XB-CLONE-3592360
Clone Name: IMAGE:7687529
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Gene:
nup155
,
cd274l
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Species: Xenopus tropicalis
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|
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Sequence:
Full length sequence: BC168128
[+]
tgaagatagaggatgaggagcccccaactgttacactgggatctgatgtgatcctcccctgtacattcagtgtgggtcagcctgtcagtctgcagtacct
tgcaatactttggaccttccagaacaaaatgctgttcagacttgataacaaggggaagcagctcagcccaagggtgacatttagtgatgcagatgccatg
aaagggattgcttctgtgcaacttcacaacgtctcagtcatggatgccggcgtctacatgtgtaaaataatctacggtcctgaaaagaaagaaaaggata
taacactgaaagttcagtctcttcctacagttgaattgttagagagagtaaccaatgaacagagtatgatcgtgtgctcagtatcccggttctacccaaa
gaacatcaccgtgaccataatacaggaaggaaaggacgtgaccagttctacattgtccagttaccaacagaatcccgatggcacattcaatttgagcaga
accctgacattagaggacgcaatgaaacaaatatccatgtcttgcagagtccaacatgaatctcttgctgagcccatcaagaaagatttactgctgctac
atggaggtgctgatgaatccaataacgctgttgtgtttggagttgttggtgcctgcgcggtgcttcttgtcattgtgattggtatagtttactgcaaata
cagcaggaaaaaaggtttggagaagtttacgatgggtgacattcaggggcctccggtttggatagatggggaaaagctcaccctttactgtacagcatcc
agttgtccccaggatgccaaagtctcttggatgctaaaggcacaagatggcacaatgagtgaattctcagaggctggtactggggaggcagaggaggaac
agcctcttatctccagagaatatattgtatctaaggaaaagaccaccaggccacaaaagaacggcctttgtgattattccagcactttctgcttcattcc
atccgcatcaaggcaccttggctcctctgtttcctgcaagtttgtgtgcggtgggaaaacccaggagaaggccttccagtttaaggctattcaagccaaa
cccaggtttattgagccaataagtatcagcctttgtgactctgggaatgtccagctattagccaccctggagaggttctaccctaaggagggaatcaagg
tcacttggagatgtaacaaggaaaagccaccagagacaaatgcaccaatggatgaattgattacacaccctgataatacttttactgttagaagcaaata
tgaaattcctggggatcagttcaaggatccagactttaaagtgtgcgtctcatggaaccatgattctatggagaaagccgagtccagggaagtgagcgtg
aaagatttcccatggtgcccaactatggacgacattcccttacagagtgagagagagaacaataaattacgactgagctgtaatatctccaattacttcc
ctgatgctctcaccgtcagttggtttgggaagaagaaagggagtcaggaactgtttcctgtaactggaagtgacatttatgtaatacaaaagccccagtc
tgaaaggggcacaaattacacatataagtgcaaagcgtgtttggttctgccactgccagaaagcacggagcaggaaatggaatatatctgtagggtgggg
cacccaagcctgaaggaaccaatacaagggggcactgggcctgtacagagatatgatttgggagagaagcagagctttattgtgcatgacattcaggggc
cacagaggtggcaagaaggagagaaggtcactctgtatggtactgccctgtactgtaagaaggatgttcaggtgacctggatagtgaccgagagggatgg
aaccataagggaaatcccagatgttactaaggatacagaggagaagcttggggccaatgactatgtggcttgtagggagaggagtgacgattcagaccgc
gagggactcatagacattaccacatccctgagcttcactgcttcagtctcgcggcacaaatccatgagcctcaattgcaagtttgtctgtgatgggaaat
cctctgaaaaactcttccaatataaagatctctgtgccaagcccaagcacctgaagccaatagaattctctctccttgagaatggggaggtgctgtgttc
