Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
JBrowse2 Tracks
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_041585029.1 PREDICTED: Xenopus laevis protein tyrosine phosphatase, receptor type Z1 L homeolog (ptprz1.L), transcript variant X2, mRNA TGCAGATGAGGCAGGTCTAATCTGCCTTTGAGGCAGCGCTTGCCTGGGAAGCTGTTTTCTTTGCTTCTTC TCCCTGTTGCCAGTGGCTGAGAGAAGGGAGCCTAGGAGAAATCGCTGTAGCCATGAAGAAACGCTGCTAG AAGTGACCCATTCCCTAAGGAATAAGATCTCTGCCCTCTGGATCAGCACTACTTCTATCTTTTGTTGATA ACCACAGAACGGGAAAGGGCAGAAAAATGGTAAATCCCCGCTGCTTTCTGGTGTGCCTTCAGCTCTTCTC TGTCTGGCAAGTGGGTTTGCCGTTTTCATATTACAGACCACAGCGTAAATTAACTGAAGAAATAGATTGG TCTTACACAGAGACATTAAACCAAGAAAACTGGGCAAAAAAATACCCAGCGTGCAATGGTGCCAAACAAT CTCCTATCAACATTGACGAGGATTTAACACAATTAAACACAAATTTAAAGAAATTACATTTTGAGGGTTG GCATGAAGAGTCCTCAGCATATACACTAATTCGAAATACTGGAAAAACAGTGGAAATCAATTTGACCGAT GACTATTTTTTGAGTGGCGGTGCCTTAGATTCACAATACAAAGCAAGCTGGATAACTTTTCATTGGGGAA AATGCAATGCTACATCTGATGGTTCTGAACACAGCTTAGAAGGCCAGAAGTTTCCTTTAGAGATGCAAAT CTTCTGCTTTAATCATAAAGAGTTTGAAAATATTGATGAAGCAATAAGTGCAAATGGCAAAATAAAAGCT TTATCCATTTTATTTAAGGTTGGCCAGGAAGATAATGTGCATTATAATACAATCATCGATGGAGTAAATA ATGTACATCGTTTTGGTAGAAAAGTTGCATTGGAGCCATTTATTTTGTCAGATCTTCTGCCTGACTACAC CGACAAATATTATACATATAATGGCTCACTAACAACCCCACCGTGCTCAGAATCAGTGGAATGGATTGTC TTTAAGGACACAGTTACAATTTCAGAAAGCCAGTTAGAAATGTTTTGTGAGATCCTTACAATGCAGCAGT CTGGGTATGTTATGGTGATGGATTATTTGCAAAACAACTATAGGCATCAGCAGTATACGTTCTCAGGACA AGTATTTTCATCTTATACTGGCACAGAAGAGATCCCGGAACCAGTTTGCAGCTCTGAACCAGAGGATGTC CGAGCTGATTCAAAAAATAACACAAGCCTTCTCATAACATGGAGGAGACCAAGGGTTGTTTATGATGCAG TGATCGAGAGATACCTGGTTTTCTATCAACGTTTAGAAGGAGAGGATCAAACTAAGCACGAATATCTGAC TGATGGCTATCAAGACCTGGGCGCTATAATATACAATGTGCTGCCCAACACCAGTTATGTTCTTCAAGTA GTAGCAATATGCACAAATGGCCTTTATGGGAAACGAAGCGACCAGGTGATTGTTGACATGACACTAGATC CCCAAGGAACTGATCCATTTACTGATTTTACAGAAACTGAAGAAGACATAGAGGACAGTGAAGAGGTAGA AGAGGAAAAAGAAAATGAAAGCACAAGAATAAGTTTGAGCACTGTTAGTAATACAAACCAAATACAAGCA CAAGGAGGGCAAGCAACCACTTCAAGCTATTCTGAAGGAAATGCATATATAATTACAGAAAAGACAGCAG ACGACAAAATACAAAAACACAGAGATGGTCTAAAAGCTTATCTATATCCCACTTTACAAACTACGACCAA AACAATGCGTGATACAACTCTTGATTATTCAGGAAAATCTATGAAAGATGCTGTAATGCCACAGTCTGTA TCTGAAGCGACAACTAATTTAAGTAATGATTTTAAAAGCAGAGTTGAAATATGGATGCTAAACATATCTG ACTCTACTAAAGGTATTACTGAAGAAGATGAACAAACCAGTGCTGATAGTGAATTACATGCAACAACTAC AAGTTGGAAGAGAAGAATTCTTATTCCAACTAGGAATCCTAAGCCAGTTTCTGATCACTCTACAGTTTCT ACTGCACCTACAGTATCGGCAACATATTTTTCAGAAATTACATCTCAGGGAAATACAGAGTCCTCAGACC TCCCTTATTCAGACATAAATGATGCCTTTACTTCAACTAGTGAGGACATATCAAAAGTCAAAGCCCCAGT TACTGAATTTGAATTATATAACATTCCAACTTCTACCTCTAAGTCAAATGTCCCTGTGGTTACTGAAGAA GAACATACTACTAATTCCATCAATCTTCATATGGATGAATTATTGTCAACATCGTTTTCCAGGCAGACAA CAGTGCTGCAGGCTACAGCTTCCAGTTTGGAAGATGTGAACAAAGCTACACTTCCTGGACAAGAGATGCC GCTGGTTTCAAATATCACTTTTTCCACTCCAAAAGTATTACTTGAATCTGTCTCTGCAAGCTTTGGACAT CATGACTCAGAATTATCTGTGACTGAGGTACTCTCTCAGGCAACGCTGTCTCAGACAACTCAACCAGTTT CTAATGCTGGTTTTCCAAACAGTGAGAGTCCTAGCACATTAACAATGTTAACCGCTACATCCCAAACATC CTCTGATATCTTACCTACTGTCAGCTCTAACACCAAAATGGGGCCTTCTGTAGTAGATGATGGTTTTATT ATAGCCAGCACATATTCCACATCACATACAGAAGCCCAAGAAAATGTGATAGCTGACAATAGTGTACACA GAACAATTCTGAAGAATAAAACATTAAGTGAATATTCTGAGCAATCTGAAGAAGGAAGTGCATTTTCAAC TGCTGCAGTAGACAGTAATATAGATTCTGATATGGAACGAGGGAGCTTTTTATCGACAACAATGCCAACG AGCAGCACTGGACAGAAGCACATCCAGTTCACTGCACCGGAAACTCGTGTTCAGACTCGTAATACCCTTC TGGAAAATACATCTGAATCAAGCTCCTGGGCTGTGCTTACTGATGAAGAGAGTGGTTCTGGTCCAAGCAC ATCTGATAGCCTTTGTGATAACGAAACCTCCACAGATTTCAGTTTTTCTGATATTAATGACAGAGACAAA AACTATGAGGTTGCAATTCAGCCAGGTAAAGCAGATTTAACTCCTGGATCTGAAATTACATCACCCCCAT CTGTTACTAGTGAACGTTCACCAGTAGTCAACGTGTCTGAGGCAGAGGCAAGTAATAGTAGCCATGAATC TCGTGTTGGTCTAGCAGAAGGTTTGGAGTCAGAGAAGACAGTAATCCCACTTGTTGTCGTCTCATCCCTC ACCTTTATCTGTCTTGTGGTGCTTGTGGGTATTCTGATCTATTGGCGGAAATGTTTCCAGACAGCACATT TTTATTTAGAAGATAACACATCATCAAGGGTGATTGCTGGTCCACCAATTCCAGTATTTCCAGTTGCAGA TGATGTTGAAGCAATACCTTTGAAGCAGTTCCATAAACATGTTGAAGATTTACATTCAAGAAATGGATTT ACTGATGAATTTGAGAAACTGAAAGAGTTTTACCAGGAGGTTCAGAATTGTACAACAGATTTAGGGATTA CATATGAAAATTCCAACCACCCAGACAACAAGAATAAGAACAGATATATAAACATTGTTGCCTATGATCA CAGCAGAGTTAAACTTTCACAGCTTGCAGAGAAGGATGGAAAGGCAACTGATTATATTAATGCTAATTTT GTTGATGGCTACAATAAACAGAAAGCCTACATAGCAGCTCAAGGGCCATTAAAATCGACAGCAGAGGATT TCTGGAGAATGATATGGGAACACAATGTTGAGGTCATTGTGATGATTACAAACCTTGTTGAAAAAGGCAG GAGAAAATGTGACCAGTATTGGCCTAGTGATGGCAGTGAAGAATATGGTGCATTTCTGGTAACTCAAAAG ACTATAAAGGTCTTGGCTTATTACACTGTACGAACATTTACTGTGAGAAACAATAAGATTAAGAAGGGAT CACAAAAGGGCAGACAAAATGAGCGGGCAGTGGTGCAATATCACTATACACAGTGGCCTGACATGGGGGT TCCTGAATATACCCTTCCAGTACTCACATTTGTAAGAAAAGCTTCAGCTACAAAGCTTAATGGTCCTGTA GTAGTGCACTGCAGTGCTGGTGTTGGAAGAACTGGTACGTACATTGTACTGGACAGCATGTTACAGCAAA TTCAGCATGAAGGAACTGTAAACATTTTTGGCTTCCTGAAACATATTCGTTCTCAAAGAAATTACTTAGT TCAAACCGAGGAGCAATACATCTTCATCCATGATGCTTTGGTGGAGGCTATTCTTAGCAGAGAGACAGAG GTCCCTGAGACACATATTCATGGCTATGTTAATACTCTCCTAACAATGGGCCCATCTGGAAAATCAAGAC TAGAGACACAGTTCAAGTTATTAAGCGAGCCGAACATACTACAGTGTGATTACTCAACGGCATTAAAACC ACAAAACAGAGATAAAAACAGGACTTCATCTGTCATTCCAGTTGAAAGATCAAGAGTAGGCCTTTCTTCT TTGGCAGGAGAAGGAACAGATTACATTAATGCCTCATACGTTATGGGTTATCATGAAAGTAATCAATTTA TCATCACACAACATCCTTTGCTTCACACAATAAAAGATTTCTGGAGAATGATGTGGGACCACAACTCCCA GTTAATTGTAATGCTTCCTGATATGCAGAATATGGCTGAAGATGAATTTGTCTACTGGCCAAACAAAGAT CAGCCTATTGTATGCGACACCTTTACAGTTACCTTGGTTAGAGAAGATCACGTGTGTCTCTCAAACGAGG AAAATCTGATCATCCAAGATTTTATTTTAGAAGCCACACAGGATGACTATGTTCTTGAAGTGAGACATTT CCAGTGTCCAAAATGGCCAAATCCAGATAGCCCTATTAGCAAAACATTTGAGCTTATAAATCTGATCAAA GAAGAGGCTGCAAATAAGGATGGAACAATTATTGTACATGATGAATATGGAGGGGTGACAGCAGGGACAT TTTGTGCTTTATATAGCCTCATGCATCAGCTGGAACAGGAAAACTCGTTAGATGTTTACCAGGTGGTTAA GATGATCAATCTGATGAGACCAGGAATTTTCACAGATATTGAGCAGTATCAGTTCCTGTATAAAGCCATG CTCAGTCTTGTAAGCACACGACAAGAAGAGGATTCAATGGTATTTATGGACACTAATGGGGCACCTCTAC CTGATGGTAGTACGGCTGAAAGTTTGGAGTCGTTAGTGTAATTCTGTGGCATTCGATGGCAGAGGCATTT TCATTGTCCAGTCTTTCTGAAACGATAAATTGGGAAAATCTGCGGAAGCATTGAGCAGTTTGCATACTTT TGGCGATTTGTTACCATTGAACTTTCACAATGAATAACTTGTGCCTTTTGGGGGACAACTTGTAATCTAT GTGTCATGTCAAGACTAACTTGACCACTTGCAGTGTTTTTATAAATATATTGTCATATGTTTTCCAGTAT TAGTTTATTATTAATATAAAATACATATTTCTAGATGTGTTTTTTTTTTCGCTTTGGAAGAAAAGCGATC TGTCAGTGTCACAATGAATTGCGCTTTGGTAGGAATTTATTAGGAATTCTTGCATTTGCTAGCTTTTGAC TTTTCTATATTCTGTTGGAATGCAAATGACATTTTTCTCTTTATAACATTTCAAAGCTTAAAGCTGGTAT AGGGGACAATAATCTAACACTTCCTATAATGTACATATTGTTATAGTGACTCCATGGACCAAATTTATAT TTATAATTGTAGATTTTTATATTTTACTACAGAGTCTGTTTTCTAGTAACTTGTAACTTTGTTGGTATAA TAATGTACTTTATTTGATTTTACCAAAATTTCTGACCTGTTGCATTGCATCTATACATGGATAGCATTTA TGTTATTGCATGAACTTCTGTTAAAAATAAAATAGTTTCAAATATCTTAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds