XB-CLONE-4353864
Clone Name: IMAGE:7026426
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Gene:
snx10
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC084512
[+]
CGTCAGTCAGTACTAGGAGCGACGAGAAAGAGGAAGTCTGTGTGTACTGCTCATTCACAATATTCTGTATTTCGGCTGTTATAGAAGTATGTTGCCAAGG
GACCAAGAAGGTGAAACCATCTCTGTGTGGGTGCGAGACCCTAAAGTACAGAAAGAAGATTGGCATTCTTATGTGGATTATGAAATCTGTGTTCATACAA
ACAGTATGTGTTTCACTCTGAAAACTTCATGTGTAAGAAGAAGGTTTCGGGAATTTGTATGGCTCCGACAAAAGCTCCAGAGCAATGCTGTATTAACTCA
ACTACCAGAGTTGCCTCCCAGAATCCCATTTTTTAAAATCAGTAATAGTCAAAATTTGGAGCATCGTGTCCGTGGATTGCAAGAGTTCCTAAACAAGGTT
TTGCACTGCTCGGTTCTGCTCTCTGACAGCCGGCTTCACCTTTTCCTACAAACCCAGCTAAGTACAGAAGAAATTGATGCCTGTGCATCGGGGAAAACAG
AATATTCAGTTTTTGAAGCCATTCACAAGTTTGCCAACTCGAACCGGCGGTTTCCTGCGGAAGAGGAAGAGAAAACAAGTCATTACTTAGATCCCGAGAG
CTAGCATCCATCGTCATTTTCTGGCAGCGTCACAGCAGATGCCGGGGAGGTGCCGTGTAAATCTGCACAAGAAAGAAAACACTAGGAGCCAAACAGCATT
TTTTTAACTTTATAAATGTCAGGGAAGTTTTTATACAGAACTTTCCCTTAAATTAAATGTTTTTCCTTCTGCGTTTAGAAACCTGGTCTGTTTACTGTAA
TAGAATCCATTTTTTTCTTTAAATATGAGCTATATAAGACATAATATGGAATGGAGCCTTGAATCATGTACCCTGTAGTGGCTTAGATAACTACTGAATT
AGCCTGAATTTAGCCACCACTGGGGTGTTTCACAGAGACCTTGCACTTTCCTTTGACAAACAGCACCCATTCCTTTCTTCTTAATATACACCACTTAAAC
TGCAATAACTATGCATTGGGGATATTAAAACCTTTCTGTACTGTCACTTGTTTGTGAATATTACATGCACTTTAGGGCTGCCCCCATGCAAAGCCAATGA
AATGTTTTGTCCAAATTATTTCATTTTTTGTTTGCATTCTTGCTTTATTACTGTGATTTATTTTTGCTGCTATTGCTGACTTAATGTATCATTTGTTTTT
TTCTGTGTAAGCCATTATAAACTTTGAATGTCACATCAAATAAAAACTGTATACAATTAATGTAGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
5' EST: CF783343
[+]taattaatccccccccccccccgtcagtcagtactaggagcgacgagaaagaggaagtctgtgtgtactgctcattcacaatattctgtatttcggctgt
tatagaagtatgttgccaagggaccaagaaggtgaaaccatctctgtgtgggtgcgagaccctaaagtacagaaagaagattggcattcttatgtggatt
atgaaatctgtgttcatacaaacagtatgtgtttcactctgaaaacttcatgtgtaagaagaaggtttcgggaatttgtatggctccgacaaaagctcca
gagcaatgctgtattaactcaactaccagagttgcctcccagaatcccattttttaaaatcagtaatagtcaaaatttggagcatcgtgtccgtggattg
caagagttcctaaacaaggttttgcactgctcggttctgctctctgacagccggcttcaccttttcctacaaacccagctaagtacagaagaaattgatg
cctgtgcatcggggaaaacagaatattcagtttttgaagccattcacaagtttgccaactcgaaccggcggtttcctgcggaagaggaagagaaaacaag
tcattacttagatcccgagagctagcatccatcgtcattttctggcagcgtcacagcagatgccggggaggtgccgtgtaaatctgcacaagaaagaaaa
cactangagccaaacagcatttttttaactttataaatgttaaggaaagtttttatacaaaactttccccttaaattaaaaggttttttccttccggcgt
ttaaaaaacccgggtcccgttttacctgtaaaaaaaaatccattttttttttccttttaaaaa
3' EST: CF783342
[+]tttttttttttttttttttttttttttttttttttttttttttttaaaaccacattaattgtatacagtttttatttgatgtgacattcaaagtttataa
gggcttacccagaaaaaaacaaatgatactttaagtcagcaatagcagcaaaaataaatcccagtaataaagcaagaatgcaaacaaaaaatgaaataat
ttggacaaaacatttcattggctttgcatgggggcagccctaaagtgcatgtaatattcccaaacaagtgacagtacaaaaaggttttaatatccccaat
gcatagttattgcagtttaaggggggtatattaaaaaaaaaggaatgggggctgtttgtcaaaggaaagtgcaagggctctgtgaaacaccccagggggg
gctaaattccggctaattcagtagttatctaaccccctacaggggacatgattcaaggccccattccaaattatggcttaaaaagctcatatttaaagaa
aaaaatggattctattacagtaaaccgaccaggttttcaaccgccgaaggaaaaacctttaatttaagggaaagttttgtataaaaacttccccgaaatt
tttaaaagttaaaaaaagccggttggccccaaagggtttcctttctggggcaatttacacggaccctccccggcattggctgtgaaccttccccaaaaaa
gaccaaggggtgccaatctctccgggaacaaaaagaaaggcctggttttcccattcccccctccaccgggaaaaccccccggtccaaattggggaaacat
tggagaagggccta
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41423.jpg) |
Usage:
Suppliers: