Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
Simple Synteny Search
JBrowse2 Tracks
JBrowse2 X. laevis v10.1 L vs S synteny
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_041586815.1 PREDICTED: Xenopus laevis diphosphoinositol pentakisphosphate kinase 1 L homeolog (ppip5k1.L), transcript variant X3, mRNA CAGTCTGGGAATTCGCCATCACAGCAAGCAGGTTTATCCCTAACAGGTTGAATAAACTGCTCTATACTGT TCAGACTGATATAAGATCTTCAGAAGTCTGTTAAACAACAACAGTTCCAATGGCCTTCATCTACAAATAA AACATGCTAATAACTATCCATTTCCATGTGTATAAGGAGAAATTAGCACCGACTGCTTTACCATGTTGTA GACTTAGTGCTGTTAGCTCGTCTTCTCAAAACCTCTCAAGTTTTTACGTAATGGTTTTGGAGCGGGATGT TAGGTTTACTAGTTTGTGATGTCATCCTTGACCCAACCCTTCGGGGGCGACAGCTCAACACCCAGATTTT TTGTTGGTGCCCGAGATGATGAGACAGATTTCCTGGAATCAAACATGAATCAAGAAAAAGTTGACTTTTA TGAGGAAGAGGAAGATGAAGATGAGGAGGCAACCCCTCCCGAGCGGCAGATTGTGGTTGGAATCTGTGCC ATGACCAAAAAGTCCAAGTCTAAGCCCATGACTCAAATTTTAGAGAGACTGTGCAAATTTGAGTACATTA CTGTAGTTATTATGTCTGAAGATGTAATCCTCAATGAGCCTGTGGAGAACTGGCCCATTTGTGACTGCCT GATTTCTTTCCACTCCAAAGGATTTCCCCTGGATAAAGCTGTTGCTTACTCCAAACTCCGGAATCCTTTT CTGATTAATGACTTGAACATGCAGTATTTCATACAGGACAGGAGAGAAGTTTATCGCATTCTGCAGCAAG AAGGTATTGATCTTCCCCGTTATGCTGTGCTAAATAGAGATCCTGATCGACCTGAAGAGTGTAACCTAGT AGAAGGAGAAGACCAAGTTGAAGTGAATGGAGAAGTCTTTCCAAAGCCCTTTGTAGAAAAGCCAGTCAGT GCTGAAGACCATAATGTTTATATATATTACCCAACATCTGCTGGTGGTGGTAGCCAAAGGCTGTTTAGAA AGATTGGCAGCCGTAGCAGTGTATACTCACCAGAAAGCAGCGTACGAAAGACTGGATCATATATTTATGA AGAATTCATGCCAACTGATGGCACTGATGTTAAGGTGTACACTGTTGGGCCAGACTATGCACATGCAGAG GCTCGAAAATCACCTGCTTTAGATGGTAAGGTTGAACGTGACAGTGAGGGAAAAGAAATCCGATATCCTG TCATGCTGACTGCTATGGAGAAACTTGTTGCCCGTAAAGTCTGCTTGGCCTTTAAGCAAACTGTGTGTGG CTTTGATTTATTACGAGCCAATGGACACTCATTTGTCTGTGATGTTAATGGTTTCAGCTTTGTGAAGAAT TCCATGAAATACTATGACGACTGTGCCAAAATATTGGGGAATATAATTATGAGGGAATTGGCGCCACAGT TCCATATTCCTTGGTCCATTCCAACAGAAGCAGAAGATATTCCTATAGTGCCAACCACATCTGGAACAAT GATGGAGCTGCGATGTGTTATAGCGGTAATTCGACATGGGGACCGCACACCAAAACAAAAGATGAAGATG GAAGTTCGACATTGCAGATTTTTTGAATTGTTTGAACATCATGATGGTTACAAGACAGGAAAATTAAAAC TGAAGAAACCAGAACAGTTGCAGGAGGTGCTGGACATTGCTCGATTGCTGCTAGCAGAGTTAGGAACACA CAATGACTGCGAAATAGAAGAAAGAAAATCCAAACTCGAACAACTCAAAACTGTTTTGGAAATGTATGGT CATTTCTCTGGCATTAACAGAAAGGTGCAGTTGACATATTTGCCCCATGGGCACCCAAAGACATCCAGTG