XB-CLONE-3308785
Clone Name: IMAGE:7656263
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Gene:
hectd2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC153336 [+]
GTGGAAGTGCTCGGCTCCATCAGAGCGGAAGGCAGGCGATACTTAGAAACTGCCCAGACAGGAGTAAGGCTACAGACAACGGGTACTTCTGACACAATGC
CTGCATTTATTTTCGGGGGGCGGCCTGCACGAAAGACACGACCAACTGCAACACAATGGGATAATCAATAAAAAGAAATCATATGCTGCAGCATTTCACT
TCCAGCGCTCCCCCTTCATCCGCTCCACTCCGGAGCTACTGCTATGTAGCCCAGCCCAGTCCAGCTGGGGTAAACACATTGAAAGCAGCCGGCTGGGCTG
GGTGAGCGCAAACAGGCGCCGTGCTGCTGCTGCTGCCGCCAAATAGTCGCATTTCATTTGAATGACAAGTCGGTAGCGCTGGTACCTACCGGTACAGGTG
CAAGGACCCGGTGCATTTTGCGTTGCTACAGTCGGTTCTGATTGCTATGTCCGCCGGATCCCCAGACTGCCAGATGGACGAGGAGGAGAGACAGAGAGAC
AAGCTTCCGCCAATCCTGTGCGCAACTAGCGCAGCCTCCGGGGGAATGGATAGAGGAGCCAAGGGGCAGTTCTCCACATTCAGCAATTTCATTTCGACTA
TCAACCAGAAGAAAGAAGCCGCTGGAAACAGAAACTCACCTACCCAGATGGTTTTACCTAATAACAAAAATGTCCGTGACCTTCCTCCAATTTGCCTTGA
TGTCAGACAGAAGCAGTGCATTTCTATTGACACGCTGCCCCCAGAGATGAAGGCCTCCATCCTTCCTGAACCTCAAATCCCAACACGCAACAAAACTCTG
AAGGACTTTCAGGTGGATTTAGAGAAAGCAAAATCAACAGGAGAATGGAGAACAATACATGACTTCTATTTAACGACATTTGATTCATTTTTGGAATTAA
ATGCTGCATTTAAGAGAGACGTCAGTTCCTTTGTTAACACAATTGAGGACTCCAGAATCAATACAAAATTTCTGAATGCTGTGTATGACACCTTATTAAC
AACTTCTCAAGATATCCAGAAAACTGTTCTGAAAGGAATTATTAACAGTCTGTTAAGGGAATGGAAAGGGCCAAGAACAAAAGATGACATCCGCGCCTAC
TTTATTCTAACACAGAATCCACAGTTCAGCAGTACATCTACCTATGTCATCTATGCCCATTTGCTAAGGCAAATAGCTACCCTTTCTGACACTGACAACC
ATTTTCTAATTCACTGGTTTAAAAAGATGTCACAGAAGCGCTTCAAGCAATTGGTGGACAGGCTGCTGCAGTTCATTTCATTACGACTCTTTCCTGCAAA
GCCCGAAGAATTTCCACCCTTGGCAAAATGTACCTGGTGGATTCCCTCTGCAACCAAAGTTCTTGCTTTACTAAATGCTGCTAATACCCTTAGTAACCCA
CCTCTGATCCCTTACACTGATTTTTATAACTCCACTTTGGATCATATTGATCTCATGGAGGAATATCAGACGTGGCAGTTCTATGGAAACTCTCACAGAT
TCTCTTTCTGTCAATTCCCATTCATTATATCTATTGCTGCCAAAAAAGTAATTATACAGAAGGATTCTGAGCAGCAAATGATCAGTATAGCACGGCAAAG
CCTTGTGGACAAAGTTTCTCGACGGCAAAAACCTGACATGAACATGCTGTTCTTGAATATCAAAGTGAGAAGGCTGCAGTTAGTCAGTGATTCACTTGAT
GAGCTTACCAGAAAAAGGGCCGATCTAAAGAAAAAGCTGAAGGTCACATTTATGGGGGAGGCTGGCCTTGACATGGGTGGCCTTACCAAAGAGTGGTTTC
TCCTGCTCATCAGACAGATTTTCCACCCAGACTATGGCATGTTTACATATCACAAGGATTCAAATTGCCACTGGTTTAGCAGCTTTAAGTGCGACAACTA
TTCAGAGTTTCGACTTGTTGGAACTCTGATGGGTCTAGCTGTATATAACAGCATCACTTTAGATATCCGCTTTCCACCATGCTGTTACAAGAAGCTGCTG
AGTCCTCCCATTGTTCCTTGTGACCAGAACATGCCTGTTGGCATTGCACCTGTCACTCTTGATGACTTGTATCAGATCATGCCAGAGCTGGCTCATGGGT
TAAATGAACTTCTATGTTATGATGGTAACGTGGAAGAAGATTTTTATTCAACATTTCAGGTTTTTCAGGAAGAGTTTGGAACAATAAAATCATACAATCT
CAAGCCTGGTGGAGATAAAATACCAGTAACCAATCAGAATAGAAAAGAGTATGTCCAACTTTATGTAGACTTTCTCCTCAACAAGTCAATCTACAAACAG
TTTTCAGCATTCTATTATGGATTCCATAGTGTTTGTGCTTCCAACGCATTAATGTTACTTCGTCCAGAAGAGGTAGAAATTCTTGTTTGTGGAAGTCCCG
AATTAGACATGCATGCGCTCCAGAGAAGCACTCAGTACGATGGATATTTAAAGACAGATGTCACTGTGAGATACTTCTGGGATGTTGTTCTTGGATTCCC
ACTTGAGCTACAAAAGAAGTTGCTACACTTTGCCACAGGAAGTGATAGAGTACCAGTGGGGGGGATGGCTGATTTAAATTTCAAGATTTCAAAGAGTGAG
ACACCCAGTAACTGGTTGCCTATAGCACACACTTGCTTTAACCAGCTTTGCCTGCCTCCATACAAGACGAAGAAGGAACTAAAACAGAAGCTGACAATTG
CGATTTCAAATGCTGAAGGATTTGGCCTACAGTAGGACAGTGGCAGCTCTGCTACAACATTGAAAGTTTCTCAATTCCTCTGTCATTTTAATTTATTTTT
GTACTACTTTGCACTGAGAGCAGCAGAGCAGACTACTCGTCCAAATTTTTATTTTGTGCCTCAGGTTTCTGACACAATAGACTGATAGACCTTAAACAAC
ATTGCCGAGAGGTATTCGGAATGCTCGTAACCTGCTTGTGAGCATATTTGCCATCCTTCTTGCCATCAGATGTGCTGAGAAAGTGTCTTCGCAACACTGT
TTTACTAGCAGGTTTAGGTAATGGAGTTTGTATTTGAAGATTTAGGCACATATTTAAATGTTTTCCTACAAAACTTTATGCAGGTCACTGAAGTTGCCAA
ATTGACCATTATTCTGTCGCTAGTTTACTATGCTTTACTAAAATACAGTAAAGCTAATATATTTATTTTAAAAAAAAAAAAAAA
5' EST: CX827185 [+]tggaagtgctcggctccatcagagcggaaggcaggcgatacttagaaactgcccagacaggagtaaggctacagacaacgggtacttctgacacaatgcc
tgcatttattttcggggggcggcctgcacgaaagacacgaccaactgcaacacaatgggataatcaataaaaagaaatcatatgctgcagcatttcactt
ccagcgctcccccttcatccgctccactccggagctactgctatgtagcccagcccagtccagctggggtaaacacattgaaagcagccggctgggctgg
gtgagcgcaaacaggcgccgtgctgctgctgctgccgccaaatagtcgcatttcatttgaatgacaagtcggtagcgctggtacctaccggtacaggtgc
aaggacccggtgcattttgcgttgctacagtcggttctgattgctatgtccgccggatccccagactgccagatggacgaggaggagagacagagagaca
agcttccgccaatcctgtgcgcaactagcgcagcctccgggggaatggatagaggagccaaggggcagttctccacattcagcaatttcatttcgactat
caaccagaagaaagaagccgctggaaacagaaactcacctacccagatggttttacctaataacaaaaatgtccgtgaccttcctccaatttgccttgat
gtcagacagaagcagtgcatttctattgacacgctgcccccagagatgaaggcctccatccttcctgaacctcanatcccaacacgcaacanaactctga
aggactttcaggtggatttagagaaagc
3' EST: CX827184 [+]tttttttttttttttaaaataaatatattagctttactgtattttagtaaagcatagtaaactagcgacagaataatggtcaatttggcaacttcagtga
cctgcataaagttttgtaggaaaacatttaaatatgtgcctaaatcttcaaatacaaactccattacctaaacctgctagtaaaacagtgttgcgaagac
actttctcagcacatctgatggcaagaaggatggcaaatatgctcacaagcaggttacgagcattccgaatacctctcggcaatgttgtttaaggtctat
cagtctattgtgtcagaaacctgaggcacaaaataaaaatttggacgagtagtctgctctgctgctctcagtgcaaagtagtacaaaaataaattaaaat
gacagaggaattgagaaactttcaatgttgtagcagagctgccactgtcctactgtaggccaaatccttcagcatttgaaatcgcaattgtcagcttctg
ttttagttccttcttcgtcttgtatggaggcaggcaaagctggttaaagcaagtgtgtgctataggcaaccagttactgggtgtctcactctttgaaatc
ttgaaatttaaatcagccatcccccccactggtactctatcacttcctgtggcaaagtgtagcaacttcttttgtagctcaagtgggaatccaagaacaa
catcccagaagtatctcacagtgacatctgtctttaaatatccatcgtactgagtgcttctctggagcgcatgcatgtctaattcgggacttccacaaac
aagaatttctacctcttctggacgaagtaacattaaatgcgtggaagc
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: