XB-CLONE-4351447
Clone Name: IMAGE:7027011
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Gene:
znf592
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC080465
[+]
CGCCCAGTCCCTCTCCGCCATGTTAGTTTCCTCCGGTTCCGGCCTACTGGTCTGGCTGATTCCCGGGTCCCCCGATAGGCTCCGGGCCCAGCTGCCCCTT
GGGGCGCTGTCGTGTGATCGATGAACTGTTTGAGGCAGGATTATATACTGTGTCAATAGTACTACTGTCAGTCATGGGGGACATGAAGACTCCAGACTTT
GATGATCTTCTGGCTGCATTTGATATCCCTGATGCCACAAGCCTTGATGCAAAGGAAGCAATTCAATCTACAAGTGATGAAGCAGAAAACCATCTTAAAG
CAGCAGAAATGTGCATGGATGAAAATTTATCCTTGTCTCAGTCAATGCAAGCTTCTGATGTTCCTGCTGTCAGTGTGATCGTGAAGAACACCAGCCGCCA
GGAGTCTTTTGAGGCATCTGAAAAAGAAGGGAACCACATTGGACCAACTCTTCTTCAAAATGGGTTTCGGAGCCCAGAGGTTGGAGCAGAGTCAAATAGT
TTGGGGCAAGGGTATGGGAAATTTGAAGCCAGTTTTATCAATGGGGATAGTTGTAGAGGCTACACAGAAAAGCTGGAGACACACAAATCAGAGCCTTTAC
CTACATTTTCACAATTCAGCCCAATTTCCAGCCCTGAACCGGAGGACTCATGTAAAGATAATGGAATCCCCAGTAAGCAAAAACCAGCAGAGTCTCCATA
CTTCCCACAACCATCCATGTATGTTCCTTCTGAGGGCTGTATGGTGGATTTTTTGAGAAAGCCACCAGAAACAGAACTCAGTATGTTCGATGAATACTGC
AAAAAAGAGCAAAGGACAGACTGCAAGGAAGCAGAGAAGGGAAAAACTGAGGAGCAAACAAAGGACTTAGAGAATGTTAACAGCTTAATTGGAGGGTCAC
TTCCATTTAAAGATACTGAGAACAATAGTGTTAAAGAGGAGAAAGAATTTTCAGAAGCAATGGGCTCCTCTGCCATACCTCCTCGCCAGCGTATTAAACC
TGCTCATTCAAAGCTGTCTTCCTGTGTGGCTGCTCTTGTAGCACTGCAGGCAAAGAAAGTTGCTGTTTCTACTAAAGATGATGTCTCTAATATCACTAAA
GATACTGGAGCCCCACTAAAAGACTGTGTTAAGGGAAGTCCTAAAATGCCAAAGTCACCCAAGAGTCCCAAAAGTCCTATGGAGGGGGTTAAAAAGATCA
CTAAACCCCCAGACAGTCCTATGAGTGTCTGTAGTGATACAAGTAGCAGAGGCTCTCCATCGGTTGGTGCTGGCTCCCCACCTGCTATCCCCAAAGTGAG
GATAAAGACGATAAAGATGTCATCTGGAGAGATAAAAAGAACTGTGACCAGAATCTTACCAGATATTGAATCAGATGATCTTGTAAAGTCTACAGAAAGC
CTTTTGGCTCAAAGCTCATCACATGATGATATCAAACAGTCTGATCAGCTTGAAAGTGAACCAGATAAAACAAAGAACACTGGCAGGAGCACCCTCCATG
GTTCTAGTGTGGTAAATCCCCAGGTAGCTAATGCCAATGGCGAAAAAAAAAAAAAAAA
5' EST: CF784886
[+]taattaatccccccccccccccgcccagtccctctccgccatgttagtttcctccggttccggcctactggtctggctgattcccgggtcccccgatagg
ctccgggcccagctgccccttggggcgctgtcgtgtgatcgatgaactgtttgaggcaggattatatactgtgtcaatagtactactgtcagtcatgggg
gacatgaagactccagactttgatgatcttctggctgcatttgatatccctgatgccacaagccttgatgcaaaggaagcaattcaatctacaagtgatg
aagcagaaaaccatcttaaagcagcagaaatgtgcatggatgaaaatttatccttgtctcagtcaatgcaagcttctgatgttcctgctgtcagtgtgat
cgtgaagaacaccagccgccaggagccttttgaggcatctgaaaaataagggaaccaccttggaccaactcttcttcaaaatgggtttccgagcccagag
gttggagcaaagtccaatattttggggcaagggtatgggaaaatccaagcctgttttaacaaatggggaataattgtaaaggccaccccaaaaaaagctg
gaagaaccccctatttagaacccttttacccacaatttcttaaatttccgccccaattttcccaccccctgaaaccggaaggacttcttgtttaaatgat
aaacggaaatccccttgttaaaccaaaaaaaccctccgcaagttttccctttattccccccacaaagcaatttacacggttattttttccccttcctcca
tgtgtcttcccccccgggtgaaattttatcttttgagcaacccccctactcaggatattccgcgcacctcccttttta
3' EST: CF784885
[+]tttttttttttttttcgccattggcattagctacctggggatttaccacactagaaccatggagggtgctcctgccagtgttctttgttttatctggttc
actttcaagctgatcagactgtttgatatcatcatgtgatgagctttgagccaaaaggctttctgtagactttacaagatcatctgattcaatatctggt
aagattctggtcacagttctttttatctctccagatgacatctttatcgtctttatcctcactttggggatagcaggtggggagccagcaccaaccgatg
gagagcctctgctacttgtatcactacagacactcataggactgtctgggggtttagtgatctttttaaccccctccataggacttttgggactcttggg
tgactttggcattttaggacttcccttaacacagtcttttagtggggctccagtatctttagtgatattagagacatcatctttagtagaaacagcaact
ttctttgcctgcagtgctacaagagcagccacacaggaagacagctttgaatgagcaggtttaatacgctggcgaggaggtatggcagaggagcccattg
cttctgaaaattctttctcctctttaacactattgttctcagtatctttaaatggaagtgaccctccaattaagctgttaacattctctaagtccttttg
tttgctccctcagtttttcccttctctgcttccttgcagtctgtccttttgcttcttttttgcagtattcatcggaacatactga
Library:
Description: 10 ug of polyA+ RNA was isolated from a mixture of embryos at stage 10, 20 and 30 and primed by oligo-dT primer: 5'-GAGAGAGAGAAGGATCC(T)16VN-3' (where V=G,A,C). 5-methyl-dCTP was used instead of dCTP in the first-strand synthesis in order to get hemimethylated cDNA. After full-length enrichment, oligo-dG tailing and normalization against itself, second-strand synthesis was carried out by priming with 5'-GAGAGAGAGACTCGAGTTAATTAAT(C)13-3'. dsDNA was digested with XhoI/BamHI and directionally cloned into the pRKW2 vector. Average insert size is 1.5 kb. Library constructed using the Carninci protocol (Genome Research 2000) by Drs. W. Wu and C. Niehrs (DKFZ, Heidelberg, Germany). Vector Details | Vector Map |
Name: pRKW2
Type: phagemid
5' Restriction Site: XhoI
3' Restriction Site: BamHI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41423.jpg) |
Usage:
Suppliers: