XB-CLONE-3642135
Clone Name: IMAGE:7659279
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Gene:
pcdh10
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC121910
[+]
CCAGGAGCTGGGGAAGACGAGGAACTGCACTCAGAATAGAAATACAGATAAACCCTGAAAGTGAAAATCGTTACGGGAAGCAGCATGGAGTGTGTGTGCA
GCATGGGAAAGAGCAGGCAATAAAGTGAATGAAAAGTAACCGGTGCCTTTTTCCTGTTCCTGTGCAAGTGAATCTATCATTGATACTTATCAATAATTGA
AATCTGAGCATCTCCAGCGGAGACACCATGTGCAGTGGATGTAACAGGCTATGGGCAATGGAAGGGGTCACACCAGTGCCGGAGAAATAAAACTCTCTGC
TTTTGGATGTATCTGAGAGGGATTTGTACTGAATCTTGTGGTGACTGCAAGGAATCCTGATGAGGGGACGCCTGGCTGCATTTCATTTACACTGAGCCAG
TAGCACTGTGTGCAAAGGATAAAAAAAGTGCACTTTTAACCCATCAGCTTATCTTTTTCCTTCCATATTCTTTTCTACCTGGCTGGTTTACACTGCTACT
GTGTAGGAGATGCTGTGGTTCTTATTGCTACTGTGCGCTGCGGAGGGGCTTCTCGCCCAGCTTGCCTACAAGGTGCAGGAGGAAAGGGACCATGGTACTT
TCGTGGGGAATATCGCTGAGGATTTGGGCTTGGACATTACAAAACTTTCCAATCGCAGGTTCCAGACTGCGCCCAACTCAAGGACTCCTTACCTGGAGCT
GAACCTGGAGAACGGGGTGCTGTACGTTAACGAGAAAATAGACAGGGAGCAGATCTGCAAGCAGAACCCATCGTGCATGTTGCACTTGGAGGTCTTCCTG
GAGAACCCCCTTGAGTTCTTCCGAGTGGAGATCGAGGTGCTTGACATCAACGACAACCCTCCGGTTTTCCCCCAATCTGACATCCAGGTGGAGATTTCCG
AGAGCGCCACCCCAGGGACCCGCTTCCCCCTGGAGAGCGCCTACGACCTAGACGTGGGGAATAATTCCCTGCGCACCTACGAAATCACCACCAACAGTTA
CTTCAACCTGGATGTACAGACCCAAGGGGACGGCAACAAGTTCGCGGAGCTGGTACTGAAGAAGCAGCTGGACAGAGAGCAGCAAGCCCTGCACAGGTAC
GTCCTCACCGCCATTGATGGGGGCACCCCCCAAAGGACAGGGACCGCTCTGCTCACCATCAAAGTGCTGGACTCCAATGACAACGTACCGGTGTTCGAGC
AGCAGATCTACACCGTGTCTCTACCAGAGAACTCGCCCCCAGGTACCATGGTTATACAGCTCAATGCCACCGACCAGGATGAAGGTCAAAATGGGGAGGT
GGTGTACTCTTTCAGCAGCCACAATTCCCCCAAGGTGCGCGACATTTTTGGCATTGATCCTCGAACTGGTCGAATTGAGATTATAGGTGAACTCGACTAC
GAAGACAGCGGCTCCTACCAGGTATATGTGCAAGCTAAAGATCTGGGGCCAAACGCTGTGCCTGTGCATTGCAAGGTGCTGGTAAAGGTGCTGGACCTCA
ATGACAACCCACCAGAGATCAGCTTCAGCACGGTAAAGGAGTCGGTGAGTGAGAGCGCCTCCCCGGGCACTGTGGTGGCTCTGTTTAGCGTCACAGACAG
GGACTCGGAGGAGAACGGGCAGATCCATTGCGAGATCTTGGGAGACGTGCCATTTCGCCTGAAACTCTCCTATAAGAACTATTACACTATTGTGACAGAA
GGGACCTTAGACCGGGAGGCAATGGCCACCTACACTGTTACAGTTCTTGCCAGAGACAGGGGCACGCCGCCTCTCAGCTCCACCAAGTCCATCCAGGTGC
AGGTAGCGGACGTGAACGATAACTCCCCACGCTTCACTCAGGCCATTTATAACGTGTATGTCATAGAGAACAACGTCCCCGGTGCTTATATCTCAGCAGT
AAGTGCCACAGACAAGGATGAGGAAGAAAACGCCAACATTTCCTATTACATTCTGGAGTGTGACATTCAGGGTATGTCAGTCTTCACCTATGTATCCATC
AACTCAGAGAACGGCTACCTCTACGCCTTGAGGACATTTGATTATGAACAGCTCAAGGATTTCAGTTTTATGGTTGAGGCTAGGGATGGAGGGACACCCC
CTCTATCCAGCAATGCAACTGTTAATATTATCATTGTGGATCAGAATGATAATGCCCCAGCTATTGTGTCCCCCCAAGGCAGGAATGGCACTGCCAAAGA
ATTTCTCCCCAGGACAGCTGAGCCTGGTTACCTTTTCACCCGTGTAGTTGCTGTAGACTCGGACGAGGGGGAGAATGCCAGACTCACGTACAGTATTTTA
AGGGGTAATGATATGAGTCTCTTTCGAATGGACTGGAGGACAGGCGAACTAAGGACTGCACGTAAAATAACCAATAAAAGAGACCCACACAGGCCATTCG
AGTTGGTAGTGGAAGTGAGGGACCATGGCCAGCCACCACTGTCTTCAACTGCCCTCATCCAGGTGCAGATTGTGGACAGCTCGGTGGAAAGGCAAGGGGG
TGAGCAGAGGCCCAGCAGATCCAGTGACACAGCCTTGGACCTAACTTTAATTCTTATAATCGCTCTAGGTTCTGTCTCCTTCATCTTCCTATTAGCTATG
ATTGTACTGGCCATCAGGTGCCAAAAGGAGAAGAAACTGAACATTTACAGCTGTTTGGCTAGTGACTGCTGCATGTGTTGCTGCTCTTGCTGTAGCAGAC
AAGCCAGGGCTCGCAAGAAGAAGCTCAGCAAGTCGGACATCATGTTGGTGCAGAGCTCCAATGTGCCCAGCGCTACCCAAGTGCCTGTGGAGGACTCCAG
CAGCTTCGGGTCTCACCATCACAACCAGAATTATTGCTACCAAGTTTGTCTAACTCCGGAGTCTGCCAAAACTGACCTGATGTTCCTCAAACCTTGCAGC
CCCTCCAGGAGCACTGACACTGAGCACAACCCCTGCGGAGCCATAGTGACAGGGTACAGTGACCAACAACCAGATATCATTTCCAATGGAAGCATCTTGT
CCAGCGAGAACAAACAGCGCACTGAACTCAGTTATCTAGTTGACAGACCACGACGGGTAAACAGTTCTGCATTCCAAGAAGCAGACATAGTAAGCTCTAA
GGATAGTGGTCACGGAGACAGTGAACAAGGAGACAGTGATCATGACGCCACAAATCGAGGTCAATCTTCTGGCACGGATCTGTTCTCTAACTGCACAGAA
GAGTGCAAAGCATTGGGTCACTCAGACCGCTGTTGGATGCCTTCCTTTGTACCTTCTGCTGATGGCCGCCAGGCGGCAGACTACCGCAGTAACCTTCATG
TGCCCGGTATGGACTCGGTTCCGGACACAGAGGTGTTTGAAACACCTGAGGTGCAGCCCGGAGGGGAGAGGTCATTTTCAACTTTTGGCAAAGAGAAGGC
TTTGCAAGGGCTGACAGGGGTTGGAAATGGAAATGGTAATGGAGGAGGCAGCAACCAGGAGAGAAAGGAACTCGATGGCCTGCTCTCCGGCACCAGAGCG
CCTTACAAGCCTCCTTATCTCAGTAAGTACATATTATGATCTTAGTGGTGTAATAGCAGGAGAAGCACAAACTAGATCTCACTTTGTAGGCAATGTTGTG
CCAACTAAATGCTCATCACCAGCAGGGAACAGATGGGCTCTGTGTGTGAATATCCTTGAAGACTCAGGTCATGCAGTCACCTATTTACTCAATATTTACT
ATTTATGAGTGAGTATGAACATGTGCATGGTGCACTTCATACTAACCAGTGGACACTGATATTTTATGACAGACTCTTTTTTGTATAAGTTATATACTAT
GTAGACTGTTTGTTTAAGGGAAAAGGGAAATAAATATGGATTATGTTGAAAACAAAAAAAAAAAAAAAAA
5' EST: CX838881
[+]ccaggagctggggaagacgaggaactgcactcagaatagaaatacagataaaccctgaaagtgaaaatcgttacgggaagcagcatggagtgtgtgtgca
gcatgggaaagagcaggcaataaagtgaatgaaaagtaaccggtgcctttttcctgttcctgtgcaagtgaatctatcattgatacttatcaataattga
aatctgagcatctccagcggagacaccatgtgcagtggatgtaacaggctatgggcaatggaaggggtcacaccagtgccggagaaataaaactctctgc
ttttggatgtatctgagagggatttgtactgaatcttgtggtgactgcaaggaatcctgatgaggggacgcctggctgcatttcatttacactgagccag
tagcactgtgtgcaaaggataaaaaaagtgcacttttaacccatcagcttatctttttccttccatattcttttctacctggctggtttacactgctact
gtgtaggagatgctgtggttcttattgctactgtgcgctgcggaggggcttctcgcccagcttgcctacaaggtgcaggaggaaagggaccatggtactt
tcgtggggaatatcgctgaggatttgggcttggacattacaaaactttccaatcgcaggttccagactgcgcccaactcaaggactccttacctggagct
gaacctggagaacggggtgctgtacgttaacgagaaaatagacagggagcagatctgcaagcagaacccatcgtgcatgttgcacttggaggtcttcctg
gagaacccccttgagttcttccgagtgnagatcgaggtgcttgacatcaacgacaaccctccggttttcccccaatctgacat
3' EST: CX838880
[+]gttttcaacataatccatatttatttcccttttcccttaaacaaacagtctacatagtatataacttatacaaaaaagagtctgtcataaaatatcagtg
tccactggttagtatgaagtgcaccatgcacatgttcatactcactcataaatagtaaatattgagtaaataggtgactgcatgacctgagtcttcaagg
atattcacacacagagcccatctgttccctgctggtgatgagcatttagttggcacaacattgcctacaaagtgagatctagtttgtgcttctcctgcta
ttacaccactaagatcataatatgtacttactgagataaggaggcttgtaaggcgctctggtgccggagagcaggccatcgagttcctttctctcctggt
tgctgcctcctccattaccatttccatttccaacccctgtcagcccttgcaaagccttctctttgccaaaagttgaaaatgacctctcccctccgggctg
cacctcaggtgtttcaaacacctctgtgtccggaaccgagtccataccgggcacatgaaggttactgcggtagtctgccgcctggcggccatcagcagaa
ggtacaaaggaaggcatccaacagcggtctgagtgacccaatgctttgcactcttctgtgcagttagagaacagatccgtgccagaagattgacctcgat
ttgtggcgtcatgatcactgtctccttgttcactgtctccgtgaccactatccttagagcttactatgtctgcttcttggaatgcagaactgtttacccg
tcgtggtctgtcaactagataactgagttcagtgcgctgtttgttctcgct
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41414.jpg) |
Usage:
Suppliers: