XB-CLONE-3643303
Clone Name: IMAGE:7658574
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Gene:
rel
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC136176 [+]
CGCAGGGGAATCGCTGGTTTATGAGCGTGTGCTGCTGGAAGTTCGCTGTAGCAAGAGAAGCTCCTCTGCCTCAGCCCTGATATCTGTTCATTGAAGGTGC
GCATTTGTAGCTTGGCAGCAGGAGGGCTGCGGGGAATAGAGTGGATACGTTATAGAAGGCACAGGCTGTGGATGCTGAGTTAGGGGGTCGCGTTTCCTGA
AAGATGCCCAAGCTGTAAATCCTGACCCTTCTGTGTCTCTGTGACTGTTGCTGGAAGCTGAAGGATACCTGCCGCCCAAGGACACTTTCCCTTTACTTCA
CTGCCCAGGTTCCGGCTGTCTCTCCCCTCACTGGCTGTCTCTCCCCTCACTGGCTGTCTCTCCCCTCACTGGCTGTCCCTTACACAGAGCACAAGATGAC
TGCACAACATTCTCAACATGGCCGTCTCCATACCACTTTTGGTTTGAACGAACCCTATATTGAAATATTTGAACAACCCCGACAAAGAGGGATGAGATAT
AGATACAAATGTGAAGGCCGATGTGCTGGCAGCATACTTGGTGAGACTAGCACTGAGAACAACAGGACATATCCATCTATCAAGATTATGAATTATACTG
GAAAAGGGATATTAAGGATCACGCTTGTTACAAAAAATGAACCCTACAAACCTCACCCCCATGACTTGGTTGGCAAAGACTGCCGGGATGGATATTATGA
ATTAGAATTTGGTTCGGATCGCACAGTTTTATGTTTTCAGAACTTGGGTATTCAATGCGTTCGTCGAAAAGAAGTCCGAGAGGCAATCCACACCCGAATA
ATGCGCAAAATGAACCCTTTTGGTGTACGAGAGGATCAGCTGCTCACTATTGAAGATTACGACCTAAATGTTGTGCGCCTGTGCTTTCAAGTCTTTCTTC
CTGATGAACATGGCAGCTACACCAGAGCTCTACCGCCCGTTGTATCCAACCCAATTTATGATAACCGTGCTCCAAACACAGCTGAGCTGAGGATATGTCG
TGTCAACAAGAACTGTGGAAGTGTAAATGGTGGAGATGAAATATTCCTCCTGTGCGATAAAGTTCAGAAAGATGACATAGAAGTCAGGTTTTTTACAGAC
AACTGGGAAGCCAAAGGGACATTCGGACAAGCCGATGTACACCGTCAGGTAGCCATTGTCTTCAAAACGCCCCCATTTCATAGATCCATCACTGATGCTG
TAACTGTGAAAATGCAACTTCGAAGGCCTTCTGACCAGGAGGTCAGCGAACCAATGGATTTTAGATACCTACCTGACCCAGAAGACCCACATGGAAACAA
GTTCAAAAAGCAGAAGACCTCCGAAGTGATGCAGAAGTTCAAATTTGAAATGCAAGATAGACGTGACCTAAATCCTCCCACATTCGGTGTAAATCCAATT
AAGAGAGAACATTTCACCAATTCATCCGGGTGTGGACAACGTTTCCTTCCAATGCTCCCAACAAAGCCAGCTTGTGCAACTTATAACAATACCACCTCTC
CACAATCAAGGGTGCCAAAATTCAATTCAAATATCCAGCCAAGTCTTTCTCAGTTGCCTGTTCTAAACTCTGCCATGCAAGATAACATGCACAGCACAAG
CACCATGAACATCATGGAAACTTTGAGGACAGCTCCATCCCAGCCAAACACTCACAAACTCCCATACACTGAGCCCACTCACCCTAGACCTGAGGTAGCC
ACCAGCAATACTACCAGTATGTTCAGACCCTTTTTCAATTATAATGTTCCCAGCTGCCCTAGTGTTCCGTGTGAAATTGATTTATATAAAGCACCTTCAA
ATCACATGGATATAAGTGACATAGGTCAACTGACCAGTGCAGTAAATGCTCCCAGTATCTCAAGTTTATGTAATGGTGTTCAGCCCATTAATATATATTC
AACACAGTTTAGTTACCACCATGCAATGAGTGAGTCAAGGCTACCAGACACCAGCGGTGCCCCTCCGCACAGCACATCTATGGGCCATGAAATTTTCTCA
GACATCGTACAAAGTGATGACAATTATATTAGTGTGGAATCTGAACTTGATAGCATATTGCAGAACTTTGGAAGCTCAAGTGAAATGTTACACGACTAGC
GATGGCTCAGATGCTTGGAAGGTCTCAATCCGGCCTTGTTGCACTTTCGGTAAGAAAGTTTACTGCCGTATCCATGATATGGGCCCCTATTTGACATGTT
TGGCTCCTTTATACAGGACCCCATTTTAACCCTGAAGTCCATGAAGTATATGGCTTATAACTATTATTCCGAAAGGACATAATATTCTGTGCTAAACCTT
AGTTAGTGTCTTGCCCTTGCAAAGCAGTATCTGGCATAATGTAAGGATGGGCAGCTTTGTTCCAAGTTACCCTCATTAAAGTGCCAGTAATGTGCTATAA
GTGGAAGAGGATCATCTCCTGATGGTCATTGGGACCTTTTGTACTGTTTTTAAGCACTGCACTATATTAATATCCTTTATATATAGTAATTTTCCATCCA
GTAGCGAGCTGCTTGACGCAGTAGTTCTGGGATGGAAATAATTATTAGCACAATGTAATGACTGTGTCATTGTATACAGATCTAGGCTATAAAAACATGT
CAAAATGTATATAATACTTCCAATAAGGCCTAATTATTAACTGTGAGATTAAGGATTTTTTTTCCATTCTAAATGAATGTTCAGTGATATTGTGCAGTAA
GTATGAGGCAAGTGTTCTCCAAAGATAACTCTATTTGCCCCTTTGTTAGAAGTCCCCAGTCTGACATTCACCTAAAGATTACGACTCACAGAATTTTGTT
GCTGTAAAATTTCCTGTAAAAAAGGAATGGGGACAAACATTTGAAATCAGCCAGTGATGTCTACCTTCCGTGGTAATGACCAGCAGCCTACAGATGTCTT
TTTAATGGGGGACATGTAAGTTTCATTAGGCCGTTAGCTAAAAGAGATTTGGATTAACAGTTTCATTGTTAATTCAATTGAATTCCAAAGTTCATGAGTT
CAGAAAAACAGAAGATTTCTTTATTGTAGCCATACAGGAGCCTAATGTAGGGCTGATCCTAATCATTGTCCTTATAAAAGTATAATACATTACAGATTTA
TCAATGTTAATGTTCAATGCGCAAAAACTCCCAAATTCAACTTAGATGTTTAATATTTATAAAGCACAAAAAATACATAAAAAAAAAAGACTCAAATGTA
AGCATTCGGCACCTAAAAGCGTGCAAGTTCATTTAGAAGTCAATGGGAGTTCTCCTAGGCAATTAGTTTTTTCTATCTTTACCAAAGGTCGAGATAGAAA
ACAAATTTCACCATGAGAAAATGTAGAAATAGAGAGTTGATCTCAACATTTTTTGTTTCAAGATTTAATAGACTGACTCAATAGACACAAAGCAGCCAAT
AGACAGCAATTAAATGAATCCTGTACTTTTTCTTTTATTAGCATCGTGCCCGTTTAGATGTTTTTTTTTATCCTTTATTCCAGAAAGGATAATGATTTAC
ATGTTTTCTAATTTTCTGCCACTGAGTGGAGGTTTCTTTATTTTTGCTAAGCAAGGTGTCGCTGATACCCCTGTGCGGGTGCGGCTATACTCATTTCCCC
ACTGGGAATGTACCTACAGGTATGGCATCCGTTATCCGAAAGCCTGTTATCCACAAAGCTGCAAATTGGGTTATATCCCGTTGGGCAATAATTATTTTTT
AGTACACAAAATATGGAGATCCAACTTAAGTAAAGATCCCTTATCTGGAAAACCCCAGCCCACAGCATTCTGGATAACAGGTCCCATACCTGTACATCTA
TTTTATATTTAGATTTATACATATAAAGAGTAGGAAAATAAATAGGACTTGGGTGTATCTTGATGAAAATGTGTTCTACAAAATTTATGTTTATTAAATA
AACACTTTTATATACATACATACATATATATATATATATATATATATAGATACCAAAGAGAGTTTGCATCCTTACTAAGTTAACTGTTACTAAATTGTGT
GTACATTTTGTGATTTATATAAACCTGCTTTTTCAATTCTGTATTTTTAAAATAAGAGCAGATTTTAGGGATTTCTAATAAGGTCTCTTAAGTGGAACCT
TCCATTTCCTCTGGAAGAGCAGGTGTCCATGACAATGATCTGTTGTATGCAGAAGGGTCTGATAAAGGGACACTTTCCTGGGCTTGTGATTAGCAATCAA
TATTTGTTATTTGGGAATTGCAAAGATTTAGAATTGAATGTATATTTATTGTTTCTTTGTTTTGCCCTGTGCCTCCTATGAAGAGATTACTGACTCCGCT
TGCACATGTAGGAGCTTAAAGGAACAGGGGTTTGGTGATTTAAAAATGTATCCCAATGTATCCAGTAGCCATCTGTGAGGTCAAGAATGACGCCCAGGGT
TCCCACATCACCCATGCACCCATATATCATTACTGAAAGTGGGGTATGTAATGCTTAGTTTCACAATTCCACATGCCTGAAGTCCAGGGGCGCTGGGGTA
GGGTGCAGGGGAAGAAGGCACTGGCATCACTGAAGTCAAAGGAAAGGACCAATAAAGCTCAATTTGTTTTATAATTGTTTTAATTATTTCTCTACTTTTT
AAAAATTCTCTTTCCAGTCACCTGGCCCCTCCCTATTTCAGTGACATCACTTGCCCTCTTGCCTCTGGCAAGGCTTTCCGAGCACAGGTGCTAAGGGGCA
GATGACTATTAGGGTTTTTGGGTGGGTAGAGCACTCATGAACTACTGCACACAGAACAACTGATACTTTTCCAGGGAATCCAAGATGACAGTTCAGCACA
ATGCCAGTTTGGGTGCAGGGAACCGGCAAAGCTACGGATAAAAGAAAATGATTCTGCTTTATTTGCTCTTTAGAGTAAGGACACAATACTGTCCATTCAT
TGGCAGATATAACCTAGCATGTATATGTGCCCTTGGTTTGTGTGTGTGCACCATGACTCGTATGAGCCAGAGGGACCTCAAAATAGTATGGGATTTTTTT
ATAGAGACTTGCAGTGTTCAGTGGTTTAGTTTTCCTTTAAGCTCATACAGCAAGCTCACCCACTGCAAATTATTCTTCTGTCTGACTTTAAAGTTCTCAT
GTATATATGTACCTGTATATGAACCTAATATCAAACAAGGAAGCTTTTAATCAGAATTGCAATGTTACAAATATATTTTTTTATAATCTGACAAAAATCA
ATAAATTGTTTTACATGATAAAAAAAAAAAAAAAAAA
5' EST: CX837568 [+]cgcaggggaatcgctggtttatgagcgtgtgctgctggaagttcgctgtagcaagagaagctcctctgcctcagccctgatatctgttcattgaaggtgc
gcatttgtagcttggcagcaggagggctgcggggaatagagtggatacgttatagaaggcacaggctgtggatgctgagttagggggtcgcgtttcctga
aagatgcccaagctgtaaatcctgacccttctgtgtctctgtgactgttgctggaagctgaaggatacctgccgcccaaggacactttccctttacttca
ctgcccaggttccggctgtctctcccctcactggctgtctctcccctcactggctgtctctcccctcactggctgtcccttacacagagcacaagatgac
tgcacaacattctcaacatggccgtctccataccacttttggtttgaacgaaccctatattgaaatatttgaacaaccccgacaaagagggatgagatat
agatacaaatgtgaaggccgatgtgctggcagcatacttggtgagactagcactgagaacaacaggacatatccatctatcaagattatgaattatactg
gaaaagggatattaaggatcacgcttgttacaaaaaatgaaccctacaaacctcacccccatgacttggttggcaaagactgccgggatggatattatga
attagaatttggttcggatcgcacagttttatgttttcagaacttgggtattcaatgcgttcgtcgaa
3' EST: CX837567 [+]atcatgtaaaacaatttattgatttttgtcagattataaaaaaatatatttgtaacattgcaattctgattaaaagcttccttgtttgatattaggttca
tatacaggtacatatatacatgagaactttaaagtcagacagaagaataatttgcagtgggtgagcttgctgtatgagcttaaaggaaaactaaaccact
gaacactgcaagtctctataaaaaaatcccatactattttgaggtccctctggctcatacgagtcatggtgcacacacacaaaccaagggcacatataca
tgctaggttatatctgccaatgaatggacagtattgtgtccttactctaaagagcaaataaagcagaatcattttcttttatccgtagctttgccggttc
cctgcacccaaactggcattgtgctgaactgtcatcttggattccctggaaaagtatcagttgttctgtgtgcagtagttcatgagtgctctacccaccc
aaaaaccctaatagtcatctgccccttagcacctgtgctcggaaagccttgccagaggcaagagggcaagtgatgtcactgaaatagggaggggccaggt
gactggaaagagaatttttaaaaagtagagaaataattaaaacaattataaaacaaattgagctttattggtcctttcctttgacttcagtgatgccagt
gccttcttcccctgcaccctaccccagcgcccctggacttcaggcatgtggaattgtgaaactaagcattacataccccactttcagtaatgatatatgg
gtgcatgggtgatgt
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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