XB-CLONE-3389794
Clone Name: IMAGE:7652385
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Gene:
chrm4
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC122953
[+]
GTGATAATAATGGCGAGCGGGAAGGGGACTGCGCTGCGGGGCTACTGAGTCCGGGGGCTACTGAGTCCGGGGCACCATGAGTTTCCTGGAAGGGCCGCTC
CCCCGGGAGCACTCAGATCTATTCTACAACCTCTCCATCCCTTACTGGCTCCAAGAGATGGAAAATATGACAAACGCCACCAACCAGACCTTGGACAAAA
CCACCATGGCCCCTGGAACGTACCAGACAATGGAAATGATCTTTATCGCCACCGTAACTGGTTCCCTCAGTTTGGTCACTGTGGTGGGCAACATCTTGGT
CATGCTCTCCATTAAAGTCAACCGGCAGCTACAGACAGTCAACAATTACTTCCTGTTCAGCTTGGCCTGCGCTGACCTTATCATAGGCGTGTTCTCCATG
AACCTCTACTCTCTTTACATTATAAAGGGTTACTGGCCGCTTGGACCTATTGTGTGTGACCTGTGGCTGGCGCTGGACTATGTGGTGAGCAACGCTTCTG
TGATGAACCTCCTCATCATTAGCTTTGATAGGTACTTCTGTGTCACCAAACCACTGACTTACCCAGCACGAAGAACCACCAAGATGGCGGGGCTGATGAT
TGCAGCCGCTTGGCTTCTCTCCTTCGTGCTCTGGGCACCTGCTATTCTTTTCTGGCAGTTCATTGTAGGAGAGAGGACGGTGGCAAGTGGGGAATGTTAC
ATTCAGTTCCTTAGCAACCCGGTGGTCACCTTTGGTACAGCCATCGCTGCCTTCTACCTTCCGGTGGTCATTATGACTATTCTTTACATCCACATATCTC
TTGCCAGCAGGAGCAGAGTCCGCAGGCACTGCACTGAAACCCGACAGGAGAAAAAAAAAGCCAATCAGCTCCATGAAGAGCCCTCTAATTAAGCAAACGA
AGAACCTTCCCAAACAAGACCCCGGAGATGAGGCGGTCAAAAAAGAGAACGGGGTGAGGAACGGCAAGATTGAGAAGTCAATGACCAACCTGCAGACAGC
TGAAGAAAAAGAGACCTCCAATGAATCCAGTTCAGCCAGCCTGTCTCACAACCCTCCGGAGAAGCAGCCTGTAAGTGACGCCTCTTCAGGGGTTGTCCTG
GCCCCGACCCAGAACATGCCACCGCTGCCCTCAAAAGTGAATGTTGCTTCCAAATGGTCCAAGATCAAGATCGTCACCAAGCAGACTGGCAATGAATGCG
TGACGGCTATTGAGATTGTTCCAGAATGTGCCATTCCTTTGCCCCAACAGGCCAATAACAGGCCGGGCAACGTTGCTAGAAAGTTTGCCAGCATCGCCCG
CAACCAGGTGAGGAAAAAGAGGCAGATGGCAGCCAGGGAGAAGAAGGTGACCAGGACCATTTTCGCTATCCTACTGGCTTTCATCATTACCTGGACACCA
TACAATGTCATGGTCTTGATCAATACCTTTTGCCAGACATGTATCCCTGAAACCGTTTGGTACATTGGGTATTGGCTCTGCTATGTCAACAGCACAATAA
ACCCAGCCTGCTATGCCCTTTGCAATGCCACCTTCAAGAAGACCTTCAAACACCTCCTCATGTGTCAGTACAAAAGCATCGGCATGGCCAGATAGGCAAC
AATGACTCTTCTCTGGCTTTGCCGACCTGTTGGCGAGGAGAAGGCATTTCAGAAGCCTTGAGCATCATACCCGCCGCCAGCAAGGCTTCTGAAAATCCCC
CCCCCGGCACCCACAGGGCAAGGCTGGCACAGGAGATTCCAGTGGAAGGCATTTGCACTAGTAATGAGCTGAGCTGGCAGCCAGGCAGATGGGAAGCTGC
AATTGGACAGTCAAGTACACGGGATAAAGACATGTAGACACATTGATTGTGCGCCACGCAGGGGAGGGCGGTGGGCAACAAACAAGCACCTTGTGGATTA
GGATTTTACAAATCGTGCCATCTGAGTCTCTCCGGCTGAGGCACAGCTTCCCAAACCCAATAGACTTTGGCTTGGTGGGGGTACGCAGAGTCTTGTAGTT
GAACAGTGACTGGAGTGCTGAAGACTGATACCCCCTTACTACCTTCCCAAGGATATGCGTTATGTAGCTCTGGTTTCTTGTAGACTGTGGTCTCAACTCA
CTGTGACGATTGGTTTACTAAATCAGCTGAATATCCCCATATATTTAATGGGGTACTATCAAAATACATGCCGCCCCCCATTTTTTTTAAACAACTGTCC
CCCATGTTTTTACACAGACTTCAGTACTCTACACAGTCTTGCCTGCTCTGCTTTCCTTTCATCCATGGTGCAATACTCTTGCTATTCGCTGCCCTCTAGT
GGCAGGTCATGGAAATACAGCAGTTTATTGCAGGGTAAGCTGCAAGACAATATCACAGCCTTTTATTTTGACAGTATCCCTTTAAACATTAAAGGAAAAA
TGGGTACCCACCACATCCCAGGAGCCTACAATGGGGTGGGGGGGGGGGGGTCTACAAAAAGCAAGAGCGGAGCCAAAGACAGGACAGAGAGACTGGACTC
TAAAGGATTTTACTTTGCCCAGCTTGGGAGACTGGCAGAATCATTCCGTGCCACAGGGCATAGCAGGACTACCCACAGCTTTCATGGCTCTTTAAATTAA
CTGTTTCCATGCCTCATTCCTTATTTTCTGTTTTCTTTTTGCTGGCTGAGCACTTTCTGGGGGATTCCAGGATAATTACTGTGCCATAGGGATGCTCCGT
GGTTGGACTGGGGTGGTGGGTGGTTTGGAGAATATCTCTCCCCTTTGACTTTGAGTTGAATTGGGATAACAGTGGGGTGGGGATTGGTAGCTGTGTGCAC
AAATCATTTCCTATCTGCATTGCTGTATATATAAATAATTAGTGGGAGCTGCCATTATGCTTACCCAGGCTGATTTATTGGGGATTCGATATAGGACCAC
CATTATCACAGCCAGGTTTAATGGTTCCCCTTTATGGATAGATGACTTTTTTCAGCCTCAGCTACTATGTAACTATGTTGGGGGCCATATGGATCCCCAT
GTGATATCAGCGCTGGGCCAAGGCAATATTTCTTGTGCTGTGTTATTCCCCTTCCCTCATTGGCTGCTATTCCCACCCCCTACCCACTTGGGCCACACCC
ACCCCCTACACCTCTTGCACCCCTTTTCCACTCTTCCCTTGTTCCGCCCATGTGTTCTACACCAGGCTGTGCTCATTACTGTTTTATTGGCGGCGTTGAA
GGGTCCATGAATCCCTAGGAGTTCTATAGCCGCTACCCCTACACCCTATATATTTGCCTTCTTTGTCAATATCACATCAGTTGTTTAATAACCGCTATGT
ATTGCACCCACAGAGGAAATCAATATGGCAGCTCCTGCTTTTTATAGCAAATATCCAAAGAAACAATGCTCTAGGTGCACATGTTAAAGGGGAAGTTAAT
GGCTCCTTACTTGTGGATATATTTTTCACTTTTGGAAGCAGCTCCATGGGATTGGGCTGACATTTTCAAAGCCTGGCATTCTATTGGTTACTGGTTTTAG
CTAATTGTAAGATCTGATGAAATAATAACAAACACCAGGGCACTGGATCTTTATTTTCTCATTGGATTTCAACACAATAGCACCCCTAGTGGTTTAATAT
AGACGGACGTGTTTTGTTGAGGTGCATGGAAAATATATCCCATTTGTGTCTATTGATCCCTTAGGATAAGGGGCTTCCAATTAAAAAGAGTTATACCAAT
TCAGTAGCTATAGCAACCAATCATCAGTCAGCTTTCATGGCTCCAGTGCAGTTCTGGTAATGAAAGGACAGATTTTATTGGCTGATGAGGGTTACTTCAC
TAAAACGGATCTTCAGAGCCTCTTGGTTACCCCAGAAGTGATCCGATACACCCCCGACTCTTAATCCTACCGTGTCTCTGGGACCAAAATGATCGACAGG
TGATTTTATGACTTATTGTGTAAATAATATATGGAAAAGTCTATGTACAAACTGAATTGTCAGATATTTTTATACAGTGCTTTTATTTAATGATTGTCAT
TATTTTTTGCATGATCCCGGCACCTACATAAAGGCCAAGCGCCGCCTTTAACTATTGGGGGAGGGGGACCAGGCGTCCAATTAAAGTTCAATTAAAGAGA
TAAATTCTGTTTAACCATTTACCCTAAAGCTTATTCCCTGCTGCCCGGGCGTCTGTATTCTCTCTCATTTCTCTTATAAACGGCTGCTGTGTTTTCTGGA
AAAAAAAAAAAAAA
5' EST: CX815105
[+]tgataataatggcgagcgggaaggggactgcgctgcggggctactgagtccgggggctactgagtccggggcaccatgagtttcctggaagggccgctcc
cccgggagcactcagatctattctacaacctctccatcccttactggctccaagagatggaaaatatgacaaacgccaccaaccagaccttggacaaaac
caccatggcccctggaacgtaccagacaatggaaatgatctttatcgccaccgtaactggttccctcagtttggtcactgtggtgggcaacatcttggtc
atgctctccattaaagtcaaccggcagctacagacagtcaacaattacttcctgttcagcttggcctgcgctgaccttatcataggcgtgttctccatga
acctctactctctttacattataaagggttactggccgcttggacctattgtgtgtgacctgtggctggcgctggactatgtggtgagcaacgcttctgt
gatgaacctcctcatcattagctttgataggtacttctgtgtcaccaaaccactgacttacccagcacgaagaaccaccaagatggcggggctgatgatt
gcagccgcttggcttctctccttcgtgctctgggcacctgctattcttttctggcagttcattgtaggagagaggacggtggcaagtggggaatgttaca
ttcagttccttagcaacccggtggtcacctttggtacagccatcgctgccttctaccttccggtggtcattatgactattctttacatccacatatctct
tgccagcaggagcagagtccgcaggcactgcactgaaacccgacag
3' EST: CX815104
[+]tttttttttttttttccagaaaacacagcagccgtttataagagaaatgagagagaatacagacgcccgggcagcagggaataagctttagggtaaatgg
ttaaacagaatttatctctttaattgaactttaattggacgcctggtccccctcccccaatagttaaaggcggcgcttggcctttatgtaggtgccggga
tcatgcaaaaaataatgacaatcattaaataaaagcactgtataaaaatatctgacaattcagtttgtacatagacttttccatatattatttacacaat
aagtcataaaatcacctgtcgatcattttggtcccagagacacggtaggattaagagtcgggggtgtatcggatcacttctggggtaaccaagaggctct
gaagatccgttttagtgaagtaaccctcatcagccaataaaatctgtcctttcattaccagaactgcactggagccatgaaagctgactgatgattggtt
gctatagctactgaattggtataactctttttaattggaagccccttatcctaagggatcaatagacacaaatgggatatattttccatgcacctcaaca
aaacacgtccgtctatattaaaccactaggggtgctattgtgttgaaatccaatgagaaaataaagatccagtgccctggtgtttgttattatttcatca
gatcttacaattagctaaaaccagtaaccaatagaatgccag
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41414.jpg) |
Usage:
Suppliers: