XB-CLONE-4353644
Clone Name: IMAGE:7026248
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Gene:
larp6
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC081356 [+]
GACAGAGTAGGCTGAGTGAAAGGCAGTGCCAGCTCCCGGAGGGTCTGGCAGGCTCTGGCTTGGCACTTGGGCTCTCCATCCCTGCCTGATAGAAGCCGCT
GAGCCCCCCCGCCACACACATAAGGGTCAGAGGGTAGAAAGACCAAAGAGGCAACAAGAGTGAGATGGAGCCCGAGAGCCAGGAGGCAAGTGAGAGTGTG
TTAGGGGGGCAGCCTGCTGGAAGTGGCTGGGAGATCGGGGCCCCAGTGCAGATCCGGGTGGCCATAGAGGCAGCAGAGGACGATGAAGCTGAAAGCCTGG
ATTACAGGGGCGGAATGGAAGGTGGAAGCTGCAGTGAGGATGATTACAGTCGCAGCGACAAATACAGCGGGGCAGCTACTAGTGGAGGAGAGAATGATGG
AGATGAATTAGACCAAGACTGGAAGCCTCCTGATGCTGAGCTGATACAGAAACTCATTACGCAAATAGAGTATTACCTTTCTGATGAAAACCTAGAGAAA
GATGCCTTCCTTCTAAAACACGTGAGAAGAAACAAAATGGGATTTGTCAGTGTTAAACTACTCACCTCCTTTAAAAAGGTTAAACACCTCACTCGGGACT
GGAGAACCACTGCATATGCTTTGAGATATTCCAACCTACTTGAACTAAATGAAGACAACAGAAAAATTAGACGAAAGACCCCAGTTCCTGTTTTTCCAAG
TGAGAACCTTCCTAGTAAGATGCTTCTGGTTTATGATCTTCACTTCATCCCAGAGCTGAACTGTTTAGGCAAGGAGCAGGAGAATGGGGGCATGCAAGAA
AAGGTCATGGAGCACCTTTTGAAAAGCTTTGGGACTTTTGGTGTTATTTCATCCATTCGTATCCTAAAACCAGGCAGAGATCTTCCATCAGATGTAAAGA
GATTTAGTAGTAGATATTCCCAGGTTGGAACCAAAGACTGTGCAATTGTAGAATTTGAAGAGGTGGAGGCTGCTATTAAGGCACACGACACATTTAATGT
AGAAAGTGATACAGAAGATGGCCTTAAGGTAGTTTTGATTGGTATGAAGCCTCCAAAAAAGAAAATACAGAAAGACAAAAGCAAAGAGGAAGACTCAAAG
AATGTGCGCAAAAACAAGTCTCTCAATAAGCGAGTAGAGGAACTACAGTACATTGGGGATGAGTCCACAGTGTATAGTTCTTCAGAACCTGACAGCAATC
CCACTTCACCTATGGTAGGTCGTAAAATCCAGTCAACCAACAAGCTAAGCCCATCTGCTTACCCAAACAACCATCTGAGCCCCAATGCTTCTCCTAGAAA
TAGCCCATGGAGTAGCCCTTGTGGACAGCGTAAAGGAGTAAAACATTCCCCGCTGGCAGATAGTATGAGCCCAGAGATTTCTCGAAAATGCACAGAATAT
TCCTCCGATAGCAGTATCACTCCATCCAGTAGTCCCTGGGTTCAGAGAAGAAGACAAGCTCAAACTGTCACCCAAGAAAAAAGCCCAGTTGGCAGCCCAA
TGTTAGGACGGAAAATACAAAATGCAGATGGATTGCCGCCTGGTGTTCTAAGGCTTCCAAGAGGTCCTGATGGTACAAAGGGTTTCCACAATGGAGGTGA
AAGAAATAAGCCTGTTCATTGTTTATGAATGCTATGCAACATTATGGAACTGGCTGTAACAGCCCCTTCTATACTGCCAGGTCCTGTAATGCAAGACAAT
GCCTCGGGACCATCCATAAGTCCAGGGCTGCACATTGCTGCTTCTGCCTGAAAGGAAATTGATTTAAATTGACTGAAATGAAGTCTGTATTTATTTATTA
TTTTTTTATTTTATATGTTAAATTTGTTGTATATTGGCAAAGCATAAGCTGCATTTTTATTTTTATTTTAGTTTTTTGTTCTAAACATGTTTAATTTTAT
CAGGCACCTGGAGCTGTAACTGTTCAATCCAAATGTATCTAAGATGTAATGCCAGAGAAAAGGAATGTGTTGCGTTTTTCCACGATCTAATGGCAATATA
TGTATAGTGGCTTCCTGTAGCTCATGGAAACAGGACAAAATGGCAGGACCCCTGCAACCTCATACAACACTGCTGTGCATCACGATTGTCAATGTTCTCT
CATATCAATTAAAATGAAATATCCTAAGCATTAAAAAGGTGAAAAAAAAAAAAAAAA
5' EST: CF783484 [+]taattaatcccccccccccccgacagagtaggctgagtgaaaggcagtgccagctcccggagggtctggcaggctctggcttggcacttgggctctccat
ccctgcctgatagaagccgctgagcccccccgccacacacataagggtcagagggtagaaagaccaaagaggcaacaagagtgagatggagcccgagagc
caggaggcaagtgagagtgtgttaggggggcagcctgctggaagtggctgggagatcggggccccagtgcagatccgggtggccatagaggcagcagagg
acgatgaagctgaaagcctggattacaggggcggaatggaaggtggaagctgcagtgaggatgattacagtcgcagcgacaaatacagcggggcagctac
tagtggaggagagaatgatggagatgaattagaccaagactggaagcctcctgatgctgagctgatacagaaactcattacgcanatagagtattacctt
tctgatganaacctagagaaagatgccttccttctaanacacgtgagaagaaacaaaatgggatttgtcagtgttaaactactcacctcctttaaaaagg
ttaaacacctcactcgggactggagaaccactgcatatgctttgagatattccaacctacttggaactaatgaagacnacagaaaaaatagacgaaagac
cccggttcctgtttttccnagtgagaaccttcctagtaagatgcttcctggtttatgatcttcacttcatcccagagctgaactgtttaggcaaggagca
agaaaattggggcttgcaaaaaaaggtcatggagccacttttggaaaaccttggggacttttgggtgttatttcatccatttcgtatcctaaaaaccagg
cagaaatctttct
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI | |
Usage:
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