XB-CLONE-3671641
Clone Name: IMAGE:7641188
|
Gene:
ncald
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC167579 [+]
ggactattaaatcgcccgtctgctaaactgccccgctcctcgccttgtcgctgcgctgtatgagagctgccgccgcagtcgcaagtcacggctcttcccc
tgtctcttctgctttcttcccgagcaactttgtgtgtgcggggcagcactttgcacccatgcagcagggataagatccgccgcaacgtgtgtactcggtg
taggagctgccacactggggccggtgctgcgatcagcaggaggaagtggagagaagtctttcggtttgagtgaatatattgcatcagcatggggaagcag
aacagcaagttgcgccctgaagtcatgcaggacttactagaaagcacagactttaccgagcacgagatccaggagtggtacaagggtttcttgagagact
gtccaagcgggcacctaaccatggaggagtttaagaaaatatatgggaatttttttccatacggggacgcttctaagtttgcagaacatgtattccgcac
atttgatgcgaacggcgacgggacaattgattttagagaatttattattgctctgagcgtgacttcaagggggaaactggagcagaagttgaagtgggca
tttagtatgtatgacttggatggaaatgggtacatcagcaaagcagaaatgctggaaatcgtacaggcaatctataaaatggtttcttcggtaatgaaaa
tgccagaggatgagtcaacaccagagaaaaggacagagaaaatatttcggcaaatggataccaaccgagatggcaaactctccttggaagaattcatcag
aggggcaaaaagtgacccgtccatcgtgcgcctccttcagtgcgatccgagcagtgctggacagttctgagactgtttgcattataattagcgttcgctc
attttattttattttgccaaaattacatttgttgttgtgtagccacttttgtggccaaaagtaccttccttttgtgatatcagtttgtttgttttttttc
tggattactaagaatggtgaattctgttaatcttgtgcagggcactggctgtacaataacaacctcatttcccccagatatttagtgttattcttgttgt
gctccagtgttacactaacctgtagtaccttgtagtactgcagagtctggccaaggtgttcctgcagcagttgtacagcctatttccttggctctcctgc
agtagctcagggtccatgggggcaattcagaaatactgacataatgactgtactatagtactgctgcaagatagggtgctacatagcaacattagttata
aggtaatacagagcttttaattcttctacatttcttggagtaacctccccccaggtcaggtaatatgaatacaacccatttaatactgcatttatttcac
taaacaaattcagcctctagttcctttctgttgtgtgtttttccttccctatccatcagcactgaaaatgaaaacctaaaaatgaatatggctagacatg
ctgtatttatatacatacaggtataggatctagggattttggaacctgtggtttttaagctaagggatcttttcataatttagatcaccaagtctgctaa
aaatcattcaaatattaaataaacccaatacaactcttttgccaccaatatggatttatactgcttagttgacttcaagtacaaaggactgatgggggca
gagaaaaaggatttttttttaaaaataagaactatttgcataaaatggattctgtgggcgatggcgttcccgtaattcattgctttctgggttacaggtt
tttagataagacatcccatatctgtactgagcctaatgtaccagttcagaagctcaggagccctataacagtaatgaaccaggcctttaaagttttccac
agctgctcctaaccttggatcttgttagaccatctgttgtgtcagtggcactgcacatgctcagtgcacaagttttgtaaaagtattattttggatacgc
tgtatagtgagtgggtccctaagctcaggtaagtgccagcagcacagagaatgtgcagggaatcagcagaaaagaagatggggggctactggggcatctt
tgggggcacagagagctgtggtggccttggaccggtgtagaagcccaaaacataatgtgtagcatttctaaccttgctctgtgttgagctttagtttttc
tttaacaaatcatcttagttccactatagatccaagaacttaggggttgatatatgaacattcttttcaaattttttttgcacaaacactcacaaattca
aattctgtttttaaaaaaactccaatgtttggtttttattatgcacattattatactcgcaagttcatgtagaagtccattggagttgtcctaaagcaaa
