XB-CLONE-3594292
Clone Name: IMAGE:7794147
|
Gene:
trappc8
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC122989 [+]
GTCACGTGACCGCCCCGCACCGGCTGATGGGACCGGGCGGAGTTAGTCAGGGAGGAAGAAGAAGCAGCACTGAGTGAGCAGCTCTTAGCACAGGACACAG
AAGCTCATACATTTTCCTGTATATTCCGTACAGCTCTTATGCTTGTCATGCAGCTTTGTGCGTCTGTTCTGCCGTGATCTGGAGCCGCAGTGCGTGTTGG
TTAGCGGGCTGTGACAGGAAGAAGGGAACCTGTGCCGGTACTTGGGCCTGGGATGGCGCAGTGTCTGCTCTCCGTACATGAGTTTCTGCAGGATTCCTTC
GTACCTCAGGTGGCCGCGCTTTGCAGCGAGGAGGCGGAAAACTTGGCCCGGAAGAACCAACTCTCTTTCTGCGAACTGGTGCGACCTTTCTGCAGGCTGA
GCTCGGAGGTTCATATGAGAGACCCCAGCAACCAGCTTCATGTTATTAAAAACCTGAAGATTGCAGTCAACAACATTGTTACTCAATCACCACAGCAAGC
AGCAATCAGGAAAATTTTAAACGATGTTGTCTCAGCTAGCCAGCCTGCAGAGGGTTTAGCACCAAATGTCATTACTGCTGGAGACTATGACCTGAACATA
AGTGATCGTTCTCTTAAAGCTAGTGTTCCTTGGTACAATAATTGGAAAGACACATTGATGGAGCTCAGCATGTCCAAGTTTTATTCAGCAACTACAGCTT
GGTTTGAGTCTTACCGGGAAAGTTTTTTTCAGTGCATGCCAGCTTCTGACCATGAGTTCTTAAGCCACTACTTGGCCTGCATGTTGGTAGTTTCCTCACA
TGAACCCGAGCCTTTGGAACAGTTCCTTAAGTTGTCACAAGAGCAACACCGGATTCAGCACAGCAATGATTATTCTTATCCTAAATGGTTTACACCCAAC
ACGCTGAAATATTACGTGCTGATGCATGATGTCAGCAGTGGGGACGAACAGACGGCTGACTCCCTTTATGAGGAAATGATACAAAGATATGGATCTCAGG
GATGTTATTTGTTAAAGATAAACTCTCGAACATCCAGCAGAGGAGCAGATGAACAGATTCCTGATCCATGGAGCCAGTATCTCCAGAAGAATTGTATTCA
GAATCAGGATCCTAATGAAGCTGGTTCGTATAGCAGTGTACCAAATAAGAATGCAGAGCATGTGATCTCTGTGGATGGATTGGAGAACTCTGTGAAAGAT
GTTTTATCGAATAACTTTGCAGTTCACCCACTTCAGCTTGATCAGATAAATGACTACACTGGAAGTTTGGATGGGCTTGATAAAACCAGAGCTCTTGGAT
CTGTGAATGATGCAAAGAAATCAGGTGCTGGCACCCCTCATGGTACATGTTTGACTCTTACTGACCATGATCGTATTAGGCAGTTTATACAAGAGTTCAC
ATTTCGAGGACTATTGCCCCATGTAGAGAAGACAATTCGACAACTGAATGACCAGCTAATATCCAGAAAAGGACTGAGCCGGTCATTATTGTCTGCGACC
AAAAAGTGGTTCAGTGGTAGCAAGGTACCAGAGAAAAGTATTAATGAATTGAAGAACACCTCTGGACTGCTGTATCCACCAGAGGCACCTGAGCTCCAGA
TTAGGAAAATGGCAGACTTGTGTTTCTTAGTGCAACATTATGATCTGGCATACAGCTGCTACCATACTGCAAAGAAAGACTTCTTAAGTGACCAAGCAAT
GCTTTATGCAGCAGGGGCACTGGAAATGGCGGCAGTTTCTGCTTTTCTTCAGCCTGGTGCTCCCAGACCTTATCCTGCTCACTACATGGATACTGCTATC
CAAACCTACAGAGATATTTGCAAAAATATGATTTTGGCAGAAAGGTGTGTGCTGTTGAGTGCTGAAATTTTAAAAAGTCAAGGCAAATATTCAGAAGCAG
CTGCCCTTTTGATAAGACTGACAAGTGAGGATTCAGATCTACGAAGTGCGCTTCTTTTAGAACAGGCTGCCCATTGTTTTATTAACATGAAAAGCCCTAT
GGTGAGGAAGTTTGCATTCCACATGATACTAGCTGGCCATCGATTTAGTAAAGCAGGACAGAAAAAGCACGCATTGCGCTGTTACTGTCAGGCAATGCAG
GTGTACAAAGGAAAGGGATGGTCCCTAGCAGAGGATCATATTAATTTTACTATTGGTCGTCAATCGTTCACGCTTCGTCAGCTTGAAAATGCGGTCTCTG
CCTTTAGGCATATTCTTATCAATGATAGCAAGCAGCCTGCATCACAGCAAGGTGCATTTCTTCGAGAGTATCTGTTTGTTTATAAGAATGTATGTCAGCA
GTCACCAGAGAGCCCTTTACCACAGCTTCCATTACCATACATTAATAGTTCATCCACTCGAGTCTTTTTTGGGCATGACCGGCGGCCTGCTGAAGGGGAA
AAGCAAGCTGCGACACATGTGAGTCTTGATCAAGAATATGATGCAGAATCATCTCAACAATGGAAGGAGCTGGAGGAGCAAGTTGTAGCTGTAGTAAATA
AAGGAGTTCTACCTTTGAATTTTCAACCAACACAATATTGTTTAAGCAGCAATTCAGATAACTCCAAGTTTCCTCTCTCAGTAGTCCAAGAGCCAATAAC
AGTAGAGGTGTCTTTCAAGAATCCATTGAAGGTTCCACTTCTGTTGACAGATTTGTCTTTGCTATGGAAATTTCAACCAAAAGACTTTAGTGAAAAGCAT
AATGGAGAAGTGAAAGAAGCAATAAGCAATGAAAGAGATTTGGCCCCAAAGGGTATATGTAGCAATGATGTTATTGGAACAGAAGAAATAAGTGAATTTT
TTATTAACAGTGAAGAAACAAAAATAGCAAGATTAAAATTATTTCCGAACCAGACTGGAGAGCTGCATATTCTTGGCATTGTCTACAATCTTAGCACAGT
TCAGAGCACCTCTGGTGTGGATGGATTAGCAACTGCAAACAGTCTGTCAGCAGTTCCAGGCAAGTTTATTTCAAATGGAATGTCAGTCAGGGGGCGTCAG
GAATTAGAAATACAAGGTCCTCGATTGAATGGTACAAAAGAGGAAAAAACGTCTATTCAGTATGGACCAGATCGTCGCCTGGATCCGATAATTACACCAC
AAATGCCTTTGCTAGAGGTGTTCTTCATAAACTTCCCCACTGGACTTCTCTGTGGAGAAATCAGGAAAGCACATGTTGAGTTTGTGAATGTGAGCAAGTG
TCCCCTCACTGGACTAAGGGTTGTTTCCAAAAGACCAGAGTTTTTCACCTTTGGCAGCAATACAGAAGCACTGACGCCGCTAAGTCCAGCAGCCTCAATG
AACTGCAGTGCTTATAAGACTGTTGTCACCGATTCTACCTCCCGGTGTTCAGTGCTTACATCTTCTGTTATCTCATCAGATTTTGGAGCTGGTGGTGGAA
ACCAGACCGAGGTTATTGATATTCCTCTCACAGACTCTGTTCTTGCTCCTGGAGCATCTGTCCAGCTTCCACTGTGGTTACGAGGACCTGACGAGGAAGG
AGTTCATGAAATAAACTTTTTGTTTTACTATGAAAGTACAGAAAAACATTCGAGAATGCGACATCGGGTTCTGCGCCATACTGCAGTCATATGCACCAGT
AAGTCCCTGAATGTTCGAGCATCAGTTTTCAGAAGCAATGCACTTGAGGATGAAGAGAGTGAAGGTGGCAATATGGTAGTATTCATGGATGTGGAAAATA
TGAATACTAGTGAAGCAGGTGTAAAAGAATTTCATGTAGTGCAAGTATCAAGTAGCAGTAAGACCTGGAAGCTCCAGAAGTCAGTCAACCCTACAGATGA
CAAGGATACTAAATTAACCAGCAGAGAGAGGGCCAAAATGTGTTTCAAAGCTGTAAGATGCAAATCATCTTTGGGTTCTGCCCCACAGACGGAAAGATAT
ACATTTGGAGACATTGTTTTTGGAGGTGAACAGATCATTAGTTCAACTACTCCATGTGCAGATTTTTTTTTCCAAAGCTGCTTAAGGCAACAGCTTGATA
AAAATCCGACTGCAAACACAGATGGGTATGGAAAGTCAACGGCCGACAAGACTGTCAGACTGATACAGAAGTGCAGTGAAGTTGACCTGAACTTGATCAT
TCTGTGGAAGGCCTATGTCATTGAAGATAATAAGCAGCTTATCTTGGAAGGCCAGCACCACGTGTCCCTGAGTACTGTTGGGGCAGAAGCTTTGTCTTTT
CCTCAGAAGCAGGAACAGCCCGAAATGGTTCTCTTAAAATTCACTCGGTCTGAAAATAATGCTGCACTTGTCACACCATCACCAGAACAGCTTTCCAATC
TAATAAAAACAAGTCTTCACTACCCAGAATCTTTCAATCATCCATTCCAACAGAAAAGCCTTTGTTTAGTTCCAGTGACACTGGTGCTTTCCAACAGTTC
GCAGGCTGAAGTGGATGTTATTGTTGACCTAAGGCATAAGGCCAGAAGCCCTGAAGCTCTAGAAACCCACGGTTCCTTTACCTGGCTGGGGCAAACAGAA
TATAAACTGCAGCTGAGGAGCCACGAAGTCTTCACATTGCAGCTCAAGGCTTGCTTTTTGCACACGGGAATTTACAACCTTGGGACTCCTCGGGTGTTTG
CTAAGCTGGCCAATCAACTCACGCTGTTTGAAGCCAATCAGCAGAGTTCAATGCCAGCTCTTATTGTTATTAACAGTGTCTGACGGCTTTGCACCCCAAG
CACAATGGGAATGAATCGGTCAGTTTAATGTCAGATATACTGGGTTTTCTTGGAATAAAGGGATGAAAGTCACACCTCCTTTAATATCCGACATGCAGGA
GATTCCATAGGAACCAAAAGTAAATGTTCAGTTGAATAGTTACAGTTTCTATATGCAAGATATCTGGAACTGACAAATCAGCTGCCCATTTCATTCATCT
GTACAGAGCATTACTTTCAGCCTTGCCAAGGAAATAGGTATTTCCTGTTTAGCGCCGGATGCATTCCTTACAGATGTAAATACAGAAAGAGAACTAGAAA
TACAACCGCTCATTATGTTCTATACGTTCTGCTGTGTTCCTTTTATTTGCCCCCTTTGGTTTTGTCAGTTCTTCTTTTCCCTTACTGGTTTGTTTCAGAG
TACTGAAATTTTTCGCTCGCTGCTCCGTTTGATTAGCCAATCAGCAAACTCCCATTTCTAAGTGATATTCTTAAGCCCATTTGTTAACAACGAGATTCAT
CTCAATACTCAGTGCACTATTTCACGACTTTGTTATTATTTAACTCTAACGATTGAGTTGATCACCTCAATATAATATGCTTTTCAATAAACAATGTATT
ATATTTATAACAAATGTATTGTAAATAGAATAAAACATACGCCATATTTGCTGTTCAAAGACTTTTCTTGCATATAATAGACAGTAATATATACTATTTG
TTGCTTAATCCTGTTAACAATATGAGAAATGTATATAAGACATTAAAAGTTTTAACAAGTCTGTGAGTAAAAAAAAAAAAAAAAAA
5' EST: CX906945 [+]tcacgtgaccgccccgcaccggctgatgggaccgggcggagttagtcagggaggaagaagaagcagcactgagtgagcagctcttagcacaggacacaga
agctcatacattttcctgtatattccgtacagctcttatgcttgtcatgcagctttgtgcgtctgttctgccgtgatctggagccgcagtgcgtgttggt
tagcgggctgtgacaggaagaagggaacctgtgccggtacttgggcctgggatggcgcagtgtctgctctccgtacatgagtttctgcaggattccttcg
tacctcaggtggccgcgctttgcagcgaggaggcggaaaacttggcccggaagaaccaactctctttctgcgaactggtgcgacctttctgcaggctgag
ctcggaggttcatatgagagaccccagcaaccagcttcatgttattaaaaacctgaagattgcagtcaacaacattgttactcaatcaccacagcaagca
gcaatcaggaaaattttaaacgatgttgtctcagctagccagcctgcagagggtttagcaccaaatgtcattactgctggagactatgacctgaacataa
gtgatcgttctcttaaagctagtgttccttggtacaataattggaaagacacattgatggagctcagcatgtccaagttttattcagcaactacagcttg
gtttgagtcttaccgggaaagtttttttcagtgcatgccagcttctgaccatgagttcttaagccactacttggcctgcatgttggtagtttcctcacat
gaacc
3' EST: CX906944 [+]actcacagacttgttaaaacttttaatgtcttatatacatttctcatattgttaacaggattaagcaacaaatagtatatattactgtctattatatgca
agaaaagtctttgaacagcaaatatggcgtatgttttattctatttacaatacatttgttataaatataatacattgtttattgaaaagcatattatatt
gaggtgatcaactcaatcgttagagttaaataataacaaagtcgtgaaatagtgcactgagtattgagatgaatctcgttgttaacaaatgggcttaaga
atatcacttagaaatgggagtttgctgattggctaatcaaacggagcagcgagcgaaaaatttcagtactctgaaacaaaccagtaagggaaaagaagaa
ctgacaaaaccaaagggggcaaataaaaggaacacagcagaacgtatagaacataatgagcggttgtatttctagttctctttctgtatttacatctgta
aggaatgcatccggcgctaaacaggaaatacctatttccttggcaaggctgaaagtaatgctctgtacagatgaatgaaatgggcagctgatttgtcagt
tccagatatcttgcatatagaaactgtaactattcaactgaacatttacttttggttcctatggaatctcctgcatgtcggatattaaaggaggtgtgac
tttcatccctttattccaagaaaacccagtatatctgacattaaactgaccgat
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 0.5-1.5 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe4 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: