XB-CLONE-3390121
Clone Name: IMAGE:7652217
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Gene:
shank2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC136044 [+]
GTCTCCCAGCTGACAGACAGGATGAGGGGTGGGCTCCTCCGCCCGAGCCCTGGGTGCTGCTTGCCCAGCTATGCTCCGTCTTCCACTCTTCCCGGGCTCT
TCCTTCTCAACCCAGGGTGCAGGCTGCCAGCTCAGAGTCTGGATAATCCCCCCTCCCTGCCTTCCTTGGGGGATCTCTACTGAACTGCTGCCTCCAAAAT
GAAGTCTTTGTTCAGCGCTTTCACAAAGAAAGAAGTGCCATTCAGGGAAGCGCCCAGCTACTCTCATCGGAGAAGGGGGCCCCAAAGCACTTTAGCAGCA
CCCAGAGTCTTACTTCGTTCCAACAGTGACAACAACCTCAACGTCAACAACCTCCCGGAGTGGTCGGCCTCCTCGGCCTCTTTACACCGCAGCCTTTCAC
CACAGCTACTGCAACAGATGCAGAATAATCCTAATGGTACAGTGAAAACGATTGGGAGCTATGCCCAGGTACCTCGGAGCCGCTCGCCATCGCTAAACCG
CTTGGGGGAGGATGCGAAGAGGCAGCAGCACAGGCACATCAGTCCTGGTGCTAACAAGGAGTCCGCGCCTGCCTTGGATTTTCAGGGTCCCAAACGCAAG
CTGTACAGCGCTTTGCCCGGAAGGCATTTCATCGTGGTGAAATCCTATCAGCCCCAAGGTGAAGGAGAAATCCCCCTCCATAAGGGAGACAGAATACGAG
TTCTGAGCATTGGCGAAGGAGGATTCTGGGAAGGAAACGCCCGGGGACATGTGGGATGGTTTCCTGCAGAATGTGTGGAAGAGATTCAGCCCAAGCCCAG
TGATGGACGCCCAGAGACCCGCACAGACAGAACCAAAAAGCTCTTTCGACACTACACTGTTGGATCTTATGACAGCTTTGATGCATCCAGTGACTGCATC
ATCGAGGAGAAGACCGTGGTGCTCCAGAAAAAGGACAATGAAGGTTTTGGATTTGTGCTCCGAGGGGCAAAGGCTGATACACCTATTGAGGAGTTCAACC
CAACACCAGCCTTTCCGGCCCTGCAGTACCTGGAGTCAGTGGATGAGGATGGGGTGGCTTGGCAAGCCGGCCTACGCACTGGGGACTTCCTGATTGAGGT
CAACAACGAGAATGTGGTGAAAGTTGGCCATCGGCAGGTAGTGAACATGATCCGGCAAGGGGGCAACCACCTCGTCCTCAAGGTTGTGACGGTGACCAGG
AATCTGGATCCGGATGATACGGCGAGGAAGAAAGCCCCACCACCGCCAAAGCGGGCCCCGACTACCGCGCTCTCGTTGAGATCTAAATCAATGACCTCAG
AGCTTGAAGAACTTGCAGTGGATATAGCCTCTGTACGGAGAAGGAAGGACAAAGCAGAGGATTCCGGTCCCATTCCAAAGCCCCTAAGACCACTGGACAA
CGCAGCAGTAGACTCCAGAATTGCCACAGTAAAACAGCGCCCAACTAGTAGATGCTTCCCCGCTGCTACAGACACAAATTCAATGTATGATAGGCAGGGT
ATCGCTGTAATCCCGCCCACTGCTCCGGGAAGCCATCAAGGTCCATTTCTGGGTATACCCCGTGGCACAATGAGAAGGCAAAAATCCATAGACAGCAGAA
TTCCTTTGTCAGGCATCACCGAGGAGGAACGGCAGTTTTTAGCGCCCCCTATGTTGAAGTTTACTAGAAGTTTATCCATGCCAGATGCCTCTGAGGATAT
CCCGCCTCCACCAGCAACCTTACCACCATCACCGCCACCTCCTTCACCATCTTCTTTCAACTCCCCTAAATCTCCAGCTCCCAGGGGGTACGGAACCATT
AAGCCGGCCTTCACCCAGAATTCAGGAACAAAGTCTCCGTCGCCAGCCGTACGGTCGGACAACGTCGGGACAATCGCCAGAGACAAAAGTATGTTCTACA
GGCACGAGGCCAACAGGTTCTCCTTGGACTCTGAGGAGCTGTACAACGCCAGCATGGCCAACCAGCAGAACTTTATCAACAAAAGAAGCAAAATGCCCGA
AAACCCTTACTCCGAAGTAGGAAAATTAGGAAATAAAGCGGTGTATGTTCCAGCCAAACCTGCCCGGCGGAAGGGAATGCTGGTGAAACAGTCCAACGTG
GAGGACAGCCCTGAAAAGACCTGTTCCATTCCCATCCCAACAATCATCATTAAAGAGCCTTCAACCAGTAGCAGCGGCAAGAGCAGCCAGGGCAGCAGCA
TGGAGACGGACCTCCAGATCTCAGAGCAAGTGGGGCAGTTGCGGCCTGATGATAGTCTTAATGCAAGTAGTCCGTTTGCAGCTGCCATTGCTGGAGCAGT
GAGAGACCGGGAAAAGAGACTAGAGGCCAGGCGCAATTCTCCAGCCTTCCTGTCAACGGACTTGGGGGATGAGTGTGTGGGCCCCAAACCAAGCCCGAGG
TTGCAGCATTCAAAGTCTATCGATGATGGAATGTTTTTCAACGATGAGCACACAAAGCATCTCATGGCCCCCAGCTCTTTGGTTCTCCCCAGAGGATCTT
CCAATGCCTTCACCAACAACGACTCCAGCCATCAGGGGGATGTGAGCAATGCACGGATGTCTAAGATCAAAGGGCCTGAGAACAATGCAGCTCCAGCAAA
AAGTACCAACTCCTCTGGTAATTACATGCATCCAGTTACAGGCAAGCTGCTCGATCCCAACTCACCTCTGGCCCTGGCCTTGGCAGCTAGAGACAGAGCT
CTGAAGGATCAAAACCAGCCCAGCCCTAGCCCTACAGATCCAGAAAAAGCAGATCTGAACAAGCCACTTTATATAGATACCAAGTTGCGCTCTGGCTTGG
AGAGCTCCTTTTCCGTTGCAACAATCAATGCAAATAGACCGAACCAGAGAGGGAAGTTGAAGAGACAGGAGACGGAGAGTAAGCACGACCTGGACTCATC
CAAGGAGGAGAAACGGCAGGAAGAGAAAAAGAACATGCTGATCAACATCATGGACACCTCTCAGCAGAAGACAGCTGGCCTGCTCATGGTACATACAGTA
GACACCACCAAAGCAGATGATGCACTGGCTGAAAGTGAAGAAGCGGAGAAGGGCACGCCACCTGAGAACTCTAATGCTCCAGTATCAGAACCCAGGGAAG
AGTTAGAGAATTCCTTACCCAAGGCCAACGTGTTAGGAACCCCCGCAGCTCCCCTCAACAAAGCCATCGTATCCGTGTGCTCTGTGGAAGAGCCGGTTAT
CTTACCCTTCCGTATCCCTCCTCCTCCTTTTGCCTCAATGGATGTGGACGAGGACTTTATTTTTACCGAACCACTGCCTCCGCCGCTGGAGTTTGCCAAC
AGTTTCGAAATCCCTGAAGATGCTTCGCAAATGCCACCCGCTACTCTGGCTGATTTGTTGATTCAGAGGAAGAACGGAGCTTTTCTTCCACCTTCATTTA
ATCCCAATGTTGCCTCGAATTCTATAGATAGCAAAAGGCCAGCGGTCCTGACTAACTGCCTGCCCACCTCTTTCATGCAGCACCCCGAAAGCTTCGATAA
CGTGACTGACTCTGGGATCGAAGAGGCGGACAGCCGAAGTGGCAGCGACCATCACTTAGAGACGACGAGCACTATTTCCACTGTTTCCAGTATATCGACC
TTGTCTTCGGAGGGGGGAGAGAACCTGGACACATGTACAGTCTATGCAGATGGGCAAGCGTTTCTAGTGGACAAACCCCCTGTACCTCCAAAGCCAAAAG
TGAAGCCCATAATCAACAAAAGCAATGCACTTTATAAGGATGCTGTTCTAGAAGAGAACCTAGATAATTTTCCAGTCCCCCCTCCTGCTCCACCTCCTCT
ACCTTTAAGTATTCAGCCCAGCATGACCAAAGCTGGACAGCAAAGGACCTCCAAGTTATGGGGCGACAACACGGAAGTCAAAAGCCCAGTCATGCCAAGC
CCCAAAGCCAATGTTATTAGTGAACTGAATTCCATTTTGCAACAGATGAACAGAGAGAAAGCTACAAAGCCAGGGGAAGGGTTGGATTCACCCACTGGCA
TGAAAACTGCAAATCTCAGCACAAGGGGCACAGATGCCTTGAGTACAGTCTCAGGTAACAGAAGTACCACGGTCACTTTCACCATCCGCCCTGGAGCCAA
CCAGCCAATCTCGTTACAGAACAGGACACCCGAGTTTGAGGGCCGGGTTACAGGAATGCGCCGCGCCCCCAGCCCTGTGGTATCACCAGCCGAGATCACG
AGAGATATAAAGCCCGGCCCCCTGTCGGCTCCGCCGGCCTCCATGTCCGACGTCTTTATCTTACCCAGTCAGCCCCCCTCAGGGGACATGTTTGGGATGA
GCATGGGGAGAAGTAGATCCCCTTCCCCTTCCATTTTACAGCAGCCAATCTCAAATAAGCCTTTTTCTGCAAAGCCGGTCCACATGTGGACTAAACAGGA
CGTGGCAGACTGGCTGGAAAGCCTCCATCTAGGAGAACACAAAGAGATGTTTATGGATAATGAAATAGATGGAACCCACTTACCGAACCTTCAAAAGGAA
GATCTAATAGACCTCGGAGTCACCAGAGTCGGCCACCGGATGAACATAGAGCGAGCTTTAAAGCAGCTTTTGGACAGATAAAAGTACCTAGCGTTGCCTC
GACGACTTTTTCTCCCCCCCTTTTCCACGACCCTTGTCTTTCCGACGGGCGAATTTCTAAACGGGGGTCCCTGAAAACAAATTGAATTATCTTTCGTTAC
CGCAAGTTTAAATAGCTGTACAGATAATTTATAAAGCACAATATTTTACGGAGATCAAGTGGCTGGTCTACTGGGCTGCCATGGTGCCACTTTGGTTCTA
GAAAGAAAAAAAAAAAAAAA
5' EST: CX814593 [+]tctcccagctgacagacaggatgaggggtgggctcctccgcccgagccctgggtgctgcttgcccagctatgctccgtcttccactcttcccgggctctt
ccttctcaacccagggtgcaggctgccagctcagagtctggataatcccccctccctgccttccttgggggatctctactgaactgctgcctccaaaatg
aagtctttgttcagcgctttcacaaagaaagaagtgccattcagggaagcgcccagctactctcatcggagaagggggccccaaagcactttagcagcac
ccagagtcttacttcgttccaacagtgacaacaacctcaacgtcaacaacctcccggagtggtcggcctcctcggcctctttacaccgcagcctttcacc
acagctactgcaacagatgcagaataatcctaatggtacagtgaaaacgattgggagctatgcccaggtacctcggagccgctcgccatcgctaaaccgc
ttgggggaggatgcgaagaggcagcagcacaggcacatcagtcctggtgctaacaaggagtccgcgcctgccttggattttcagggtcccaaacgcaagc
tgtacagcgctttgcccggaaggcatttcatcgtggtgaaatcctatcagccccaaggtgaaggagaaatccccctccataagggagacagaatacgagt
tctgagcattggcgaaagagattctgggaa
3' EST: CX814592 [+]ctagaaccaaagtggcaccatggcagcccagtagaccagccacttgatctccgtaaaatattgtgctttataaattatctgtacagctatttaaacttgc
ggtaacgaaagataattcaatttgttttcagggacccccgtttagaaattcgcccgtcggaaagacaagggtcgtggaaaagggggggagaaaaagtcgt
cgaggcaacgctaggtacttttatctgtccaaaagctgctttaaagctcgctctatgttcatccggtggccgactctggtgactccgaggtctattagat
cttccttttgaaggttcggtaagtgggttccatctatttcattatccataaacatctctttgtgttctcctagatggaggctttccagccagtctgccac
gtcctgtttagtccacatgtggaccggctttgcagaaaaaggcttatttgagattggctgctgtaaaatggaaggggaaggggatctacttctccccatg
ctcatcccaaacatgtcccctgaggggggctgactgggtaagataaagacgtcggacatggaggccggcggagccgacagggggccgggctttatatctc
tcgtgatctcggctggtgataccacagggctgggggcgcggcgcattcctgtaacccggccctcaaactcgggtgtcctgttctgtaacgagattggctg
gttggct
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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