atccaagccatttttcaatttaagattttctatatttttgggggggttgagctataaacttcgaaattcagagtattcaagtttttcttcaatgatttta
ttcaatcaggttttttttatatttggatttaatcgacattcaaaaacttacaaatttaaattttgataaataggcccattaaaggttttagttaggaacc
caagaattgaatgtaacaaaaaatattgaaaggcctctctcttttcttggttggcacatttaggctataatcaagttatcatttctttatattgttgtgg
aaatgtaacacaaatacacttgttagcattctaactacctgggtagaatatttctgacgtttccacctcattttgcctgaattcttcagctttccataga
taacaatgggcccacgtctattttatagatcctgtgtaaatggataagacgccatgttatgcctgggggtggctttcattttccttcagacacaaaacga
aaaaaattgagacataacttgtatagtgaattactttgagtcatatttgcccttgtatatactttgtataccttctattgctgggtgcttgtgttttccc
tgccaggatgaaagcaggattgaaagacaactataacaaacattctgtacatgaccactgggggtgctgtttggtaacagtctatggagaaaacctctag
taaagtaatcaatatggcagctctcattccttcgtgtaaatgcatggaagaactattttgtgtgtgcaagcttttacaaatacccacaatcatttttcct
tcatacgtttttgtaataaaccatcaggtaaattaaatctactgagtttttaattttccctggccccccagcattgaaggggcccctcaagggaaaacat
agcttaaagctgcgatagcatatcatattgtgtaacgagcattctgctattttcactatatatttacttatatacaacagtgatgtccaacctgcaactc
tccagctattgttgcactgcaactctctgcatcccccccttagagaagggccctaggcttcctgcattgccaggggccccgcctctccatatttaaacct
ttggatgctctttgcatcttttgggaggttttctattttagttttgctttaaaatattccagcagaatcccccaaatattgtagaagtgcggtaacagtc
cctgaaagtgagtgacgtgggtccatgcagtttgtcatgcacagaattcaggccaatggaactagagattttgaatatgtggaggggagacctcatcaaa
ttgaagtttacctttaaattaatatttaatatgttatagatggacctgctgacattggatttatattttgtttaataagccttcctgctctggctttttc
caagttgaaaatgtcatgtgatcatcggggttagtgatatcggcagccatatgagcaatggcacattccatgattctgggcacattgtcgcccaagcact
taataactacctattgcctggaatcactccctattgattttagtgcaatctttgggcccatgagtgtacttgcctttcaggcaggtgttgctcaaaactg
atcctctgattttcaagtgaattgaaattggcattgaaatcaaggacgagtgattccaggccccccccagatcttgtagatgcccagattcatgttgttt
gctgttataataaagctggccgtacattaaaagatctgctcttttggcaaggcccccatacgagcagaacttgcccaccacaaccaatgggggatacaag
cctttagggcaaggaccacattaccaagccaatgcagtccttaatctgatgggaaaatccaatctgatgatcaacatctggattatttggcctcccatcg
ataaagaacaaatatggcaccataaactgtttttttaaaaatgtctgaagatccctttccatctgtgtcagtgtgaatcacaaccataaaacaatcacat
aaccgctggaaattgccttctgctgcttttcccagtggatacgctgttccattgttttactggtggccaataggaaaatatttttggccattttgccacc
atgctggaggagattaagcgcaggctacaaaacataacatgcacttgtgttgaactagaacttgtggaagtgcagggtgcccatttctgggctaatataa
tatattacctgtgtattacagatggagcacactatatcgagacatttggctcagatggcccattatgtgattccgttaaaatagatgatcacactttttt
tttttttattttagcacataatgctttgatatgtaagccacatgagccatttgatccttgccctgtctgcatacagagctgcactacatgattccaggaa
ggaagggttttttttcacgtaggctgtccaattaggttcagcctttcaagaaattgtaccaggtctcctctgtctttgtgtgatatcatcactccatcct
aattttattataatccggcccccgtgtaagtggtatcatggacgctcaacccactacaaagaaagtaactggacagcagtgatgaacaccattgtctgaa
cttctcacttcatttttatgggattcagcggccaaattaattcaaaattttaaacaatctctatatccgttacctgctgtgtgtaacctgatccatttca
aaattactgatttttggtagggacatgctcccatggtagtaaaacagtaaaaaaaaaagacttattgtgtaacagttggtttcctatgaggaacgcccaa
cctttggccctccagctgttgttgtagtacaactctcagaattccaccaacagccaaacgggcacttgttctctaattccctgcttgcaacactgtcttc
ctacaatgattcagttcttgggatccattctgtcggagaatggcgaaaaccccgcatcctcattgtgtctcctcctgttgataaggacgtcaacccttgc
atgaaatattttccatttgcccatgagttggattttgtgtttatataaaatatttattaccaaggttcacattgatcgtagcctttgtgacaataaatgc
aaccaaatatcacagaccgcgtcggatgggtaaattctgggccgagccaccaaagtgacttgtatcagcgtttgcacatcgtcttcctctcatgtattca
cacactctgaatatgttgtttggggttttttccgggttgttatcaagggcaatgtacaattacaaaataaatgtctgttttacaaaaaaaaaaaaaaaaa
aaaaaaa
5' EST: CX795245 [+]gactattaaatcgcccgtctgctaaactgccccgctcctcgccttgtcgctgcgctgtatgagagctgccgccgcagtcgcaagtcacggctcttcccct
gtctcttctgctttcttcccgagcaactttgtgtgtgcggggcagcactttgcacccatgcagcagggataagatccgccgcaacgtgtgtactcggtgt
aggagctgccacactggggccggtgctgcgatcagcaggaggaagtggagagaagtctttcggtttgagtgaatatattgcatcagcatggggaagcaga
acagcaagttgcgccctgaagtcatgcaggacttactagaaagcacagactttaccgagcacgagatccaggagtggtacaagggtttcttgagagactg
tccaagcgggcacctaaccatggaggagtttaagaaaatatatgggaatttttttccatacggggacgcttctaagtttgcagaacatgtattccgcaca
tttgatgcgaacggcgacgggacaattgattttagagaatttattattgctctgagcgtgacttcaagggggaaactggagcagaagttgaagtgggcat
ttagtatgtatgacttggatggaaatgggtacatcagcaaagcagaaatgctggaaatcgtacaggcaatctataaaatggtttcttcggtaatgaaaat
gccagaggatgagtcaacaccagagaanaggacagagaaaatatttcggcaaatggataccaaccgagatggcaaactctccttggaagaatcatca
3' EST: CX795244 [+]ggaaaacagacatttattttgtaattgtacattgcccttgataacaacccggaaaaaaccccaaacaacatattcagagtgtgtgaatacatgagaggaa
gacgatgtgcaaacgctgatacaagtcactttggtggctcggcccagaatttacccatccgacgcggtctgtgatatttggttgcatttattgtcacaaa
ggctacgatcaatgtgaaccttggtaataaatattttatataaacacaaaatccaactcatgggcaaatggaaaatatttcatgcaagggttgacgtcct
tatcaacaggaggagacacaatgaggatgcggggttttcgccattctccgacagaatggatcccaagaactgaatcattgtaggaagacagtgttgcaag
cagggaattagagaacaagtgcccgtttggctgttggtggaattctgagagttgtactacaacaacagctggagggccaaaggttgggcgttcctcatag
gaaaccaactgttacacaataagtcttttttttttactgttttactaccatgggagcatgtccctaccaaaaatcagtaattttgaaatggatcaggtta
cacacagcaggtaacggatatagagattgtttaaaattttgaattaatttggccgctgaatcccataaaaatgaagtgagaagttcagacaatggtgttc
atcactgctgtccagttactttctttgtagtgggttgagcgtccatgataccacttacacgggggccggattataataa
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 0.5-1.5 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn3 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: