XB-CLONE-3634694
Clone Name: IMAGE:7793344
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Gene:
abca5
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC168134
[+]
taatggcttcagaaataaaagacgttggactttggaagcaaacaaaaacactgctgtacaagaattatctcattaaatgcaggacaaagagggacagtat
acaggaaatcctttatcccatcatctggtggttaatatcgctgctgtgggccagcatggtggaacagagcaagcattatgaagcaatgcccaatactttg
cttggggggctagatggacccagttctcggcatctaatcattggatacaccccagagtccaacataacacagcatataatggcaatgacagcatctgaat
gttacctcacagatataacattcaagccatatctggatgaagagcatatgaaaacagcgagtagctcatttgaagagcattttgttggagtggtatttga
caacgccatgtcctacaagctcagattttcagtgtactctgttcccgattccacactttacatgactccaagagaagattgccatctgtggaattgtgaa
gcctctgagtacttttattcgacattcacatatttgcaagcgtgcattgattcttctatgatcaagatgaaaaccaattattctgcctgggaggaactga
aatcgactcgggcagtgatcatgggggagcaggaagtgattgtagttgatacattctatcatgcactcatgtctgtgtttttggtgatggccttctcacc
acttggatactccgttgcattttatgttgtgtttgaaaaggaaaagaaggttaaagagttcatgaagctaatgggactccacgacactgctttttggtta
ccttgggtcctcctttacacgggcttcattttggttatatctctggtgatggcagttgttgcaactaccttcttcccttttagcaaaagcaactgctttt
taatttttctgctatatgctctatatggaatatctctggttttatttgctctcatgctggctccgctgttcaagaactctaagcgagcaggtgccatagt
gttcctttcaaccctggccttgggagcagtgggcattttcattgtactcaaagaagactttccaaaatcatttgtatggttcttcagccctttttgccag
tgcacattcatgattggtatagcccaggtcttgcacctagaagactttcagaggggagcccagttcacacacctaaaggatggtccatatcctcttgtaa
taacatttatttttctagtcgtggacagtgtcatgtacctgcttctggctacttatcttgatcaggttctaccaggtgaatatggccttcgacagtctcc
atttttcttccttaaaccttcttactggtccaaaaggaaaaagcgatatggggagctgaatgaaagctattttgacagagctgtagacatgagtgaggtg
atagaaccagtgtctgcagaacttcatgggaaagaagctatcaggatttgctgcatttgcaagtctttcaggaagaacaacaagccaagaaatgccctgc
aaggtttgacctttgatatatatgaaggtcaaataacagcactggtcggccacagtggcacagggaagacaacactcatgaatattttatgtgggctttg
cccgccaactgaaggttttgccaccgtttatggccacagagtgacagacatagacgagattcaagaagccagcaagatgactggaatttgccagcaaact
gatattttttttgatgttctcacggtggaagagaaccttcacatttttgcctctctgaggggaatagatgagaagaccaaggagcaagagataaataaga
tcttgttcgatttggatatgcaggccctaaaacacaaccatgccagaactctcagcattggccagaagagaaaactatctgtggccattgctgttctggg
aaaccccaaggttctacttctggatgaacccactgcaggcatggactcatgctctcggcacacagtgtgggacctgctgaagaaacggaagggaaaacat
gttactgtattcagcactcactgcatggaagaggcagatattcttgcagatcgtaaagcagtgatttctcaaggatcactcaaatgcattggttcctctc
tgtttctgaagagcaaatggggtgtcggctaccgtttaagcatggatatcaaaaaaccctgtgatgtggatgccctgtcttcactcattacacagcacat
ttctggagcaagtttaatgcagcagagtgaaaactcattactctattcattgcccctaaaggatgttagcaaattcccaggtttattttctgccctggac
agtggatcagacttgggaataatcacatatggagtgtcagccaccactttggaagatgtcttctttaagctggagacagaggcagaaattgatcaaacag
atgggatcttcaatcaaaggaaccttgaagatgaaggcaaatggaagtccatggaagacatagagcagggattactggaactgtcattagaatcatcacc
ctgttcagtgaccggttctgctctatggaagcagcaggttgcagcagtagccaagttacatttccgaaatttgcatcgggagagtaaatctttccgatgt
gtgtgcttgtgcctgttattcttcctagtgccccagctgacactgtatttcttaggcctatcctaccaccagtctctagctcctatcagactctctgcag
acatgtacttttcacatccgaagcaaaaaagccacaagtttctcacaagtcttctgctgcagaactctacaggtacaaaccttgatgagctccttggcaa
cttgaacagtcagaagataaaagttgatttgatcaacggaagtgactacatgtcagcatctccccacaatgcagctctgaatgtgttcctttctggaaag
cattatacatatgaagccattttcaattcctcaatggtgcattccctgcctgttctcatcaacacaatcagtaatagtctactgaggcaacttggtgtga
atgagagcattgaagtctggaatagccccttttaccaggactttttacatacatcctatggattagatttttattttctcatcgcctatctgggaataat
gacaggcatgctgccatatattgctatggaaaatgcatataaccataaggtaaaagcttattctcagctgaagatggctggcctatacccatcagcttat
tgggtaggacaagctgtagtggacattcctctcttttttctgatgcttcttttcatggtcggaagcatgcttgcttttaaatctggaattgaccttcatg
ctggaacagtgctggcaatgattttctgcctaattggctatgtccctgcagttgtgctcctgacgtatgtggtttcctttacctacaaacttattaatga
caccaggcagtggtggtccttaatctttgcagtgacagcttccatttccatcattattatcgaggcagcaatcttcttcgcaagcagtgttacagttaca
aggcttcatgtgttcttctccatatttttccctgtctatccacttctaggctgccttacctgctttataaagatgtcaaggaacttggctcacagtgatg
taaagggccttactcagcttggaaggctcttggtggcagtgtttgctccttacgtgcattttctgatcttcttcttaatcctgcggtatctggaaatgaa
atatggtgggcgatccataaggaaagatccagtttttaggagccaaactaaaaaaacgaagccctggaagtttgctgaagtgcctgaagatgaagatgaa
gacgtaaaggtggaaagagccagggtgggtgaatacatggccccagactgtaatgagaagccaatggtcttagttagtggcttgcacaaagaacaggatc
aaactggtaaaacgattcttgggaaggcaatgagaaaactggtagtgaataacgtatccttttgtgtaaggaaaggagaaacagtggggctggtaggacc
aaacggagctggaaaaagtaccctacttaacatgatggtgggacagagtgagctgaatgctggccagatattgatgggagatccagctgcaggcgagcca
ggcctcagcccaccaaggtttctgggatattccccacaaacaaactatttttggccagaaataaagcttcaggagcaccttgagacctatggagccatca
aaggcatgggcagcaacgttctgaaagaagtaacaaggagaatcgttgaaaccttggacctgaaggatcatctacaggaacctgctaagaagctctcagt
aggaaaccagagaaagctgagctttgcactgagcatgctgggaaatcctgatattgtgcttttagaagaaccctccacaggcatggatccaaagaacaaa
cagattatgtggaaggtgattagaactacattaaaaggcaaagaacaggcagctgtcattacaacacattccatggaagaggctgaagccatctgtgaca
gagtcgccattatggtatctggccagttaagatacattggctccgtccagcatctgaagagcaagttcggacgatatttctcccttgaattaaaacttga
tacaagagccaggagtcagaatgtggaatttcttcacaaggagattctgcaaatattcccaaatgcaagtcaccaggagagcttttcctctctgatgtct
tacaaagttcctaaggaggatgtggagtccctctcccagacgttctctaaattggaacaagttaaacaaatgtataatattgaagaatacatcttctctc
aggcaactctagaacaggtattcattgaactagcaaaagaacaagaggaagaagataacattgccacaatgaacagcactttgtggtgggagagaaggca
ggaggatagagttatcttctgaccatcacgcacacgtatagagctatctgtgaatgtgagctaatggaaagtgtatgctgatatccctttccctgctaga
agggtcaggaatgcctttcacagcaataagttgctgactctccttggcagctgaaggataaagacttcttacgccggaaaagtgatggagttgaggttgg
ttgtagacattttttgtgggctttaatgcagtccttctgcacttcggacctaatgcttaaacgacaatgctgcctcaatagaggtgggggtgacggaaga
aacgttccttaagaagcaatacccaaaccttttccctgagccttggagcaggatcgtacttcattagagcatagctaacaggtcgaccacatgattgtct
cgtgcttttcacaaatctaaaaaagggcactggaaacagaaaatttctctcacttattctcctttgtgctgttggtaatatttctggtgaatggagctac
cgatatacaagtgaccttttattttcagtttaaagtaaatttcccaatagctttataagtccgaggcctataaccacaagcagtgcagcacgacataatt
acaatgtggcacagttaacaccttttcatgatatctaatgtacaggagacaaaagggaacagctgtatccatgtttaatgtttttattgttcaatgtcac
cactgttattgtttcttttctgttggttatgaatgaaatttcaagtatttaaaagtaaaacatagtattgattgccggaagataaaatctatttataagt
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
5' EST: CX847037
[+]taatggcttcagaaataaaagacgttggactttggaagcaaacaaaaacactgctgtacaagaattatctcattaaatgcaggacaaagagggacagtat
acaggaaatcctttatcccatcatctggtggttaatatcgctgctgtgggccagcatggtggaacagagcaagcattatgaagcaatgcccaatactttg
cttggggggctagatggacccagttctcggcatctaatcattggatacaccccagagtccaacataacacagcatataatggcaatgacagcatctgaat
gttacctcacagatataacattcaagccatatctggatgaagagcatatgaaaacagcgagtagctcatttgaagagcattttgttggagtggtatttga
caacgccatgtcctacaagctcagattttcagtgtactctgttcccgattccacactttacatgactccaagagaagattgccatctgtggaattgtgaa
gcctctgagtacttttattcgacattcacatatttgcaagcgtgcattgattcttctatgatcaagatgaaaaccaattattctgcctgggaggaactga
aatcgactcgggcagtgatcatgggggagcaggaagtgattgtagttgatacattctatcatgcactcatgtctgtgtttttggtgatggccttctcacc
acttggatactccgttgcattttatgttgtgtttgaaaaggaaaagaaggttaaagagttcatgaagctaatgggactccacgacactgctttttggtta
ccttgggtc
3' EST: CX847036
[+]actttaaaaacctggaaatttcctcccaaccccaaaaaaaaaaaacaaaaacgggggggcctttgaacaaaaaaaactttaaacggggaaccgggggtcc
ccttttgcccccgggaaataaaaaacccggaaagggggtaaacgggcccccattgaaattatgccgggcccccccgctgggggtaaaagcccccggactt
aaaaagctttggggaaatttcctttaaacggaaaaaaaagggccccttgtaaacgggggcccccctcccccaaaaattttcccccccccccaagggaaaa
aaggggaaaaaaattttcggttcccggggcccttttttaaatttggaaaaagcccaaaaaaacctgggggccccccggtaacctatccccaaaaaaaaaa
aaacccccccccaaggcccaggaaaaaggttggggttttccttttaaagaaaagtttctcccgccccccccccccctttgggggcggctttgggttttaa
actttagccccaaagggcaaaaggcctcctttaaacccccaaaaaaaggtttaaaaaaaacccaaatcc
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41414.jpg) |
Usage:
Suppliers: