XB-CLONE-3578142
Clone Name: IMAGE:7695034
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Gene:
pdzd8
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC121328 [+]
GGAGCCGGTTTCCCAGACAGCGGCCAGATGAGCGCCGGGCAGTGAGGGAGGCGATGGTGTACGCGGCGCTGGTGTCCGCCTTGGCGGGCTGTCTCCTGAC
TCTCCTCCTGCAGCTTCTCCTGCTGTTCCGCCACCGCCGCCCCGAACCCCTAGCCCGGCCCCCCCCGCCCCGGCCCGTACAGCCCGACGCCTCCCTGCGG
GACTACCTGAAGGCAGAGCCGGGGGGGCCGGCGGCGGAGAGTTGCCAGTTCCTAAACACCATCTTCCTCTTCCTGTTCCGCGAACTCCGGGACACGGCGC
TGCTCCGCCGCTGGCTCAGCAAGAAGATCCGAGTGGAGCTGGAGGAGCTGCTACAGAGCCGCACGGCGGGCCGCCTGCTGGAGGGCCTGAGCCTGAGGGA
CATCTCCCTGGGGGAGGCGCTGCCGGTCTTCCGCTCCGTCCGGCTCCTCAGCGCCCCCGGGGAGCCCCTGCCCGACGAGCTGCAGTTCGAGATGGAGATG
GAGTACAGCGGGGGCTGCCGCCTGGCCATAGATGTGGAGCTGGTGTTCGGCAAGTCCGCCTCCCTGTCCGTCCGCCTGGGCCGGGTGATTGGCCGCCTGC
GCCTCGTCTTCTCCCGCCTGCCCTTCCCTCACTGGGCCTTCTGCTTCCTGCCCGACCCCACCATCGACTTCCACGTACAGTCCCAGTTCGAGGGTCGCCC
CATGCCCCAACTCACCTCCATCATCGTCACCCAGCTAAAGAAGGTCATCAAGCGAAAGCACACCCTGCCCAACTACAAGATCAGGTACAAACCATTCTTC
CCAATACAAGTGCAGCCGCCCGAGACGGATTTGGAGGAGCGCTCCCTCTTCTTACAGGACATGGGATTAACCGAGGGGCGCTTGAAGGTCTCTGTGACAG
AGTGCAGCAGGCTTCTGATATTTGGTTCCTACGATCAGGAGACCTACATCCACTGCACCCTGGAGCTGAGCGCCAGCCCCTGGAAGGAGAAAACCAGGAC
GTCCATCAAAACGGTGGAGCTGATTAAAGGGAATTCCCCGAGCTTCGGATTAATAATGGTTCAAGCAAGGGACGGAGACACGGGACACGTCTGTGTTGAA
TCGGTGACCCCAAATTCTCCGGCAGCCTCCGTGGATCTGAAGAAAGGAGATCGCCTTATTGCCATAGGAGGCATAAAAGTGACCTCCTCAATTCAAGCTT
CGAAGTTAATCAAGCAAGCCGGTGACAGAACCCTGGTGTTCTACGAGAGGCCCGCTGGTCAGAACCAGTCCGCTGGCAGCTTGCCGGAGAACCTTGGGCA
GCTGGAAGACCCGGCATTCGCTGCCTCCGCCTTTCCCCAAACCTTTGAAGAGGACTCCGTCAGCTTCATTGTGGATCCAGAGAACAAAGAGTTGGATTCG
GAGTTTGAGGACCTCGCCAATGAGGTCAAACCACCCGGAGAGTCCAAAGAGGACTCTGTTTCTGTGACCCAGAGCCCTAAACGCACGGTGGCAACACTTT
ATACCAAGCCCTTAGGGTCCGTATCCCCTATTCTCAACAGGAAGGCGAATTTGCCAAGTCACCAAACACCTTCGAAGACCCAACCCAAAGTGAATAAAAC
TGCCCCGCCAGAAACCCAAGACTCCACACCGCAAAACAGGGCTTCTCCTGCCAACAAGCCTCCAGTGCCGCCACGGCCTCAAGTAAAGCTGACTCTAACT
TCATGTGAGAATCCGAGTGCTCCAGAGACGGGAGAAGCCACTGTAGAAAAGCCAGAAAGACCACCGCCGCCATCGTTAAATGGAGATAAACAGCCGGAAA
AAAGTGCAAAAACCACCGAGACGGTCGATGAAGCACCGGTCCAGAAACCCAGTTCTGTTAAACAGGACGTCGCCAAGGATAAAATATCCGAAAGTTCCTG
CAGCACAAAAGACAGCGTGGACGATCCGCACATCTGGGAGTCGAAGGAGATACTGTACAGGAACAAGCAAGGGCGTTGGACAAGGTCCTCCTGTCTATTC
GATGTGGAAAATTATCACCGGTATCTGAACGTCGCCCTGTGGTGCAGAGACTCCTTCAAAACGGGGAGCCTCTGCTGCGTGGGGCACATCAGTATCCGAC
TGGAAGACATTGCCTTAGAGTGCCTGGCCACCGCCTCGCTGGAGTACCTGACCAGTTTTAAGCTCAACCCCACCGAACCTAGAGCCTCCGTCAGTAGAAC
TGCATTGAGAAACCTGAGCATGCATAAGGGGTTCAACGAAAAATATTGCTACGGGGATGTCACGTTAAACTTCAAATATCTGATGGAGGGCGAGTCCGAG
ACGTCTAGCATGTTGTCAGAAAGAGAGCGGGACGTCGGCTTCCAGGACGACGGTTCCTCGCTGCAGAAGGAGGAGCTTCCCGTCCCCCCGATGATATTTG
CTGAGTCCAAACACAACTTCCAAGACACGCAGTTCCAGAACTCCACCTTGTGCGATTACTGTAAAAGGAAGGTGTGGACCAAGGCCGCTTCCCAGTGTAT
AAACTGCGGCTACGTGTGTCATAAGAAATGCCAGGAGAAGTGCTTGAACGAAAATCCTTACTGCGTTGCTTCTGATAAAAGGGTCGACCCCGAGTCAAAG
TCTTTGGGGAACAGAACTACAGGCATTACCAGGCACATTATAAACACTAGTTCCCGCCTCTTGAACCTACGCCAGGCTCCCAAGCTGCGGCAGCCGGAGC
AAGGTTGCGATTTGGTGGAGCCGTCGCCAAAGCACACGCCGAATACTTCAGACAATGAAAGTAGCGACACGGAGACATGTGGGTCAAGTAGTCCATCAAA
AAGAGCGTCCGGCGGCAGCGGGAAATTGGCTCGCAGAGACGGCGGCCTGGACGATAGCGTCTTCATTGCGGTGAAGGAGATCGGCCGAGACCTTTACAGA
GGCTTGCCGACTGAAGAACGGATACAGAAGCTGGAGTTCATGTTGGATAAACTGCAGAACGAGATCGACCAAGAGCTGGAGCACAATAACTCCCTGGTGA
AGGAAGAGAAAGACGCCACCGAGGCGCGACGGAAAGCCCTCCTATCTGCCGCCTTGTCCAAATCCAGCGAGAGGCTTCAGGCCCTGACGTTGCTCATGAT
TCACTACAGAGCCGGCATCGAGGACATCGAATCCCTGGAAAACTCCTCCCTGGCCCAACCTCGGAAAAACGCTAAATGCGAAGAAGAGGCCGTCGTTGCG
GCGGAGGCAGATAACCACGACGAGGATGAGGATGACGTAGGCCAAGCGGAAAGCGAGACTCTCAGCTGCGTATCTCCAGAGGACAAGCTTCCTACTTCAC
TTGAACCCGAGCAGTAGGGGGCGCTACGTGTTCTCTGGGGCGTTCTAACCACTCATTATTTGCACTTAATAAAGGCATATCGTGTAGGCAAAAAAAAAAA
AAAAAAAAA
5' EST: CX923734 [+]gagccggtttcccagacagcggccagatgagcgccgggcagtgagggaggcgatggtgtacgcggcgctggtgtccgccttggcgggctgtctcctgact
ctcctcctgcagcttctcctgctgttccgccaccgccgccccgaacccctagcccggccccccccgccccggcccgtacagcccgacgcctccctgcggg
actacctgaaggcagagccgggggggccggcggcggagagttgccagttcctaaacaccatcttcctcttcctgttccgcgaactccgggacacggcgct
gctccgccgctggctcagcaagaagatccgagtggagctggaggagctgctacagagccgcacggcgggccgcctgctggagggcctgagcctgagggac
atctccctgggggaggcgctgccggtcttccgctccgtccggctcctcagcgcccccggggagcccctgcccgacgagctgcagttcgagatggagatgg
agtacagcgggggctgccgcctggccatagatgtggagctggtgttcggcaagtccgcctccctgtccgtccgcctgggccgggtgattggccgcctgcg
cctcgtcttctcccgcctgcccttccctcactgggccttctgcttcctgcccgaccccaccatcgacttccacgtacagtcccagttcgagggtcgcccc
atgccccaactcacctccatcatcgtcacccagctaaagaaggtcatcaagcgaaagcacaccctgcccaactacaagatcaggtacaaaccattctttc
caatacaagtgcagccgcc
3' EST: CX923733 [+]gcctacacgatatgcctttattaagtgcaaataatgagtggttagaacgccccagagaacacgtagcgccccctactgctcgggttcaagtgaagtagga
agcttgtcctctggagatacgcagctgagagtctcgctttccgcttggcctacgtcatcctcatcctcgtcgtggttatctgcctccgccgcaacgacgg
cctcttcttcgcatttagcgtttttccgaggttgggccagggaggagttttccagggattcgatgtcctcgatgccggctctgtagtgaatcatgagcaa
cgtcagggcctgaagcctctcgctggatttggacaaggcggcagataggagggctttccgtcgcgcctcggtggcgtctttctcttccttcaccagggag
ttattgtgctccagctcttggtcgatctcgttctgcagtttatccaacatgaactccagcttctgtatccgttcttcagtcggcaagcctctgtaaaggt
ctcggccgatctccttcaccgcaatgaagacgctatcgtccaggccgccgtctctgcgagccaatttcccgctgccgccggacgctctttttgatggact
acttgacccacatgtctccgtgtcgctactttcattgtctgaagtattcggcgtgtgctttggcgacggctccaccaaatcgcaaccttgctccggctgc
cgcagcttgngagcctggcgtaggttcaagaggcgggaactagtgtttataatgtgcctggtaatgcctgtagttctgttccccaaagactttgactcgg
ggtcgacccttttatcagaagcaacgcagtaaggattttcgttcaagcacctctcc
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe3 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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