Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
???banner.login???
???banner.register???
Contact Us
Cite Xenbase
Search
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
GEO Data Sets
Phenotypes
Genes
Xenbase With Google
People
Labs
Organizations
Paper Authors
Paper Titles
Xenbase Accession
Clones
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
GEO Data Sets
BLAST
Xenopus
mRNA
Xenopus
protein
X. laevis
10.1
(J-Strain)
X. laevis
9.2
(J-Strain)
X. tropicalis
10.0
(Nigerian)
X. tropicalis
9.1
(Nigerian)
Mitochondrial genomes
Other amphibian genomes
Genomes
Download
Xenopus
Genomes
X. laevis
v10.1
(J-Strain) on JBrowse
X. laevis
v9.2
(J-Strain) on JBrowse
X. tropicalis
v10.0
(Nigerian) on JBrowse
X. tropicalis
v9.1
(Nigerian) on JBrowse
JBrowse2 Tracks
Xenbase UCSC Track Hub
Other amphibian genomes
on JBrowse
Expression
Expression Search
Anatomy Search
GEO Data @ Xenbase
RNA-Seq Visualization
miRNA Catalog
X. laevis
Protein Expression
Genes
Gene Search
Gene Search Tips
Gene Nomenclature
Gene Nomenclature FAQ
Phenotypes
Phenotype Search
Mutants
Disease Models
Disease Search
Xenopus
Phenotype Ontology (XPO)
Anatomy & Development
Anatomy Atlas
NF Development Stages (Classic)
NF Development Stages (Zahn Drawings)
Xenopus
Staging Landmarks Table
Development Stage Temperature Charts
Movies of
Xenopus
Embryos
Images of
Xenopus
Embryos
Images of adult
Xenopus
frogs
Cell Fate Maps
Xenopus
Anatomy Ontology (XAO)
Zahn Drawings
Reagents & Protocols
CRISPR & TALEN Support
???header.navigation.xenbaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
???header.navigation.searchORFeome???
Small Molecules Wiki
Protocols Wiki
Search Clones
Clone Libraries
Vectors
Obtain Frogs
Literature & Community
Search Papers
Find People
Find a Lab
Organizations
Job Postings
Xenopus
Community Groups
Meetings & Resources
Xenopus
White Paper
International
Xenopus
Board
Stock Center
Lines and Strains
Mutants
Transgenic Constructs
Clones
NXR
EXRC
NBRP
TEFOR
XLRRI
Download
Data Download
Gene Page Reports
Browse Download Site
Browse General Repository Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Xenopus laevis J-strain 10.1 Genome
Xenopus laevis J-strain 9.2 Genome
Xenopus laevis J-strain 9.1 Genome
Xenopus laevis J-strain 7.1 Genome
Xenopus laevis J-strain 6.0 Genome
Xenopus laevis outbred 1.0 Genome
Xenopus tropicalis 10.0 Genome
Xenopus tropicalis 9.1 Genome
Xenopus tropicalis 9.0 Genome
Xenopus tropicalis 8.0 Genome
Xenopus tropicalis 7.1 Genome
Xenopus tropicalis 4.1 Genome
-- mRNA --
Xenopus laevis and tropicalis mRNA
Xenopus laevis and tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis mRNA plus CDS
Xenopus laevis mRNA plus EST Clusters
Xenopus tropicalis mRNA plus EST Clusters
Xenopus laevis and tropicalis EST
-- Protein --
Xenopus laevis and tropicalis Protein
-->
Xenopus laevis Protein
Xenopus tropicalis protein
???blast.query???
>XM_041560973.1 PREDICTED: Xenopus laevis LDL receptor related protein 4 S homeolog (lrp4.S), transcript variant X2, mRNA CGAGCGGGGGAGAGACAGGAGCTGGAGTTGGACGTGAGAGAGAGAGACAGGAGCAGAGAGAGAGAGAGAT AGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGACAGGCAGGAGCAGAGAGACAGAGAGAGAGAGACAG GAGCAGACAGAGACAGGAGCAGACAGAGAGAGAGAGATAGGAGCAGAGAGAGACAGTAGCAGAGAGAGAA GAGCAGAGAGTGCAGGGAATGAGACAGCAGTGGGCACAGGGTAGGAGACAGTGAACGGAGGATTGGAGCA AATTGGGGTTTGGGAAAGGAGAGTGCAGGGTAGGTAGAATGTGAATGTGGCAGCCAGGAAGGGGCATGTA GAATCGTGTAGGGGCACAGTGTCCCACATTGGAGCTGACAGAGGAGCTGAAACACTCTGAGCCCAGGCGT TTAAAAGGCTCCTGCCCACAGATCTGCTCTTAAACTCTGGCACCGACTCCGAGATCTGATCTGGCACCCG GACTCTTCCACCTTCATATCTGGAATTTGGGCACAGCCTTCCAACCCTTCAGAACTGCCCCAGAACCCGG GCACAGACTTTATATTTTAATCTTCAGCCATGAGATGTGATCTGGAACCCGGATGCAAACTTGACACCTG GAACCTGGCCTAGACACTGCAACTCTGAGATTTGCTCTGGAACCCGGACATTGCTGTGAGAGGTACTTGC TGTTACCCAGGGCACATGGGCAAGATCTGCTCCAGAACTTTCTGTTATGTGCTGCAACATGGATATTTTG CCTAGAATTTTCTTGGGCCTGGCAAGGTCTGGACGTCTGTTCTGGAGCTTGAGTTCTAGAACACGGGTGC AATCTTCAGTTTAGCGCTAACATTTGGACAGTGCCTTGATTTGACCTGGAACCTTATAACATCTTTTGTT TTGCTCTGGTACCATCAAGCTGGACCGTCCATTGGTTCTGCTTTGGGTCCATTAAAGGATACTCTTCTAC TTTCGGTTTTGGAACTTGAAGGGGGGTACAGCGCCCTCCCCCAGAAGAATCTGATAGAGGAAAGATCAGG AAAGGGTCACCAGGGGGAGAAGTGGCATTATGGGCAGACGCTGCTCAGAGCTATTTGATCGGAGAAACAT GGAGCTGATTGTGGGGTTGATTCTTCTTCTGTGTGCTATAGGGGTCTCCAGCTCACCGGAATGCTCCTGC GGCCGCAATCACTTCACGTGTGCCGTCAGTGCGTTTGGGGAGTGTACGTGTATTCCTGCGCAGTGGCAGT GCGATGGGGACAATGACTGTGGCGACCACAGCGACGAAGATGGCTGCATGCTGCCCACCTGCTCCCCACT GGATTTTCACTGCGACAATGGAAAGTGCATCCGACGCTCATGGGTGTGTGATGGCGACAATGACTGCGAG GACGATTCCGATGAACAAGACTGTCCACCCCGGGAATGTGAGGAGGACGAGTTCTCGTGCCAGAATGGAT ACTGTATCCGAAGCCTGTGGCACTGCGATGGGGACAACGACTGCGGAGATAATAGCGACGAGCAGTGCGA TATGAGGAAGTGCTCAGAGAAGGAGTTTGGCTGTGCAGATGGGAGCTGTATCGCTGAGCACTGGTTCTGC GATGGAGACACTGACTGTAAGGATGGATCTGATGAGGAGTCGTGCCCCTCGGATATCCCTGCTCCAAGCT GTAGCGTGGAGGAGTTTCAGTGCGCATATGGCCGCTGCATCCTGGATATTTATCACTGTGATGGTGATGA TGACTGCGGCGACTGGTCTGATGAGTCAGACTGCTCCTCACACCAACCCTGCAGGTCTGGAGAATTCATG TGCAACAGTGGCTTATGTATTAACTCTGGGTGGCGCTGTGACGGTGACTCTGACTGTGACGACCAATCGG ATGAGAAGAACTGCACGACTTCCATCTGTACGGCCGACCAGTTCCGCTGCAGTTCAGGTCGCTGTGTCCG ACTTGCGTGGCGATGCGATGGGGAGGACGACTGCTCAGATAACAGTGATGAGAGAGGCTGTGAGAAAACT GGCTCCCCTCAGTGTGCACAAGACCAGTTTCTATGCAGTAATGGGCGCTGCATCGGGCAACGGAAACTAT GCAATGGAGTGAATGACTGTGGGGACGGCAGTGACGAAAGCCCCCATCAAAACTGCCGGCCACGCACCGG AGACGAAAACTGCGACCACCAAAATGGAGGCTGCGAACAAAAGTGTCAGACGGTGCGAGGACTGGTTCAG TGCACGTGCCAGACGGGGTACAGGCTGAGGGAGGATGGGAGATCTTGTCAGGACGTGGACGAATGCGCTG AGGAAGGCTACTGTAGCCAGGGCTGTATTAACTCCCAGGGTGGCTTCCAGTGTTCGTGTGAAGCTGGATA CCAATTACGTCCGGACAAACGAAGCTGCAAGGCCCTTGGACCAGAGCCAGTTTTACTCTTTGCCAATCGA ATTGACATCCGACAGGTCCTTCCTCACCGCTCTGAATATACTCTGCTCCTCAATAACCTGGAAAATGCCA TCGCCTTGGACTTCCACCACAAGCATGAGCTGGTCTTCTGGTCTGATGTCACTCTGGACCGTATCATGAG GGCCAATCTCAATGGCAGCAATGTGGAAGAGGTGGTGTCTACTGGTCTTGAAAGTCCAGGGGGTCTGGCA ATTGACTGGATCCATGACAAACTGTTCTGGACAGACTCTGGAACCTCTCGAATTGAAGTGTCCAATCTGG ATGGTTCCCATCGCAGGGTCCTCCTGTGGAACAACCTGGAGAAACCTAGAGCTATTTGTCTACACCCCAT GGAAGGCACCATCTACTGGACAGACTGGGGTAACGTCCCACGCATTGAATATGCCAGCATGGATGGGTCC AACCGACGTGTTATTGCAGACACGCACCTTTTCTGGCCCAACGGCTTGACCATTGACTATGCTGGACACC GCATCTACTGGGTGGATGCAAAGCACCATGTGATCGAGCGGGCTGACTTGGATGGATCCAATCGCAAAGC TGTGATTAGCCAAGGGCTCCCGCACCCATTTGCTATCACAGTATTTGAGGACAGCCTTTATTGGACTGAC TGGCATACTAAAAGCATCAACAGTGCTAACAAATTTACCGGCAAGAATCAGGAGGTGATACGCAGCAAAC TCCACTTCCCTATGGATATCCACACTCTACACCCACAGCGGCAGCCCTCCGGAGCAAACCGATGTGGTAT AGATAATGGGGGCTGCTCCCACCTCTGCCTCCCCAGTGGTAAAACCTTCACTTGCGCCTGTCCGACTGGA TTCCGAAAGGCTGGTCTTCAGACTTGTGCTAAGAGTCTTGACAAGTTCCTGCTTTTTGCTCGAAGGACGG ACATCCGGAGGATCAGCTTTGACACAGACGACCTGTCTGACGATGTCATCCCACTGTCTGACGTGCGTAG CGCAGTGGCACTGGACTGGGACGCTACTGAAGACCTCATGTATTGGACTGACATCACTACAGACTCCATT AACCGTGCTAAATGGGATGGAAGTGAACAGGAGGTCATCATAGACACCAGCTTGGAAAGCCCTGCGGGCC TGGCCATAGACTGGGTTACCCATAAATTGTATTGGACTGATGCAGGCACAGACCGGATAGAGGTGTCAAA CGCAGATGGATCATTGAGAAGTGTTTTAATTTGGGAGAACCTGGACAGACCAAGAGACATTGTGGTGGAC CCTATAGGAGGTTTCATGTATTGGACAGACTGGGGGGCCAACCCTAAGATAGAACGTGCTGGAATGGATG CCTCTAGCCGCCTGGTCATTATTTCCTCTAACTTGACCTGGCCCAATGGGCTGGCAATTGACTATGAATC TGAAAGGTTATACTGGGCTGATGCCGGCATGAAAACCATAGAGTCAGCGAAACTGAATGGAGCAGATCGA ATGGTACTGATTGGAAATGATCTCCCACATCCCTTTGGGCTTACTCTATATGGAGACCAGATTTACTGGA CCGATTGGCAGTCAAAAAGCATTGAGACCGCTGATCGCAAGACTGGACTTGGACGCAGAATTGTGCAAGC GAATCTAGAGAATCTGATGGACATTCACGTGTTCCACCGTCACCGAACCCAAGTTGATTCTGCCTGTTCC ATTGATAATGGAGGTTGCAGCCATATCTGCCTTCTAGCTCCAAAGCCCAAAGGGCACAGCTGTGCCTGTC CCACTGGGGTCAATCTGCTGAGCAATGGCAGGACATGCTCATCAGGAATGGATCGTTTCCTTATCTTTGC TCGGAGGACAGACATTCGCTCCGTCTCCCTGGATATCCCTTATTTTGCCGATGTGGTGGTTCCCATCAAT GCAACAATGAAAAACACCATTGCTGTGGGAGTGGATCCTTTGCAGGGTCTGATATACTGGGCAGACAGCA CCCTTAGGAAAATTAGCCGAGCAGCTCTGGATGGATCCAGTCACCAGGATATTATATCCACTGGCTTGGT GACCACAGATGGTCTGGCAGTGGATGCAATTGGACGAAAGCTGTATTGGACAGACACTGGGACCAATCGG ATAGAAGTAGCAAATTTGGACGGTACCATGAGGAAAGTGCTAGTGTGGCAAAATTTGGGCAGCCCTCGAG CTATTGCTTTGTACCATGAGATGGGATATATGTATTGGTCTGACTGGGGAGAAAATGCAAAGCTTGAGAG GGCAGGAATGGATGGTTCTGAACGAGTGGTTCTGATAAGCCTAAACTTGGGCTGGCCCAATGGACTGGCA GTGGACAAGGCTGGATCCCAGCTGCTCTGGGCTGATGCACATACAGAGAGGATAGAGGCCTCTGACTTAA TGGGACAGAACAGACGTATCTTAGTGTCTCCAGTGCAGCACCCATATGGCCTGACTCTGCTGGATGCTCA TATCTATTGGACAGACTGGCAAACACGTAGCATCCAAAGAGCAGATAAAGACACGGGTGGGAACATCATA GTGGTCAGAGACAATTTGCCTGGACTCATGGACATTCAGGCTGTGGACAGAACTCATGCTTTAGGCTACA ACAAGTGTGGAGATAAAAATGGAGGCTGTTCTCACCTGTGCCTGCCAACCCCTACCAGTTATTCCTGTGG CTGCCCAACTGGTATCCAGCTCAAAGATTATGGAAAGACGTGCAACCCATCTCCAGATACATACCTGCTC TTCTCCAGTCGTGGATCCATTCGTAGGATCTCCTTGGACACAGAAGACCATACAGATGTATACGTGCCTA TCCCTGAGTTACACAATGTCATCTCTCTTGATTATGATAGCGTGGAGGGAAAAATCTACTACACTGATGT CTTCCTAGATGTGATCAGGAGGTCAGATCTATCTGGCTCTGGTATGGAAACTGTCATTGGTCAGGGACTG AAGACGACAGATGGACTGACTGTGGACTGGGTTGCCAGGAATCTATACTGGACAGACACTGGTCGGAACA CCATCGAGGTATCGCGTCTGGATGGGCGACACAGGAAAGTGTTGGTCAATAATAGCCTGGATGAACCTCG TGCCATTGCAGTGTTTCCAAGGAAGGGTTTCCTGTTCTGGACGGACTGGGGACAGATGGCCAAGATTGAG AGAGCTCATCTGGATGGCTCTGACCGGAAGACAATAATTAACACTGATCTTGGGTGGCCCAATGGATTAA CACTTGATTATGACAGCCGCAGGATTTACTGGGTAGATGCCCATCTGGATCGTATTGAGAATGCTGATCT AAATGGGAAGATGCGCCATGTTCTTATCAGTCAAGTCTCCCATCCATTTTCTCTTACACAGGAGGGACGC TGGATCTACTGGACAGATTGGCAGACAAAGTCCATCCAGCGAGTAGATAAGTTTTCTGGGAGGAATAAGG AGACCGTTTTGGGCAATGTGGAAGGACTGATGGATATTATTGTGGTGTCCCCTCACAGACAGACAGGTAC TAATCCTTGTGGCATCAATAATGGTGGTTGCTCGCACCTCTGCTTTGCTCGCTCCATTGACTACGTGTGT GCCTGCCCTGATGAGCCAGATTCAGAGCCATGCTTCCTCCTTCCTGGTTATCAGCCGTTGGCCCCACACC CAACCAACAGCAGCGAGAAAAACTCAGGTCCATTTATCACTGAGAGTGATCAAGAGGAGAGCACACTTGG AGCAACACAAAGAAGTTGCTCAGATGAGATGGGTTCGCCGGTACTCTGTACATCTAATGGGCCCGTGCCA GCACATGCAGGAGACAGGCTGAGAGTACCATATATCATTGCTGGATCCCTATCACTGCTCTGCTTGTTAC TGTTACTATGTGCTCTACTCATCTACAGGCACCGACGTGCAAAGCTATCAGACCAAGGGCTAAGCACCCT CACATACAGCAACCCCTCATATCGCACATCCACGCAAGAGGTGAAAATCGAGGCTGTACAAAAAATGAAT ACAAGCCTGCATCGACATCGCAAAGAGCATTCTGCTCCTTCTGAAAGCCTCTCCCCTTTCCTCTTCTGAA TCCTCACTTTAGCCACAGGTACCAGCGGTTGCTGCTTGAGATTGGCACGTGTGTGTCTTTCCCACTGACC CCAGAATGAGTCTTCTCTAGCCCTTTAATCACTTGCCCTTACTCTGTTGTGTGGGTGCTGTGAGCATGCA CTCCCTCCCACGGGCATCTACTCACACATTAACAATATTTTGTTTGTTCTAATCATGTTTTTCTCTCTGT GTCTCCATTGCTTGATTATTTATTAACCCCCCCAATTACTACTTATTTTTTTTACACACTTAAAAGCTGG TGTTAATTTCTCTTTTTGTAGGGTAAACATTAAAACTGGCTGCCATTTCTGTTATCCCTCCTCCTGAGAG GTAAAAGTGAATCCAAGCAGCCACCCAGTCCTACATAGCTCTGCTTATGCTCCTGGACGGTTTTCTTTCC CATGGTTAAGTGGGAAGTAGGGCATAGTCTGAGAAGCTTATCAGATCTTCCTATTGTATTATCAATAATG GCAAAAGGATATATGCTGATAAGGGTATTGGCCACAAGCAGGAGCTTTGCTCCATCACCCTGATATTCAC TGCTTCCCCCAACCCAGTGATGTCCAGTTCTTTCCATGTTGTAATGTAGACCATTAGTTGACATACTACT TGGACCAGATTATAACAATGGCATGGACAGTAGTCTCTGGAGCCCATAAGCTTGCAAACATACAATGGAA GGTCACGTGCGGCCTTGACAGCCCTGCCTTAACCCATAGCCAATATCACAGTCATCTCTTTATTTGGATC CAGTGCCCTGTCCACCTATGTTTCTGTATTGAAAGTAATATAAATCTGCTTATGCGGTTTCTTTTC
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds