XB-CLONE-3400525
Clone Name: IMAGE:7643333
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Gene:
npas3
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC123929 [+]
GGAGGAGAGAAGGGAGGGCGGTGTGATGGAACCCAGTGATGGAGGGATGCAGCGCTAGTTAGATCCGCTCTCACCCTCGGGAGGAGGTGGAGAGCTTGGC
CGGGCTCAGGGCTCATGCAAGCGGCTGTGTGAGCGGAGAATGTCGGCTCCCCCCACACTGGGCCCGGGATGCCCGCTGCTTTGACCCACCGGACACAGCG
GGGCCGCTGCCCGGAATATGGCGCCCACCAAGCCCGGCTTCCAGCAGGACCCCTCCCGCAGAGAGCGTTTACAAGCCCTGCGGAAAGAGAAGTCGAGGGA
CGCGGCTCGTTCTCGGCGGGGGAAGGAGAACTTTGAGTTTTACGAGCTGGCCAAACTTCTCCCGCTCCCTGCAGCCATCACCAGTCAACTTGACAAGGCA
TCCATCATCCGGCTGACCATCAGCTACCTGAAGATGAGAGACTTTGCCGGCCAGGGAGACCCGCCCTGGAACCTACGTATAGAAGGTCCTCCACCAAACA
CCTCTGTTAAAGTTATAGGGTCCCAGCGGCGGAGGAGTCCCAGCTCCGTGGCGATGGATATTTTCGAATCTCATATGGGGAGCCACATTCTCCAGTCTCT
GGACGGATTTGTATTTGCACTAAACCAAGAAGGAAAATTTTTGTACATTTCGGAGACTGTGTCCATCTACCTTGGCTTGTCTCAGGTGGAACTGACGGGA
AGCAGTATGTTTGACTATGTGCACCCAGGGGACCACGTGGAGATGGCAGAGCAGCTTGGGATGAAACTTCCCCCTGGTCGAGGGCTTCTTTCCCAGAGTG
CCAATGATGATGGAGCCAGCTCAGCATCCTCATCTTCGCAGTCAGAGACCCCCGAGCCAGTGGAAGCCACTAGCCCCGGGATTCTCCCTCAGGATAACTC
TCTGGAACGCTCCTTTTTTATCAGGATGAAATCCACTCTGACCAAGAGAGGGGTGCACATCAAATCCTCGGGGTACAAGGTTATCCACGTCACTGGGCGT
CTTCGTCTCCGTGTGTCCCTGTCCCATGGAAGGTCGGGGGCTGGGCAAGTGATGGGTCTGGTTGTGGTGGCCCATGCCCTCCCGCCCCCAACTATCAATG
AAGTTCGAATCGACTGCCACATGTTTGTAACTCGTGTCAACCTGGACCTCAATATTATATACTGTGAAAATAGGATCAGTGATTACATGGACCTCAATGC
TGTGGATCTAATGGGTAAAAGATGCTATCACTTTATCCATGCTGAGGATGTGGAGGGCATCAGGCACAGCCATCTTGACTTGCTAAACAAGGGCCAGTGC
GTCACCAAGTATTACCGCTGGATGCAGAAGAACGGGGGCTATATCTGGGTCCAGTCCTGTGCCACTATCTCTATAAATGCCAAGAATGCCACCGAGAGAA
ACATCATCTGGGTCAACTATATTCTTAGTTTGCAAGAATACAAGGACATCCCCATGGATATCGCCCAGCTTCCGCACTTACCTGAGAAGACATCGGAATC
CTCTGAGACATCTGACTCTGATTCGGACTCCAAGGATAACTCAGAAGACAATGAAAATCCAAAGTCAGATGGAAAGGGAAATCACTCAGAGCAGAGCGAA
GATCATGAACCAGACCACAAGCAGCCGGGGCCCCACTCTGATCCAGATATGAACTGTGATGAAGAAGGGAACAGCTCCAGCGATGCCTGCAGCGAGGAGA
GTGAAGAAAGTGAAGACTGTGAATTGAGGAAGGCAGAGGAGGTGATGGAGCAAGGGGGTTTGAGTGCCCTCGGAGGTATTGGTGCCCTGGATGCATTAGG
CCCAATGCACATAAAGGTGGAGCGTTATGCAGAGAGTGAGACAGACATGCGTGGGCCGGATTCATTGAGCTCAGACAGTGCCAAGGACTCTGAGAGTGGA
GACGAGGATGAAGATGACAGTGGAGTTCGAGTAGCAGGGGTGCTAAACCGTCACCAGAGGAGGAAAAGAAGGAGACGAAAGGGGGCAGGACCATGTGGAG
GACGCAGGAGGAGATTGTCTGGAGGATCTAGCCCAGGTGCCATAGAGAGCTCATTGGGGGACCCTCCTAGGCTTCTCCCCTCCACCCCTCCTCCCACAGG
AGCCTGCTCCTCTTCCTCTGTACTTAAGATCAAAACAGAAATGTCAGAGCCCATCAACTTTGACAATGACAGTAGCATCTGGAACTTTCCTCCAAACAGG
GAAATCTCCCGCAATGAGTCTCCCTACAGTATGACCAAGCCTCCCACAGGAGGTGAGCACTTCTCCCCCTCCCCATCCTCCTCAGCTGCCCCCCCAGCCC
TTCATGTTTCCATCCCGGACTCTGTCCTCACGCCCCCAGGTGGGGCAGAAGGAGCTGGACGCAACAAACCGCAATTTGCTGGATTGGCTACTGTCAGTTC
AGACCCCCTTTCCCCTCCTCTCTCTGCCTCCCCCCGGGAAAAGCCACCTCAGACCAGTGGCCCATCTAACTCTCTTCTGTATGCAGGGGAGCTAGAAGCT
CTGCAGAGGCTTCAGGCAGGAAATGTGGTTTTGCCCCTTGTGCATCGCGTGGCAGGGACATTGGCAGCCACTGGAAGCAGTGGGCAGAGGGTATATACCA
CAGGCACCATTCGTTATGCCCCTGCAGAGGTAACGCTGGGCAACCTCCTTCCAAATACTCACCCTGTGAACTTTGTGGATGTGAATGGCCCAGGATTTGG
ACTGGACCCCAAAACCCCAATGGAGATGCTCTACCACCATGTGCACCGATTAAATATGTCTGGCCCGTTTGGAGGAGCTGTGACAGGAGCTGGTCTTACC
CAAGTGCCAGCTGCTAGTGTCTTCACAACAGCAGAGGGAATCTTCTCATCTCTCCCCTTCCCTGTGTACAGCAATGGCATCCATGCAGCACAGACTCTAG
AACGTAAAGAGGACTGAGGGAACGAAGGAAAATGTGAATGAGAGACAGAGAGGAGGAAGAGGAGGAGTAGAAAGAAAGGACAGACTGCAGAGAGAGTGGA
GAAAGACCTTCTAAACTAACTGCAGAATGTAGGTTGTTATGTAGAGGGGTTTGGGGCAGCTAAATCTGGCCCCTCCATGTCTCCTCCTTTGCTGCCTATT
CCAAAGCCGTAAGGGGAGGTGGTGTGTATGAGCCAGTGTGATATGGTATTGCTCTCCCCACAGCAGTCTGGGACCAGTAGCCCCGTCTTCCGCACCACAC
ACAAACAATAACAGGGCTGCACAAAGCATTGACTCCCATTAGGCCACTTCCATCGGCTTTGGTTTAGTTAGCAGGTGCCTCTCCAGGGGACCGCCGGCAC
TGTGCCCGTTGCCCCATCCTTTTGTAAAGGGGGCAGCGGCTGTGTTCTGATCCTTTACAACATAAAATATTCCAGCACTTTGACTCACACCTAGAATCCC
CCCTAAAACCCTGGAATAGATACTTCATGACTCTACTGTCTTAGTTCCCACCAGACATACTGGAACATGGCTTCCTTTTCTCTCTCTCTCTATTTTTTTT
TTTCCACTTTTTTATATTATAGATTATTATTTTTCTCATTATTTTGGGACATCTCCCTGTCTGCTGCTGGAGCGTTTTATCAATTAACTCCTTAGGCGCC
AGAAAGGCAAGAGTGCCTGCTATTCTGGCCCATTAAGGGTTATTAGTGCTTGCACTACAGGTCCTGGGAAACATGGCGTGAACCCTTCCCATGCCAAAGG
GGTTCCTAATGGTATTAACAGGCACCAAGTAAGCTGTGTATTGATGTACCAAGATGCCTTGCCATGGAAGAATGTGTGTGCTTGCTTTGTATTATATAGA
AGTCTAGGGGGCCTATTTATTATGCTGTGTAAAAACAGTGACATAATTCACCATCACCAGGATTCGCCACGTCAAAAAAACACCGCAATTTATTTACGCA
TTTTTTTCTTAGACTGGAACCTCCATACAATAGCTGTGTCAAATCTGGCGTTCAGACAGGGAATTTCCCACTTATCTTACACAGCTTTCTACGATGTTTT
TTTGTCGAATTTCCTTTTACACAGCATAATAAATAGGCACCTATATGTGTATGTATACATACATATGTACAGCTGTGTGTATGTGTGTGTCTATACATAT
ATGAAATGCACACAGTCACAGACTTTGTCACATGCAGGAAAGAGACCTTTCCTCCCCAGGCACATCCACCCAGTGTCTGGTTCAAAACTCATTTCCCACA
ATCCTCAGTATGTAGATAAGGTCACATTTTTCCTCGTTTACACCTTCTTCCTGGTCACTAGAAAGCTTGCCTCCACAGAGAGCTAGGGCTAATGAGAATC
CATATTTGCAGTGTACTGGGAGCTCCCAAGGTGCCCCTTTGCCCCCGCCGGGCTCTGTAATATCACTGCTGAGCTGTCGCCAAATAACGTGTGTTTCAGA
TTCTAGTTGTGGCCTAGATAGTAGTGGCTGTAATTGGTCATCACCCTTTTAATAACGTGACTTTAACTCCCTTTTTTCTGCCAGCAGGGCTAGCAAATCA
GATCTTTCAGGGATTAGGTTTAACTGTTTTTATGATATGAAAGGCAAACATGGACACTGATATGGCAGGTAATGCTGCTGATAGGTTCCTCTTGCACTGG
CAGTTCATTTTAATCACCACAAGGAAGCTGTATGGGAATGAGCACATATGGATGCTTAAGGGCTTTTCTGACTTACAGTCCTGGACCAGAGAACTGAAGG
GGTTAAGTTAAGCTGGCCATACACAGGTGGATATAACCTGCCTGTTCGCCCCCCCTCCCATGAGACCGCAGCTCTGTTGCCTTCATGATGGCCTGACTGA
CCAATATCTAGCTGGTCCAAAAACAAGGACCTCATCAACCAGTTAATGCCATTCTCTTCAGATACAACGACTTTTGGCCTGGCCAGACATTCAGATTAGC
CCAACACATTGGCGGCCCAAGTCTGCTCTCCAAACAAGCAGATCTTTACATTTATGCCCAGCTTTCATGGAAAAGGTTTGAGGGAACAGCTATGGAACCT
GAAGAAAGTAGGCAAAGTGGTTTGGGAAGGTCCTCCCAGCAGCTTCTTTGTTTAGGAGTCCTGTGTCCTGTACTAAAGGGACCACCTTAACTTGGGAGGA
AACTCCAGCTAGAGGCTCCCAGGCCCACCCTTGTAGATAGGAAACGTAGAGCCCTGGCTTGTCCCAGCGTGAAAGGGAATTCTTGCAGAAATGATTCAGC
TCCCCCGGTCCTTTCAGTTTGTAGGCAAACACAATGGGTACCGGCCAAGGTCTCATGAGACAACGTTGCTTGCATGGCCTATAGATTACTTAACCCCTTT
TGTGCTCCAGTCCCTAGGGCAGTTCTCATTCCATGGCCAGGGTGTCTGTCAGTGCAGAATAGCAGGGACAGGAGGCAGTATATGAGCGAAGGTGTCAGTA
CTTGCACAGACCACTTTACTAACCCCTCATGTTTTCCTGTTACATGTTGTGTGTAATGCCCTGCCCTGTCTTTATCTTGTCCTTAACTGAGGGGCTGTGA
GCTGGTTTCTTTATGCTTTATCTTCCATGTTTTTCCTCAGGCTTCTGTATCATTCCGACTCTCCTTCCGACGCACTTTGCCAGGCCGTCTAGATGGGGCG
CTGACCCTCCTAGATGGACCTGTAAAGCCACCACTTTCCTACCAATAAACATAACGGGTTTTGCTCTCATCCCTTGGGTAAGAACAGTTCCAAATTAGAA
TAAAGGAGCAGGAGGAGAGAAATAGAGACAAACTAAGCTGAGAAAATAGCAGAAGGCGAATAATATTCTCAGTTCCTAGGGAGAAATTGTGACTTTCAAA
TGGGGGTGGGGTGGGGGTAATAATGGTTTTTATGTCCTACTTCCAGTCTGTTTCGGCAGCTTATCTGTGAAACATCCAATACCAGGTGTGAGATTATGAA
ACGTGTTGCTTCGTGTATAAGATTAAAAAACAAAAAAAAAAAAAAAA
5' EST: CX798238 [+]gaggagagaagggagggcggtgtgatggaacccagtgatggagggatgcagcgctagttagatccgctctcaccctcgggaggaggtggagagcttggcc
gggctcagggctcatgcaagcggctgtgtgagcggagaatgtcggctccccccacactgggcccgggatgcccgctgctttgacccaccggacacagcgg
ggccgctgcccggaatatggcgcccaccaagcccggcttccagcaggacccctcccgcagagagcgtttacaagccctgcggaaagagaagtcgagggac
gcggctcgttctcggcgggggaaggagaactttgagttttacgagctggccaaacttctcccgctccctgcagccatcaccagtcaacttgacaaggcat
ccatcatccggctgaccatcagctacctgaagatgagagactttgccggccagggagacccgccctggaacctacgtatagaaggtcctccaccaaacac
ctctgttaaagttatagggtcccagcggcggaggagtcccagctccgtggcgatggatattttcgaatctcatatggggagccacattctccagtctctg
gacggatttgtatttgcactaaaccaagaaggaaaatttttgtacatttcggagactgtgtccatctaccttggcttgtctcaggtggaactgacgggaa
gcagtatgtttgactatgtgcacccaggggaccacgtggagatggcagagcagcttgggatgaaacttccccctggtcgagggcttctttc
3' EST: CX798237 [+]aatcttatacacgaagcaacacgtttcataatctcacacctggtattggatgtttcacagataagctgccgaaacagactggaagtaggacataaaaacc
attattacccccaccccacccccatttgaaagtcacaatttctccctaggaactgagaatattattcgccttctgctattttctcagcttagtttgtctc
tatttctctcctcctgctcctttattctaatttggaactgttcttacccaagggatgagagcaaaacccgttatgtttattggtaggaaagtggtggctt
tacaggtccatctaggagggtcagcgccccatctagacggcctggcaaagtgcgtcggaaggagagtcggaatgatacagaagcctgaggaaaaacatgg
aagataaagcataaagaaaccagctcacagcccctcagttaaggacaagataaagacagggcagggcattacacacaacatgtaacaggaaaacatgagg
ggttagtaaagtggtctgtgcaagtactgacaccttcgctcatatactgcctcctgtccctgctattctgcactgacagacaccctggccatggaatgag
aactgccctagggactggagcacaaaaggggttaagtaatctataggccatgcaagcaacgttgtctcatgagaccttggccggtacccattgtgtttgc
ctacaaactngaaaggaccgggggagctgaatcatttctgcaagaattccctttcacgctgggacaagccagggctctacgttttctatctac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 0.5-1.5 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn3 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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