cctcagcttgcagcagttttaccctaaaaccatgcagatcagttggggtgctggggtccccccttcctatgacaagatggagtcagctgaggaagtgaca
gactcgggactcacgtatgatcttctcagcaaatgtagaattcctgggcggcttctccgagatcctgactttactgtcagagcttcttggaaacacgagt
tcatgagtgactgggaatccacccaactgtccctcagagacccagataagtgaatagccatcactcagaatcaaatgacctcttatagtccctgagaaaa
aagggttaatgatgtgcttatagaaaataccagcagttccattaagttcggccaataagctgaaagaagagtttatgaaatcaagggatctaggggcacc
aataatgtagttttccatggaaaccagtagtccagaacattcctctgcccaatctctttgctaacaatccggtcacactgatgtgccaagtctctaatat
cttccctgagtctgtgactgtgaagtggttcaggagggagaaggatggagaggacttgttcccagtgtctcacagtgagaagtacaagatcccagaagtt
actctggagaagcaagaagaagataagacatttcagtgccgagcccgtttaaccttcaccccaactgttagcttagagcatggagctgaattcatctgta
gggtggaacatcccagcttggagaaaccagaggagaggagaacgggtcccctcctcatagaagtagaggagcagaagttcattgtgaaggacattcaggg
gccagacaaatggacactgggaagagaagtcactctctatgcaatggctgcttactgccccaaggatataggggtgatatggattataagggagagagat
ggaaaagtgtgggagatctgtgacaccccaacagaaagaggcaacaagcccacagctccaggacccaggagatacgtggtaactagagaaagtactgatc
catcagacaaagagggactcattcatgtgacaagttccatgagatttaccccctctgtatctgcccactctggggtgagtctcatgtgcaggtttgtctg
tgatggaaaaactgaggagagagaatttaagcccagagccctctatgcaaaacccaaactgttggagccaataaagccggaacggtataataacgagaaa
gtgaaattctccctaaaccttgggaaattttatccaaaagacatggaaatcagctggacgtctggggtgggagcttctcagaaaaagaagaaatcaactg
accaactgcaggaaaatcccaaccggacgtttaatatccaaagtacctgcacaatttcccagagatccttccgagatccaacgtttaaagtgtgtgtgag
ctggaaacatgaatccatgggaaatcctgagtccagagaattttctctgcaagatttaggtgacatttggcgcccaatagtggaagcaatccccctccat
cagatagtggtgggccggcaggttgccctgcagtacagaatctctgggtatttccctgatgccctggctgtgagttggtataagaaggagaaggggagag
aagagccggttcctattactgggaaagggaggtacgggatcccagattctgtaaccacggagatgggggatcggactctcacccgtacggcaagtttggc
tttctctccatccctgagtgaggaacatggggcagaatttatctgcagagtggcacatcccattctacaggaacccatagagaagagcagcggcccattg
tctgtctgggcccgaccccagatgccccggccggtgaatataaccctctgttgtgactccggagaagcactcttctctctgaagctcctgagtttttacc
ccaaggagatacagactgagtggcacctcatagcaggaaagtctaaaattaaattacattcagcaccaagtttcacccagaatcctgatctgacctggag
cattgagagtaacagcaaagtttcagggaacaaactgaaagatccaaagtccagagtgtctgtaacctggaaacatgaaaccatggaaggtccagaaaca
cgggaaatatcagtcctagatccagatttcccttgggccccagaattgggggagatactgagccccaggcttgtccctgggaaggaggccaaattgcagt
gtaagatctctgggtgccaccctggtgccctgacagtgagttggtacagaagggaggaaggaaaccaggagtgggcccctgtgagtccaggagagaagta
caagatccccagactcagagaggactataaacatttctcctgcactgccgctttgtccttcaccccttccccactcaccgacaatggggtggaatttatc
tgtatggtgggacatcctactctagagcgcagcgtatggagagggaccggcccactgagagtgctggagtaacaggatgaagctcctacagcagaactgg
