XB-CLONE-3310888
Clone Name: IMAGE:7654326
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Gene:
trim32
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC135998 [+]
ATCGGATTGCCTGCCGCAGATCATGCGTGACATCTTACAAGTAGCTTCAATACATGAAGGGTGATTATTTCTCAAGTCCTTAAACTCTTCCATTAATAAC
ATTAACAGGAAACTATGGCTGCTGCCTCTGTTTTAAACGTGGATGCCCTGCGAGAGGTGCTTGAATGCCCCATATGTATGGAAGCATACACTGAAGAACT
GCTGAGACCCAAGCTCTTGCAGTGCGGTCATACCACATGCACACAGTGTCTGGAAAAGCTGTTGGCCAGTAACATAAATGGAGTGCGTTGCCCCTTTTGT
AGTCGGGTAACACGTGTCACCAGCTTAGCCAACTTGGCTGATAACTTGACTGTTCTAAAGATCATTAACACTAGTGAGTTGGGCCAGACTGTTATAGGAT
TGATGTGCAAATCCTGCAAGCGAAGATTACCACGGTTCTTCTGTAAGAACTGCATTGTTTCATTATGTGATGCCTGCAAAGAAGCAGATCACGTGCTACT
AAACCATATTGTACTTTCACTACAAGATGCTGCCAATGAACGCAGAAAAACACTAGAAGAAAGGCTTGCTAAACTCAGACAGTGCATGCAGGATCTGCAG
AAAAGGAAGTCCATATTGGAGGGTCTCACTTCTCAGGTTAAGTGCAAATACAAGTCAATTTTACAAGATTACAGCAAAGAGGAATGTCGAGTTCAGGAAG
AGTTAGCTCGCTCACGAAAAATGTTCACGGCATCTTTGTCAGAAGTTGAAAAACTGAACAGCCAGATGCTTGATGAACAAGCTTATCTACTTAATATAAC
TGAAGTGCAGCTGGTTTCTAGGTGTGATTATATTTTGCTAAAAATAAAGCAGTCAGATACAGCTCTTTTGGAAGACTCTCTAGAAGAAGAAGCTGAGCCT
GAACTTGCAGCTGACTTGACATCAGAGCTTACCTTGCAGGATCCTGAGTTCCTCAAAGTAGGGCATGCTGGACCAATACAGGTTGGCCAAGTTGTCAAGA
AGCCATACATTGTAAATATGCAGGAACCTCTTCCTGAAGTTTCTACATTTACTACAATTTCATATAAAGAGATGGATATGCAGTCAGAGGAGATTAGCAG
TGTCCAGTCTTGTCCATCTGCTCCACTTACCAAAATTCCTGAAGCATCATGCAACTTGCAGCAGTGTCAATTCCTAAGGAAGATGGGCTCTAAAGGAAAC
ATGCCTGGCATGTTTAACCTTCCAGTGAGTCTTCATGTTACTGCACTAGGGGAAGTGTTGGTGGCTGACAGAGGCAACTGCAGAATCCAGGTCTTTAACC
GAAAAGGTTTCTTGAGAGAGATTAGGCGAAGCCCATCTGGAATTGACACTTTTGTGCTGAGCTTTCTTGGGGCAGATTTGCCCAATCTCATTCCATTATC
GGTAACAATGAACTGTCATGGCCTTATAGGAGTGACAGACAATTATGATAATTCAGTGAAAGTGTATACAATGGAGGGACATTGTATAGCATGCCACAGA
AGTCAGCTCAGCAAGCCTTGGGGCATTGCAGCTATGCCCTCGGGTCAGTTTGTGGTAACTGATGTTGAAGGAGGGAAGCTCTGGTGCCTAACCGTAGATC
GCAGCTTGGGAGTCGTCAAGTACAGTCGGCTCTGCAATGCTGTGCGTCCAAAGTTTGTCACTTGTGACCAGGAAGGGACTGTATATTTTACCCAAGGACT
TGGCCTTAACCTAGAAAACCGTCAATTTGAGCATCATCTAGAGGGTGGCTTCTCTATTGGCTCTGTAGGGTCTGATGGACAGCTAGGGAGACAGATAAGC
CACTTCTTTTCCGAAAATGAAGATTTTCGCTGCATTGCAGGGATGTGTGTTGGAGCTCGTGGAGATTTGATAGTGGCAGACAGTGGTCGTAAAGAAATAC
TTCATTTTCCTAAAAGTGGAGGCTACAGTATCTTAATTAGGGAGGGCCTGACTTGCCCAGTAGGAGTTTCTGTTACTCCTAAAGGACAGTTGTTGGTGCT
GGATTGTTGGGATCACTGTATTAAAATATATAGTTATAATGTACGCAGGTACTCTACCCCTTAGGTGAAACCCTGTTTACAATTCCTAGATACCACTCAG
GATTCTAGAACAGACAGTCCCTGTGGACGTCAGAAACCATAAAGTAGTAGTAAAACTGTTTAAGTGCTAGCTTGCACACCAGTACATTTATAGCACTTAA
ATAAGATACATATGTATGTAACTCACATCATTTCTGGCCTAACTGCCCTTATGTCATGTAACCTTCTTAAATGTGAATGTTCTTAAAAATGAAGTCTCAG
TCAAGAATAATATAGAGTAGTTTTGTCAACTGTGAGTTAATGTATCTCAGGACTATCTGACTATCAGACAGTTAAAAAATAAATTAGAGAGGGTAATTTA
CTTATGCATGGTTAGTAATACATGGCAAAGTATATTAATAGTTAAAACACAACTAGACTAGACCCTTTAATTGTAAACTGACTGCTCAGTTATAATAAAA
CGAAGAAAACAAAGCATGATATGCTCAGCATTACAGGAGAGAAATCTCTTTCTGATTCTAACAAACACTCGCTGGTTTCTTAATAGACACATCAATTGAA
ATGAAGCTTCCACCATCTGTTCTGCCCAGGAATTACAGAAGGGACATGATTTGCAGTCATGTCATGAGAAGTGAGATGGAAAAGCTTTAAGTCTCTGGTC
CTGTCATTTATTTCTTACTACTTGTTCCTGTCTTATTACAGACACAGAGATAGAAAATAAAGCTGGTGCGATTAACCCTGCTCACCTATTTGTACACTGC
CCTTAAGATTAAGGATAAAATATCTCGCCAACTTTATTCCAGTCATACTCAGAGTAAAATCAGTCAGTTAAAATGATCTGTGTATACAAAACTGTAATTA
CTTGATTTTATGGGTGGAGTATTAAATCAGTGTGTTATATTATTCATTTAGACCTTTTAGTAATTGAATATATCCCTAATTTTCCACATTATCTAAGATA
CATTTCTTTCTGATGTGCAGCTGCTAGTACTGAACATGTATTAAATAAAGCAATTACCAGATATAAAAAAAAAAAAAAA
5' EST: CX823836 [+]atcggattgcctgccgcagatcatgcgtgacatcttacaagtagcttcaatacatgaagggtgattatttctcaagtccttaaactcttccattaataac
attaacaggaaactatggctgctgcctctgttttaaacgtggatgccctgcgagaggtgcttgaatgccccatatgtatggaagcatacactgaagaact
gctgagacccaagctcttgcagtgcggtcataccacatgcacacagtgtctggaaaagctgttggccagtaacataaatggagtgcgttgccccttttgt
agtcgggtaacacgtgtcaccagcttagccaacttggctgataacttgactgttctaaagatcattaacactagtgagttgggccagactgttataggat
tgatgtgcaaatcctgcaagcgaagattaccacggttcttctgtaagaactgcattgtttcattatgtgatgcctgcaaagaagcagatcacgtgctact
aaaccatattgtactttcactacaagatgctgccaatgaacgcagaaaaacactagaagaaaggcttgctaaactcagacagtgcatgcaggatctgcag
aaaaggaagtccatattggagggtctcacttctcaggttaagtgcaaatacaagtcaattttacaagattacagcaaagaggaatgtcgagttcaggaag
agttagctcgctcacgaaaaatgttcacggcatctttgtcagaagttgaaaaactgaacagccagatgcttgatgaacaagcttatctacttaatataac
tgaagtgcagctggtttctaggtgtgattatattttgctaaaaataaagcagtcagatacagctcttttggaagactctct
3' EST: CX823835 [+]ctggtaattgctttatttaatacatgttcagtactagcagctgcacatcagaaagaaatgtatcttagataatgtggaaaattagggatatattcaatta
ctaaaaggtctaaatgaataatataacacactgatttaatactccacccataaaatcaagtaattacagttttgtatacacagatcattttaactgactg
attttactctgagtatgactggaataaagttggcgagatattttatccttaatcttaagggcagtgtacaaataggtgagcagggttaatcgcaccagct
ttattttctatctctgtgtctgtaataagacaggaacaagtagtaagaaataaatgacaggaccagagacttaaagcttttccatctcacttctcatgac
atgactgcaaatcatgtcccttctgtaattcctgggcagaacagatggtggaagcttcatttcaattgatgtgtctattaagaaaccagcgagtgtttgt
tagaatcagaaagagatttctctcctgtaatgctgagcatatcatgctttgttttcttcgttttattataactgagcagtcagtttacaattaaagggtc
tagtctagttgtgttttaactattaatatactttgccatgtattactaaccatgcataagtaaattaccctctctaatttattttttaactgtctgatag
tcagatagtcctgagatacattaactcacagttgacaaaactactctatattattcttgactgagacttcatttttaagaacattcacatttaagaaggt
tacatgacataagggcagttaggccagaaatgatgtgagttacatacatatgtatcttatttaagtgctataaatgtac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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