Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
Simple Synteny Search
JBrowse2 Tracks
JBrowse2 X. laevis v10.1 L vs S synteny
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_041578656.1 PREDICTED: Xenopus laevis bromodomain adjacent to zinc finger domain 2B S homeolog (baz2b.S), transcript variant X4, mRNA GCTTGTTTGCTTGGTGTACAGCAGAGCATTATGTTGTTGAGAGCTTGCTTGCCTGGTGTGCAGAAGAGTA GTGCATTTTGGAGCTTGTTTCTGTACAGCAGTAGAGTATTACATTGATGCTGCGAGTTTGTTTCTGTACA GCAGAGTATTACATTGTTGCTGTGAGCTTGTTGGCTGACGTCACTTCGGGTTCCTGGAGCTTTTGCCTTG AAGTGAAGCTGAATAATAAACCTTGGTAAGAATCTCCTTGAATGTGCTGCACAGACACAGACACACACTG AGGAAGCGGCTCCGTTCCACCCTCTGCCTTTATGTCCCTTCCCAGCGCTCCTGGGGAAGGAGGAACGGAC ACACACAGCAGATTCCCCGTCCATCACTTTCCCCAAAAAGTAGCCCTCATCCTCTGCACTGGAAAGACCC GGGACCCCGTCATCTCTGCGGAATTGAAGGACAGTGAGATTTAAAGATATGGGAGCTCCTGATTCAAAGT AATTCTGGGGTATCAGTTCCCTGAATTCAGCATTGGAGCCAGAGATAAGTAAAATCAAGAGGTCCAATAT TGAGATAAAGCAAAGTTTGAAAACGGTGATGCCATAGAACTGACCACATTCTTCACAATATGGAATCTGC AGAGAGGTTAACAACATCAACCCCATCATCAGCAACTTCGTCCTCGCCTTCAACTCCATCTGTCGCTGTA GTTGTTTCTAAAGGAGGCCTTTCTGCTGGAGTTACACCTCTGAGCTCCACAATCACTGCTTGTGGTAGGT CACAGAAACTTCTAGGACACTTGTTCAGAACATCTGGAGATCAGCCGTTTAATCTGTCGAGTGCCTTTCC TATGGTCAGCCACCCCATTTTTGGCCTTCATGCAGCCAGCTCAGGGCATTCGGAATTCGGTGGTTTGGGG ACACTAGGTACACCCACCGCCTTAGCTGCACATCCTCAACTTGCACCTTTTCCAGAATGGTGGCGTGCGA CCGACGCACACACTCGTGCTGCTTTTTTCCCTCCACTGCTTGGGATTCCTCCTCTGTTCACTCCACCAAC CCCAAACCATGATTCTTCTTTCCACCTGCGCAACTCTGTGAAGAATGGCCGCGGCATCGCAGAGAAAGGC ATGAATGGATCCCTGAATGGAAGCAGCCCTACATTAGTAACCAGTAACTGCACATCCGTACTGTCAACTA CAAGCACCAGCACTGTTGGGCAAACAAAGAGTGTGGCCTCTGGGGCAAAAGGGAGGCTTTCTAAGGAGGA GCAAAGCAAAGCAGATGGCAGAAGTGAAAAAACTAAAGACAAGCAGAAGCAAAGAAAAAAAGCTGCTGAA AGCTCCAGCTCCAGTGATTCTGGTTCATCTTCTGATACATCAAGCGATGGTGTTAGTAGCAGCGATTCTG ATGATTTGGAGGAGGAAGAAGACCAAAGCATTGAAGAAAGTGATGATGATGATGATGATTCAGATTCTGA GAGTGAAGCACAAACTAAAAATAAGAATAAGGTGCTATTACATAACCTGAAAACTGATGGGAACAAACCC GAGAAGTCCCAGGAGAAGAGAACTCACCAGCAGATACCTCTTATTTCAGACTCCCAGACTCACGTACCAT TCCAGTCCCAGCAAAAACATCCTCAGGTTTTGTCCCAGCATCTTCCCTTTGCTTTCCCAAGCTCTCAGGC CAAGGAGGAGACTGTGAACAAACACACAAGTGTCATTCAGTGTACAGGACTGATCTCAAATGTGAAGCCT TTGACTCTGCTAAATCACTCCAACAAGGATAACTGCTTAAAGCTTGGAACTCCTTCCACTGATGGAGTTA AAGTAGGGACTAAAAATACCTCTGAAGAATCTGCACCTAGTGACTTGAGAATAAAAAAAAAGGATCAACA CAAGGCAACATTCCCAGCACATGTAAGCAAGCCACAGGAGAGCTCCAAGCACCAGAAGAAGTCATTTGCA GGTTTGCAAGTGTCTAAGTCTCCCTACAGTTCTTTAAGTCCCCATAAAACAGAAAATAACCATTCAAATC CATTCTTGGCAAATGCACTGCTAGGAAACAATCACCCCAATGGGGTCTTACCAAACATTATCCAAGATGT TCCCCTTGCACTTACCACCAAAGCAAAGAGACAAGGTAAACTAAATGACAGTTCTGCATCTTCTCCTGGC TCCCAGTTTTCCTCTCCAATAAATCTGTGTTCTTCAGTGAGAAAGACTTCTTCCAGTCAGTCTTTACTTG GGCCCACCAACACTCCAGTTCTGCAAAGTATCTGTAAAGAGAAACCCCCGGGCAAACCTAATTCACCAGC AATAAAGACTTCACATCGTGTCAGTGCCGCTAAGTCATTATTAGATAAATTCAGAGGGGCGGACTCTGAC ATTCCTAGCAGCAAGGATTCTGATGACTCTAATGAGGAGGAGGAGGAAGATGATGATGAGGACGATGAAG AAGAGGATGAAGATGATGAAGAAGATGATTCTGACAGTCAGTCAGAGTCAGACAGTAATTCGGAATCTGA TTCAGATGGATCAGAAGAAGATGATGATAAGGATCAAGATGACTCAGACAGTGACACAGAAGGGGAAAAA ACTCCATCAAAACTTAACAAAACCGCTCCATCCATGAATAGCACAAGCAATAGTATTACTGCGCACTCCA CTCCCCTAAACCTGCAGGTTATAAAGAACCCTGGATCTGCTCCTGTCTCCCTGTGTCCTGAAGCTCAGAC CCAAGAATTTCTTGCCTCATCTTCAACGCTTAGCCCAAGTACACCATGTGGTTCTGGCAAAAGAAGAAAA GTAACTGATGAACATGAATTGGGCATTCCATTAAAATATGGCTGGCAGAGAGAAACAAGAATAAAGAACT TTAGCGGTCGTCTTCAAGGGGAAGTGAACTATTATGCTCCATGTGGCAAGAAATTCCGACAGTACCCAGA AGTAATGAAGTATCTCAGCAGAAATGGAATAATGGATATCTCAAGGGACAATTTCAGCTTCAGTGCAAAA ATAAGAGTGGGTGACTTCTATGAAGCCAGAGATGGACCACAGGGAATGCAGTGGTATCTTCTGAAAGAGG AAGAAATAGTGCCACGGATCCGGGCCATGGAAGGACGTAGAGGCCGGCCTCCCAACCCAGACAAGAAGCT GGCTAGGGAGGAATCAAGGATGAGACGAAGGAAAGGGCGTCCACCTAATGTAGGAAGTGCTGATTTTGTT GTCAATGATGATGCCAAGTTGTTAAGAAAACTGCAGGCACAAGAAATCGCAAGACAAGCTGCACAAATAA AGCTTCTCCGCAAGCTACAAAGGCAGGAACAGGCTCGAGCTGCCAAAGAAGCAAAGAAACAGCAGGCTAA AATGGCTGCAGAGGAGAAGAGGAAGCAAAAGGAGCAAATTAAGATCCTGAAACAACAGGAAAAAATTAAA AGAATTGAGCAAGTAAGAATGGAAAAAGAACTTCGTGCCCAACAAATTCTTGAGGCTAAAAAGAAAAAGA AGGAAGAAGCAGCAATTGCCAGAATTATGGAGGCCAAGAAACGAATAAAGGCAAAGGAAATGAGACGGCA GCAGGCAGTGCTACTGAAACACCAGGAGTTGGAGAGGCATAGACTAGATATGGTATGGGAACGAGAGAGG AGGAGGCAACATGTTATGCTACTGAAAGCTGTGGAAGCCAGAAAAAAAGCTGAAGAAAGGGAACGTTTAA AGCAAGAAAAACAGGATGAGAAAAGGTTAAATAAAGAACGTAAGCTTGAACAACGTAGGCTGGAGCTGGA GCTGGCAAAGGAGCTGAAGAAGCCAACTGAAGATATGTGTCTTGCAGACCAGAAGCCTTTTCCAGAACTG CCTCGAATCCCTGGACTTGTTCTGTCTGGCAGCACATTCTCCAATTGCCTCATGGTTGTACAGTTTCTCC GGAACTTTGGCAAAGTGTTGGATTTCGATATGCACAAGGACATTCCTACGCTAAGTGTTCTCCAAGAAGG CTTATTGAATATGGGAGACAGCATGGGAGAAGTGCAGGACTTACTTGTGCGGCTGCTATCTGTTGCTGTT TGTGACCCAGGAGTCCCACCAGGATATAAGGCCAAAACAGCTCTTGGGGAACATATATTGAATATTGGGA TTAACCGGGACAACGTTTCTGAGGTGCTTCAGATCTTCATGGAAGCTCACTGTGGACAGACGGACATTAC AGAAAGCCTCAAGACCAAAGCTTTTCAGGCGCACACTCCAGAACAGAAATCCACAATTCTTGCTTTCCTG GTTAATGAGCTAGCATGTAGTAAAAGTGTTGTCAGTGAAATCGATAAAAACATTGACCACATGTCAAATC TAAGAAAAGATAAATGGATGGTTGAAGGCAAACTTCGCAAGCTTAGAATGATCCATGCTAAAAAGACAGG GAAAAAAGAATCCACAGCTGGGAGTGAAGGCAGCGAGGAGCAGCAATCTTTAGGAACACCTACTCAAGGG CGCAAGCGAAGGCGGAAGGGAGCAGACAGCGACTATGATGACGACGACGACGATGATGATAGCGATGATC AAGCAGAAGATGAAGATGAGGAAGATGAGGAAAAAAAGGGCAAAAAAGTGGAAACTTGTGATGATGAGGA TGATGGAGATCAGACAGCCACAGTGGAGGAATTAGAAAAGCAGATCGACAAATTGCTTAAGCAACAAAAT CAATACAGGAAGAAGCTGTTTGAGTCTTCCCATTGTCTTCGGTCAATGATGTTTGGTCAGGATCGTTACA GGAGAAGGTACTGGATCCTTCCTCAGTGTGGTGGAATGTTTGTGGAAGGCATGCAAAGTGGTGAAGGTCC AGAAGAACTGGCAAAAGAAAGAGAGAGGCAAAAGGCAGCCGAAAATATCCAGATAAAAGAAGAGATGCTT GAAAGCTATGAAGAGAAAGTAAACTGTTTGAATTCTGGTAACAGGGACCAAAAGGATAAAGACAGCACAA ATTTATTCCTTCAAAAACCTGGTTCGTTCTCAAAGTTGAGCAAACTGCTGGAAGTGGCCAAAATGTCCCC AGAAATGGATGTTTTAGCCCATAAAGCAAGTGTTTCACCAAATGTGGGTTCCTTACCATACAAGAATAAC TGTAGAGCCACTCCCAATAACCTGCAGCCAAGTACATCCCAGGGCAATACCGAGAAGCAGAATTCAAGTT CTTTTACACCACCTTTAAGTGGATCAGGAAAGTTTTCTAATTCGCCAGTGATTCCCAATGAGCAGCTGCT AAAAACGCTCACGGACAAAAACAGGCAGTGGTTCAGTCTTCTTCCCAGGACACCATGCGATGACACGTCA TTGACTTACATTGAATCATCACCAGCTGTTACCACCATGGCACAATGCAGGCTCCCATCCCAGCCACCCT CACCTCTTCCATCACCTGTCTCTAACCAGTCTCCTGTACAGACTACACTGGGGATTAATCCATTCACATT ATCTACACTTCAGATGAAGCCTGGTTTGCAGCTAATGGGACTGCAGTTTTGTGGTTGGCCGTCACCAGTC GTTCCAGCAAATATTCCTTTCTCATCGCCAGTACCTGGTATGGGATTAACGGCATCAGAAGGGAGTTCAC ATTCTTTCCTGACACCTAACACCCAACCCAGTAAAAGTGAATCACCTATAGCCCAAAGTGATAAATCCAT CTGCACACCTCCATCTACTGTGGAGGTCCCCAAGCAAGTAGATTTTCAAACCCCAAGGCCGATCCCAGAA GAAATGCAGCTTGGCTGGTGGAGAGTAACCGATCCAGAAGACCTGAAATCCTTGCTTAAAGTTCTTCATC TCAGAGGAATACGAGAGAAATCTCTGCAGAAGCAAATACAGAAACACTTAGAATATATCACCCAGACCTG CATGAAAACTAAAGATGTTACAATCATTGAAATGAATGGCCCTGAGGAATGTCAGTTGACACAAGACATT GTGGAGAACTGGTCTGTAGAAGATCAGGAAATGGAGGTAGACTTATCCATTCTACAGCAGATTGAAGACC TTGAAAGAAGAGTGGCGTCTGCTAGCTTGCAAGTGAAGGGCTGGATGTATCCAGAGCCGGCCTCTGAAAG AGAAGACTTGGTATATTATGAGCATAAGTCAGTTTCTAAAAGTCATAAGGAACATGGTGGAGAGCACACA ACAGATGAAGGAGGCAGCTTCAATGCTATAGAGCGGAAAAGCGACAACCCTCTAGATATAGCAGTAACCA GGCTGACTGACTTGGAGAGGAACATTGAGAGAAGGTATCTGAAGAGCCCTTTAAGTACCACCATTCAGAT CAAACTGGATAATGTGGGCACAGTCACTGTGCCTGCTCCTGCACCATCTATTAATGGTGATGGTGACGGA ACAGAGGATGACATTGCCCCAGGGCTGAAAATATGGAGGAAAGCGATTTCAGAGGCCCGGAGTGTGGCGC AAGTATCACTGTGCATCCAGCAACTGCAAAAATCTATTGCATGGGAAAAGTCCATCATGAAAGTTTACTG CCAGATCTGCCGTAAAGGAGATAATGAGGAACTGCTGCTTCTCTGTGATGGCTGTGATAAAGGCTGCCAC ACATACTGTCATAGACCTAAAATCACCACCATACCTGAGGGTGACTGGTTCTGCCCTGCTTGCATTGCCA AGGCAAGTGGACACACCTTGAAAACGAAAAAATCTAATCTGAAAGGGAAGAAGAGTATGGAGCTGAAGAA AGGCAAAAAGTCCCCAGGGGACACAGGAGAGGAGGATTCTACAGTAACTGGAACCCCAGGGAAAAAAGGG AGCAAAGATTCCAAAAAGAGGAAAGGGGAGGAAAACAACCTCAGCCCTTCCAAACAGGAGAGCTCCCCCT CTTCTAAGAAAGCAAGATCAACAAAGGATGAATCAAAAGACCTATCTCTGTGCAGTGTAATCTTGTCAGA CATGGAGTCGCATGAGGATGCCTGGCCTTTCCTACTTCCCGTAAACTTAAAACTTGTTCCCGGCTATAAA AAGGTCATTAAGAAACCAATGGATTTTGCTACAATAAGAGACAAGTTGAGCAATGGACAGTACCCAAACT TTGAGGCTTTCGCTCTAGATGTCAGACTTGTCTTCAACAACTGTGAAACATTTAATGAAGATGACTCTGA AATAGGCAGAGCCGGACACAAAATGAGAGTTCATTTTGAGAAACGATGGACAGAACTTTTTAACATGAGC TGAACCTTGTCATGGGGATCTTACATTAGTGGAAAATGTGACCAGCAATGTGGGTGGAAGCGCAAGAGCT GTTTCAATGTCTCCAACAAAGGGACATTATCAAAGAGCAGTGATGCATCTGAAGGTCTCATTCCTAACAA AATGATAGCCCTTGATTTCATTGGTCTTTGTCTTTTATCAACTACTGTTACACAGTACAGGGACGCACAC CCAAAGAATATCCAAAAGAGGGGCGTCATAGTGCAATAGTTATAAAAATATATAAAAACGCACTGAATTT TCAACCACCAGAGCTATTCTGAGGAAATGGTTCTCCATTCCCTATCAATAAATAATCTATTTCTTTTTTT TGTAATTAGTTTTGTTTTTATGTTATATTTTTATTTTGTAGGTTATTTTTAGCGAATGTATTTAATTTTC TGAATTATTTATAATTATACAGCAGACACAATCTTCATTTTCTGTGAAAAGGAAGAATTAAAAAAAAAAA GAATTGCTTTAAATCTTGAAAATACAACAAGAATGTTAAAAGAAAAAAAAAAGGAAAAAAAAAAAAACCA AGCCAAGTAAAACTGTTTACACTGACGTGCTGCTGTGGCACCGATGGAAATTTACTGTAGAATTACAAGT ACGTTTATATTATATTATGTTGCTGCACCACTCGTATAGTTATGTTGTATTTCAAGATGGTGAAGACAAA CTGAGAAATATGTAAATACTGTTTATTATTGTTTATATTAAGTCTTGTTTAAATATGTATGATGTGTACA AATTGTCTGCAGATGTTAACTGATGTCTGCCTTAGAAGGATTGTAGTTATTGAATTTAGTTTGCAGGTTG ATTAATCTATAGCTTGTACAGTATCCTCTACCAACACTGTGGAGTCTCCCCTGATATTGGTAGTGCCTGC CTTTCGAACAGGGTGTAGGGGATATTAAGTTGTTTTTTTTTAATTTTATTTCTATTTTTTCTCCTTATTT TCTATTTTGTTATATGATTTCAAGCCAACTAGGCCTACAGACAAAAATATAATCATTTGTATCCATGTGA GATAAACTTGTGACAATTTCCTACACACAGTATTTTTTCATAGATGCATTTCCTTTCACTTGCCTGGGCC ACGGGAGTAATAAATACAATAAAAGGCATTTCTAACCACTGTGTTTTATCTGCTGTGTGGTGGACCTGTC AGAGGCAAAACAAACAGACTTTTCTTTTCTACCAATTGTACTTGAAGTTGTTTTATTTAAAATGAAAAAA AAAAATGTTGTGAACAGGATAGTTTTTCCCACTAGTATGTGTGGCACGGATACAATAAAGGACAGTTTTG CAATATG
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