gaccgaccaaccctgcaatggaggcagaacccgagcctaatggggaggagctaatggataccacttagataccactaatactcagtaacactatggatac
cacggacaccatgaataccagggataccatggataccacaaacaccatggataccgcagataccacaaacaccatggatattacaaacaccacggaaaac
acagataccatgaacaccatggataccatggataccacgaacaccacggataccacgaacaccatggataccacgcacaccacgcataccatagacacca
tggataccaaaaacaccacagataccatggataccaccaatactcagtaacactatggagaggcactctgggctgtgtatctgggggattcagatttatg
ggagacccccttgctttatcacgtatttggaccataaaagagaaggaatggatactagtgagatataaatgaaggacatagatcagaaggataacagagg
atgtactgtgtaataactacctacactgcactgtatctgttatttttgtacatatattctatgttttaacaggtacaaaggctactgtaacaaccaatcc
cattctcatttcatttttctaattgtattagatcagtaaatgtaactgctgaatggttgctatgggttactagacctggagcaaactccccacttgttat
tacatttctctcccctgtgggtttgtgcagtgtaattgcatcacaaattcatcttcagtttttatattgtctgttttataataaaatctataaatctgtc
tgttccaaaaaaaaaaaaaaaaaaaaaaaaaaa
5' EST: CX908991
[+]cgtgtgtgtttgaacagagttgtgcgctccgtacattcggggttcggttccgctgctgagttggaggcagccatgcccagtgtaacacctggggccccgg
cagcctctgccgccatgcaggaggctttggaaggagcgggaaggatcatagacaggctgctgcaggaggaccgagcctacccggacctgtccgagctgct
caacgtgcccgtgcatacttgtcctacaatatctggtgtatctgaaatggactatcctctgcaaagccctggcctgttgacaattcccagccttcctgag
atcagcgctatccgccgcgttcctcttcctccagaactggtagagcaatttggacatatgcagtgtaactgtatgatgggagtgttcccggaaatcagca
gggcatggctgaccatcgacagtgacatattcatgtggaactatgaggatggcggtgaccttgcctactatgacgggctcagtgaaaccatcctttctgt
ggggctagtaaaacctaaggcaggaatttttcagcctcacatacgctttctgcttgttcttgctactcctgttgatattgtgatcctgggactaagtttt
gccaatttacagccaggtaatcttaatgacagcatttctggtggaatgcagctactcccagacccgctatattccttgccgacagacaacacctatcttt
tatccataacatcaactgacaatgggcgcatattcctctctgggaaggatggttgtctgtatgaagttgaatatcaagctgaagcgggct
3' EST: CX908990
[+]gttttgtaaaattaatttataatctttttttcaaaaccctgtttggcagttggaatatttaaggaagaaaatatgaattataacaaagtctcctcattta
atgtaggaggaaaaatgtcaccgtgtggaaaacagaccagaatgcagtgtggcgatgggtcaggcagtattcgaggaataaaacattcgtattgagagat
ctaaatcaggacacacaaaggtaaatgagtggaaccatgccgaaagcaatggcagccttcatggtatccacaacccatccaagtgtgtgtacagctgtcc
attatgttgaatcatgaatctgactggcttgactagctcagccgctctaatttagcttgcaaagatttgaagttagatacagtattcagcaacgccggag
ccggatccatcgactgcagttccactaggtagcaggatattgcatccaggcagagtgtggtaaaccggcgcctttcataggaaggcactttgcttggctc
ctgtacatacccagagagcaaaagataaatgctttctagcaagtgcaggggcttcttcatcctactccaccagggatcccttgctttaaacaagtgatca
tatacttcaagtaacttgggaacaggcacattgatctcttgcattgtgtacgttacaaagccagcgtcccagctgaagttacacacctgttgttccaggt
atttcaccaaaa
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe3 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI |  |
Usage:
Suppliers: