mol Biol. January 1, 2023; 2630 231-241.    

Identification of novel genes including NAV2 associated with isolated tall stature., Weiss B, Ott T, Vick P, Lui JC, Roeth R, Vogel S, Waldmüller S, Hoffmann S, Baron J, Wit JM, Rappold GA., Front Endocrinol (Lausanne). January 1, 2023; 14 1258313.          

The G213D variant in Nav1.5 alters sodium current and causes an arrhythmogenic phenotype resulting in a multifocal ectopic Purkinje-related premature contraction phenotype in human-induced pluripotent stem cell-derived cardiomyocytes., Calloe K, Geryk M, Freude K, Treat JA, Vold VA, Frederiksen HRS, Broendberg AK, Frederiksen TC, Jensen HK, Cordeiro JM., Europace. December 9, 2022; 24 (12): 2015-2027.                

Homology-Directed Repair by CRISPR-Cas9 Mutagenesis in Xenopus Using Long Single-Stranded Donor DNA Templates via Simple Microinjection of Embryos., Nakayama T, Grainger RM, Cha SW., Cold Spring Harb Protoc. December 1, 2022; 2022 (12): 606-615.

Hnf1b renal expression directed by a distal enhancer responsive to Pax8., Goea L, Buisson I, Bello V, Eschstruth A, Paces-Fessy M, Le Bouffant R, Chesneau A, Cereghini S, Riou JF, Umbhauer M., Sci Rep. November 19, 2022; 12 (1): 19921.            

cyp21a2 Knockout Tadpoles Survive Metamorphosis Despite Low Corticosterone., Paul B, Shewade LH, Buchholz DR., Endocrinology. November 14, 2022; 164 (1):               

Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E, Kostiuk V, Zhu J, Cecilia Guerra M, Tyan L, Hwang W, Camacho-Aguilar E, Caplan MJ, Zenisek D, Warmflash A, Owens NDL, Khokha MK., Nat Commun. November 5, 2022; 13 (1): 6681.                                            

Manipulating the microbiome alters regenerative outcomes in Xenopus laevis tadpoles via lipopolysaccharide signalling., Chapman PA, Gilbert CB, Devine TJ, Hudson DT, Ward J, Morgan XC, Beck CW., Wound Repair Regen. November 1, 2022; 30 (6): 636-651.                        

Appropriate Amounts and Activity of the Wilms' Tumor Suppressor Gene, wt1, Are Required for Normal Pronephros Development of Xenopus Embryos., Shiraki T, Hayashi T, Ozue J, Watanabe M., J Dev Biol. October 29, 2022; 10 (4):           

Insights to improve the plant nutrient transport by CRISPR/Cas system., Ceasar SA, Maharajan T, Hillary VE, Ajeesh Krishna TP., Biotechnol Adv. October 1, 2022; 59 107963.

Functional analysis of a bitter gustatory receptor highly expressed in the larval maxillary galea of Helicoverpa armigera., Chen Y, Wang PC, Zhang SS, Yang J, Li GC, Huang LQ, Wang CZ., PLoS Genet. October 1, 2022; 18 (10): e1010455.    

Engraftment of Allotransplanted Tumor Cells in Adult rag2 Mutant Xenopus tropicalis., Tulkens D, Dimitrakopoulou D, Boelens M, Van Nieuwenhuysen T, Demuynck S, Toussaint W, Creytens D, Van Vlierberghe P, Vleminckx K., Cancers (Basel). September 20, 2022; 14 (19):


CRISPR/Cas9-based simple transgenesis in Xenopus laevis., Shibata Y, Suzuki M, Hirose N, Takayama A, Sanbo C, Inoue T, Umesono Y, Agata K, Ueno N, Suzuki KT, Mochii M., Dev Biol. September 1, 2022; 489 76-83.                                                        

Maternal Wnt11b regulates cortical rotation during Xenopus axis formation: analysis of maternal-effect wnt11b mutants., Houston DW, Elliott KL, Coppenrath K, Wlizla M, Horb ME., Development. September 1, 2022; 149 (17):                                   

GJA1 depletion causes ciliary defects by affecting Rab11 trafficking to the ciliary base., Jang DG, Kwon KY, Kweon YC, Kim BG, Myung K, Lee HS, Young Park C, Kwon T, Park TJ., Elife. August 25, 2022; 11                                       

Functions of block of proliferation 1 during anterior development in Xenopus laevis., Gärtner C, Meßmer A, Dietmann P, Kühl M, Kühl SJ., PLoS One. August 2, 2022; 17 (8): e0273507.                        

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