AGGATGATGATGCACGAAAGGACTCACCTTCTCTTTTGTTAGTATTGAAATGGGGTGGTGAATTGACCCC AGCTGGAAAAGTACAGGCCGAAGAGCTTGGTCGAGCATTTCGTTGTATGTACCCAGGAGGACAAGGAGAT TATGCTGGATTCCCTGGCTGTGGATTGCTTCGCCTGCATAGCACATATCGCCATGATCTGAAAATTTATG CGTCTGATGAAGGACGAGTGCAGATGACAGCAGCAGCTTTTGCAAAGGGTCTTCTGGCACTAGAAGGAGA ACTTACACCAATTCTTGTACAGATGGTTAAAAGTGCAAACATGAATGGACTCCTTGATAGTGATAGTGAC TCCCTTAGCAGTTGTCAGCAAAAAGTAAAGGCCCGTTTGCATGAAATCATGCAGAAGGATAAGGAGTTCT CAGAGGAAGAACAGGAAAAGCTGGCCCCTACAAACAGCAAGTCTGTGGTAAACTCCATGGAGTGTATTCA AAATCCTGTAAAAACATGTGACAGCGTGTATTCCCTCATTGAAAATCTTACTTCTCAGATTCAGAAACGC CTGGAAGACCCCAAATCCGCTGATCTGCAGCTGTATCACAGTGAGACCTTAGAATTGATGCTACAACGTT GGAGCAAGTTGGAGAGAGATTTTCGCATGAAGAATGGGCGTTACGATATAAGCAAAATCCCAGATATCTA TGATTGTGTTAAATATGATGTTCAACACAACAGCTCTCTGAAACTGGAGGGGACAGATGAACTGTTCAAG ATTTCAAAATCACTTGCAGATGTTATAATTCCACAGGAATACGGGATAAATAAGGAGGAAAAACTGGAGA TTGCCGTGGGATATTGCCTTCCTCTGATTAAGAAGATTCAACTGGACCTACAGCGAACACATGAGGATGA ATCTGTTAACAAACTTCACCCCCTCTATTCTAGAGGGGTTTTATCTCCTGGACGCCATGTTAGAACACGG TTATACTTTACCAGCGAAAGTCATGTGCACTCTTTATTAAGTATATTTCGCTATGGAGGACTCTTGGATG AGTCCAAGGATCAACAGTGGAAGAGAGCAATGGATTACTTAAGTGCTGTTTCTGAACTAAATTACATGAC TCAGATTGTGATTATGCTTTATGAGGACAATAACAAGGACGTATCCTCAGAGGAACGGTTTCATGTGGAG TTGCATTTCAGTCCAGGAGTCAAGGGCTGTGAGGAAGATCAAAATGCCCCCCTGGGGTTTGGATTTCGTC CAGCATCAGCAGAAAATGAAGATAAGAAAACTGATCAGGGGAGTTTAGAAGACTTATCCAAAGTGAAAGG AAGTGATGAAGTGGATAGATCTATTCTTATGTCCCCTCTACCACCAGAGCCTCTCAGTCTCCAGCGCAAA TCACCACTAACTCGCTCCAGGAAAACCGGGTCAATGGAGGTCATGAATGGCAAAAGCACAGGCAATAGAG GGCGCCGGAGAAGAAGATCGGGAGAGCCCCTTCGCTCCCCATGTTCGATCACTCTGCAGTCCAAGGCCAT GTCCACCACTAACCTGGCATCATGGCAACAGGTCCTTTCTGAGACATCATCTAAAGCTGGCAGCTACCGT CTCTTCACTTCCTTTGCCAGACAGTCCTCGGACATGAAGCAAAGTGGTTTAGGATCGCAGTGCACTGGGC TGTTCAGCACCACAGTGCTGGGAGGCTCCTCCAGCGCTCCCAACCTGCAGGACTACGCACGCAGCCACCG CAAAAAAATCAGCTCTGCTGCCAGCCTGACTTACAAAGACGAATGCCTGGAAGACCACGAGGTCGCCCAG CTGCTGCGCCGCTTTTCCTGTGACTGCGCCCAGTCTCGGAACATCTGTCTGGATCGGGCTATGGCCCACC ACCTGCACCAGTGCTACTACCACCTGCGTCTCTTCAAGAACTGGCTGATCTCGGGCCATGACGATTTGGA GTGCCTCTACGGTTTTGAGGGTTGTTCCATGGTACCTACTATCTACCCTCTGGAGACACTTCACAACTCA TTGTCCCTCAGGCAGGTTAATGGCTTTTTGACAACAGTTTGTAAACAATTTGCAGAAAACCAGTCAAGAA GATCTTCAGCCGGATGTGACTCCATGATGTCAAGCCATACATCTGATGCTTACTTGCCACATCGAATACT CTCTTCTTCCTCACTTCATTATCGTCACCGCTCAGAGAGGCCTCCCTGGTACAGCAGCGGTCCATCTAGT ACAGTGTCCAGCGCAGGTCCATCATCCCCAACCGCTTTAGATCTCTCTGCTCGTTTTAACTTCAGTGATA AAACTTCCCTCACCGAAGAGCAAAGAAAAAAACTAAACCTTGAAGAGAATCTTCAGCTTCAGAATTCAAT TGGTGAGGGTCGATCCAACAGCCAGGAGATTCATCAGTTTGAGGAACCGCTTGCTAGTGAATGTTTGACA CCAGAGCCTTCCAGTGGTGTGGCTGCACCTGTGCAGCAGTGTGTAGAGCATGAGCTTCAGATCGGCCTAG AATCATTTGGAGAGGCTTCAGTTCCCAGTCAAGCACTATCAGAGCTTTCAGACCAGAGCATGAAAACACA TAATCAAAAGTTTCCCCTCCTGTCTCCTGTAGATGAGCAGATGATAACAGAATTAGCCCTTCAAGGTAGG GAGACATCTCTTTAACAACTGGAACAACAAAAGAAGTAAGTTGGCCTGGTAAAGGTTTATGAACGTGGCC TATAACACGGATCTCTGGAGTTGCCACTAGTCTTCAGCACTGAATGACGTGATACTGCAGCAAGTTTAAT CCAAACTGATGACAAAAATACAGTAAACATTTACAGACTCAAGCAAAAAATCCTGTTTATTTGACCAGAC ATTCTGTACAACCATTTCAAAGGAAAGGATGCATAGTGCACAAATCAGCCATATAAAATATATAACTATC CAGTATTACATGTAACCCCTGTTACATCTGTTGTCATTGAAAACTTCTCTTCACCAGCTAATGGGCAGCA TGTAAGGAAGTGTTTTGTAGGTTTTATAAAGGTTTGCACTTGATTAGTTGCAATGCTGTCTTTAAGGCAT AAACCATAACAATAAGAAGCTCAATCCTTCTGGACATGGTCATTACACAGAATGGTAAGGCGTTTCTAAC CAGCTGAAATGACACTTTTCACATTTGAGTTTTAATGGCGGATCATAAACTTTAGTCAGTTAATATATTC TGATATCACTGGCATTCAATTAAAATGTGATAGAGATAAATTGAGTACTGAGATCAATGAAGTCTGACTT TGTTTTGCTGATTTTAAAAAAAAGAAAAAGGCTAACAATTACAATTGCACAAGAAAATGAAGCAATGGGA AATACCTTCACACCTACCTTTTTCAAACCACTCACAGCCGTCCTTATTTATAGTTCTTCAAGATGGGATA CTGTGCAAAAGTAGGTGGGTGATTCAGCCATTTATATAAATTCAGAAAGTAAACCACAGCTGGTTAAATA ATAATCAAAAGTAATTTTTGCTGTGACATTATTATACATTTTATTGGACTTTTTGTTTCTTTTTTTTCCA GTGAATGTACTTTGAATACAGGAACTTCACTTGTTTGTTCATAGGCAAGCTTGTGACCCACATCTGTTCT GTTGCAGCTTCTAAGCATACAGATAGAGTAAAGACGCAACAGCAGTAGGTACTAATAAAGAAGCTTATGC AGGGCCATTATAAAACAATTTTGCTATATTTCTAAAGTCAGTCTGGGTGAGCAACAGATGTTTTTGCTGC ACCAATAAAGAAATCTGCTTGGATAAACAGTTCCTACAGTGCAGCAAAGAAAGGGGTTTCATATATTGCA GCAAACTATAATATGGCACATGGGAAAGAATACCTGCTGCTCCCCTGGCTGTTTACTTAGCCTCTTCTAA GGCAGCTTTATGGCCCATATATGAAGGGTTTGGTCACATATCAGTGGAAAATACCATCAGCTAGTGGATT CATCTTATCCTTGTAGGTCTGCCCTGGTTGTGCCAGAGGGCAAACAGATCAACCCACTTGGTCCACTAAT TAGATGGCCACATATTGCAAAAATCTGTCTTTGGTGTCTTAACAAATGAGCAGATCTTAGTGTATACATT TAACCAAGGAGATCAGTAGCTAAGGTAATGGCACATGGACTGCTTAGAGCAACTATTTTTGGATGTGTAA AAATATGCTCAAAGAGCACCCAGAACTGGCCAGTTGGCCATTACCTAAAAGTAGGGTTCTCGCTTCTTAA AGAGAGTTTCTGCAAGCACTCTCTTTAATGGACATGCTCTAATCTATTTTGATTAGATTTTATAAAGCAG TTTTTTTGCTTAAAGCAAACATGACACAATTATAACTCTAAACTAATGAACTCTGTGGTTTTTAGGTTTG AACTGTATCATTACATAAGGAACTTGATGCAACTAAGGATTAATCTGTATGGTATACTGATTCTACATCA GAGCACATTGCACTTGGACATACATATTAGTTATTGTTTATTAGACCGTTTTCCAGCTTCACTCCGACTG TGGTGCCAAAACAAGGGCCAAATGGTGAAGCTCCTTATTCTATTGATATCTGATGACTATAACTGATCAT TTATTTGATGTCAATGAAAGTGAAGCTGTATTGCAAACATGATCACATGTATACTGTTTCTGGACCTGGC GATTATAATATACACACAATTTGCAGACGTTCGCTTGTGCTGTTTTTAATTATTAGCTCAGTCATTGCAT CAGATTCATATGGATGGTAAATAGAACACTTTATAGATTTTACTTGGGCATTGGTTTTCTTTTATTCTGC TGCCAATTATGGGACATCCATCTTTTCGGGCTACCAATTTAGAGGCAGACGTTACTTTCTCTAAACATTA TTTGGAACAAAATAGATTTTGTTTTATTATAAACAGCCTGTCTCATGGATATATTAATATGCCAAATCAC ATTTACAAACAAGCATTTATTGTTTTTTAATCAATGTAGTACATCAGGGGAAACCCATGAGGAAGTTTAA AACTATTTTAGAAAATAAACTTTTTTTCATTGAAACCAGTAGCCAGTTATATTAATGGCAGCTGTTGGAT TAGATGTACTATTTTCACGATGACAGAGCTATTACGATTGAAAAGAGATGAATCTATATTATATAAAATG ATCTATATTGTTAAATGTTTAATTTATATATTTAATCCAGATGTTTGGAGCTGGTACTACTGTGCAGAAT ACAGTAGGCTTGTTGCAGTTCGACATCATTATATGATGGGTAGACGTAGAGTGCAGCTAACCATTGCCAC TAGTTATCCGACGCAGCTCTGGATTTGTAAATGGTTGTACATGTTGTGCAGTAGTGCAGTGTCGTTTGTC TGTTTCTGTTATGAGATTGGCATCATGTTCCTGAGATTTTTAAAACGGTGTAGTGAGTATTGTGTTTATC TACTGTTCCATATACTGTATTTGATTCTGTCATTCAGAATGAAGAAGGGAAACTGTTTCTGAATATCCGT ATGTCCAATGAACAACATTGAGGAACTTCATGTTATAAGCTTTGAGTATGTGGCGCCACGTTGAAATCAG CCAACAAGTGGCTTCAGTTTATGGGTTATATCAAGGTGTACTGCCTGTGTCACTGCCATTGGTATGGGTT GGATATTCCTCGAGAATTTCCCTGTTTTAGAGGCATCTATTATTACAATGTCATGTCTAACAGTATATTG TATGCGCTAGAGACAAGCTGTAGAATAAAACAAGACAAGTAAATCCGGTGGCAAATCTGGAGCAATTGCT CCATTCGTTCAATTATATTCAATAGAAAAGTATTCAGTTTTCAAATAAATTAATGGTATGCTTTATGTCC AGAATACTAATGAGATTGATCCTTCTTTGCAAAATGTGTACGTTATAAATTATCTATTACATTTTTTATT TTATTTTTTTTCTTCAGATTTTTCAATTGACCAAAACCAAGATCCAAAGTAGTTAAGGGAATTGAATTAG TTATGTGATATTGCTATTTCATTTAAACAGTCATTGACTATTTCTTCTCTATAGTAAACCTGAATTCTTG ACCTGCCTGTTTTATCTCTCTTTTTTTTTTTTTTTTTTTAAATGTTTTTTGTACCATTATACCAAAACAC CTTCAAGCCCTCTACATTAAATACATTTAAATATTTTAAATAAACTTTCTCATCTAGGCAATATATATAT ACAATGATGGTCAATCTCTAAAACATTGTCTTAAGTTGGGACATCTGATTTGCTTGTCTTTTTGCTTAAA TAAGCTATACAGTCTTACGTTTTCTAAGCCATGAAAGTTGTTTTATGGTTGCACTGTTTGAATGGAAACA CTCCTGTCTGAAAGCAATAAAGTTGTTTTTGGAAAATTAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds