XB-CLONE-3637128
Clone Name: IMAGE:7662509
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Gene:
mhc1-uda
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC154723 [+]
GTATTTTTGCAGGGAGCATGTTGGGACGGCTGCTTCTCCTTGTGTGCCTGTTGGTGCCGAGTGTGAGGCCAGCCGCTCACACCCTGCATTACGCTTTCAC
CCTCGTCTCCAATTCGGCCGGTCAGTCCTACTTCGTTGTCGCGTTTGTGGACGACGCCCAGATAGGGCGGTACAGCAGTGACACGCAGAAGGTGGAGCCT
CTGCTGGACTGGATGAAGGAGCGCCTTGAGCCGCAGCACTGGGAAACCATGACTTCCTGGGGCAAGCATTACCAGAACTGTCACACCAAGGATATGGGCT
TCTTTATTGATCGCTTTAACAATACATACGGGGACAGAGGCCCGTTCATCTACCAGGTGAACTTTGCCTGCGAGGTGCACGAGGACGGCGGCGTCAGCGG
ACACGAGGCCTTTGCCTTCAACGGCAACGAGTTCATGTTCTTCGATAAGGGCAACATGCGGTTCGTCCCGGTGAGACGCGAAGCCGAGGTCATAGCCCAG
GTGTGGAACGGGCAGCAGTTCAGCGCCATCAAGCACAAGAACCACATGGAACAGGACTGCGTCCAGTGGATGGCGCTCTATCTGAGATACGGGAAAGGCC
GACTGGAGAAGAAAGTTCAGCCCACGGTGAAGGTTTTCAGTCGGGAGTCGGACGGCGCGACTAAGCTTCACTGCTGGGTGTATGGGTTCTATCCCCGAGA
CGTGGATGTGAGGTGGGTGAGGAACGGGACCGAGGAGGACTCAGAGGAGCACAAAGAGATTCTCCCCAACCCCGACGGTACCTACCAGATCAGAATCACT
TTGACCATGCAACCGGCAGACGTCGACTCGTACTCCTGCCACGTCGATCACAGCAGCGTCAATGGGACGCAGATTTACAAACTGCCGGAGCCGGACAAAA
GAGGTCACGTCATCGTTATCGCTTGTGTTGCTGTCGTCTTCATTATGGCTGTTGCCGTTGTTGTCGCCGCTGTACTTAAATTTAAACGTCGATAACGGAG
AGCGAATACGGGAGGATGAAAGCAAAGCCTGTAGTTGCCTTATGAACACCACGCACAAGTGCCGCCTCGCCTTCACACTCTCTCCATGCCAAGAGATGGG
GCACATTTTAGACCAGTTCCTCTGGTTGGTGGCCTTCAAAATGCCTTCAATGTCTTGGTGGCCTTCAAAATGCCTTCAATGTCTTGGAGAAGGCCAAAGA
GACATTTAATTTTGTATTTCCCTCTGGCAGTTAGTTGGATAATATACTCCTCTCTGGTTGACTGATATTTTGGGTGGCCCATTCCACTGACCCCGGTATA
TAAGTTTTGGGTGTGTATGAGGCCGATTGTCTTTTGGATATTCCTTATGGTCCATATTTTCAGACCAGATCCTCTGGTCATTGGCCTTCAAAATGCTCAT
GGTGCCATGGTTTTGGAGAAGGCCAAAGAGATACTTATTTTTGTGTTTCCCTCTGGCAAACTGTGGTGAGCTCTATTTTCACTCTTAGATAATATGCTCC
CCTCTGGTTAACTGATATTTTGGGTGGCCCATTCCAGTGACCCTGGTATATAAGTTTTGGGTGTGTATGAGGCTGATTGTCTTTTGGATATTCCTTATGG
TTCATATTTTTCAGAACAGTTCCTCTGGTTGGTGGCCTTCAAAACGCTCATAGTGCCATGGTTTTGGAAAAGGCCAAAGAGGCGCTTATTTTTGTATTTC
CCTCTGGCAGATAGTTGGATAATATGCTCCTCTCTGGTTGACTGATATTTTGGGTGGCCCATTCCACTGACCCTGGTATATTCAAAATGCTCATAGTGCC
ATGGTCTTGGGAAAGGCCAAAGAGGCGCTTATCTTTGTATTTAACTGCTGGTGCTAAGAGCGTCACGTGTCGATTCCCACTGTTTGTCAGTTGTAATTTA
ATGAAGTGATATTTTGGGTGGCCCATTCCACTGGGTGTGTATGAGGATGAATGTCTTTTGTATTTTTGGATTTCCCTCTGGCAAACTGTGGTGAGCTCTA
TTTTCACTCTTGGATAATTTGCTTCTCTCTGGTTGACTGATATTTTGGGTGGCCCATTCCACTGACCCTAGTATATAAGTTTCCACTGGGTGTGTATGAG
GCTGATTGTCTTTTGGATATTTCTGATGGTGCATATTTTTGACCATTTCCTCTGGTCAGTGGCCTTCAAAATGCTCATAGTGCCATCGTCTTGGGAAACG
CCAAAGAGACACTTATTTTTGTATTTCCCTCTGGTCGGATTATTGGATAATTTGCTCCTCTCTGGTTGACTGATATTTTGAGTGGCCCATTCCACTGACC
CCGGTATATATGTTTTGGGTGTGTATGAAGCTGATTGTCTTTTGGATATTTCTCTGGTCATTGGCCTTCAAAATGCTCATGGTGCCATGGTTTTGGAGAA
GGCCAAAGAGATACTTATTTTTGTATTTCCCTCTGGTCGGATTATTGGATAATATGCTCCTCTCTGGTTGACTGATATTATGGGTGGCCCGTTCTACTGA
CCCTGGTATATATGTTTTGGCTGTGTATGAGGCTGATTGTCTTTTGGATATTTCTTATGGTCCATATTTTCAGACCAGATCCTCTGGTCAGTGGCCTTCA
AAAAGCTCATGGTGCCATGGTTTTGGAGAAGGCCAAAGAGACGCTTATTTTTGTATTTCCCTCTGGCAGATAGCTGGATAATATGCTCCTCTCTGGTTGA
CTGATATTTTGGGTGGCCCATTCTACTGACCCTGGTATATTCAAAATGCTCATAGTGCCATGGTCTTGGGAAACGCCAACAAGACGTTTATTTTTGTATT
TAACTGCTGGTGCTAAGAGCGTCACGTGTCGATGCCCAGTGTTTGTTGGTTGTAACTTAATGAAGTGTTTGGAGGGCGCGGTTAACCCTACGCCTCATCT
GCTTCCGTAACACATTAATAAGCAGATGCTTAATTTGCTCAGAGATGTTGGGGACGCAACTTTTTGATTTGAGAGGGTCAAGATCCACTTGCCCCGATGC
TTCTAGATAAAGGTTTACGGATGTCCACACAGACATATATACGCATCAACCTGGCCAGGGAAAGACCCCGACCTATAGACCTATTTAACATTAACATTAA
ATGGGCGACTACCAATCGTTTTGAAGGAGACCTATTGTGTGAAAATACAAAAATGTCCCGGTGTATTACACTCCTCTATAGAAGGAACGTGCGGAGAAAA
GTAGTATTTCAGTATTTTCAGTATTTCAGGTTGATTATTTAATATTTTCCCCCAAAACCCGACTACCTCGGAGTATTTTCTCAAAACATTTGTATAATTT
TTTTGAAAATTTTTGAGATTTACAAAAAGCACCAGGTTTAAGCTGCCTGCGGAGGCTTTAGATATTCAATTTTTGAGAGTTTTATTGTAAAGAAAAACAC
GAAGAAATAGAATAGTCAGTGGCAGCCTGTCCTTGACTCAAGGGGAAGTTAAAAGTGTTATTTTTAGGGATGCACCGACCCCCACTTTTTTGGATTCGGC
CGAACCTACCCAGAAGGGTTTGGCCGAATCCCGAACCAAATCCGAATCCCAATTAGCATATGCTGATTAGGACTGGAAGGGGTTAAAAAAAAAAAAAAAA
AAAAAAAA
5' EST: CX844310 [+]tatttttgcagggagcatgttgggacggctgcttctccttgtgtgcctgttggtgccgagtgtgaggccagccgctcacaccctgcattacgctttcacc
ctcgtctccaattcggccggtcagtcctacttcgttgtcgcgtttgtggacgacgcccagatagggcggtacagcagtgacacgcagaaggtggagcctc
tgctggactggatgaaggagcgccttgagccgcagcactgggaaaccatgacttcctggggcaagcattaccagaactgtcacaccaaggatatgggctt
ctttattgatcgctttaacaatacatacggggacagaggcccgttcatctaccaggtgaactttgcctgcgaggtgcacgaggacggcggcgtcagcgga
cacgaggcctttgccttcaacggcaacgagttcatgttcttcgataagggcaacatgcggttcgtcccggtgagacgcgaagccgaggtcatagcccagg
tgtggaacgggcagcagttcagcgccatcaagcacaagaaccacatggaacaggactgcgtccagtggatggcgctctatctgagatacgggaaaggccg
actggagaagaaagttcagcccacggtgaaggttttcagtcgggagtcggacggcgcgactaagcttcactgctgggtgtatgggttctatccccgagac
gtgnatgtgaggtgngtgaggaacgggaccgaggaggactc
3' EST: CX844309 [+]aaccccttccagtcctaatcagcatatgctaattgggattcggatttggttcgggattcggccaaacccttctgggtaggttcggccgaatccaaaaaag
tgggggtcggtgcatccctaaaaataacacttttaacttccccttgagtcaaggacaggctgccactgactattctatttcttcgtgtttttctttacaa
taaaactctcaaaaattgaatatctaaagcctccgcaggcagcttaaacctggtgctttttgtaaatctcaaaaattttcaaaaaaattatacaaatgtt
ttgagaaaatactccgaggtagtcgggttttgggggaaaatattaaataatcaacctgaaatactgaaaatactgaaatactacttttctccgcacgttc
cttctatagaggagtgtaatacaccgggacatttttgtattttcacacaataggtctccttcaaaacgattggtagtcgcccatttaatgttaatgttaa
ataggtctataggtcggggtctttccctggccaggttgatgcgtatatatgtctgtgtggacatccgtaaacctttatctagaagcatcggggcaagtgg
atcttgaccctctcaaatcaaaaagttgcgtccccaacatctctgagcaaattaagcatctgcttattaatgtgttacgga
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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