XB-CLONE-3308283
Clone Name: IMAGE:7656710
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Gene:
lrch2
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC136058 [+]
CTTGCTAACGGAATCGTTATAGCAGGGCTCCCCCTTAGCAGCAATGGCGGCCAGTCTGTCTGCGGCTGGGGGCTCCGGTGGTCCTGGAGGAGGAAGTTCA
GGACCTGGGGGAGGAGGCAGCGGTGGGAATGCTACCATACAGGGTACCGGCTTATGTACGGCCTCGTTGTCCATGCACAGTGGCTTCCCCAATGGACCTA
ATTGGAGCACAGGGATCATTTATCAGCACACGGCAAGAAGCTTGGACCGGGCCTTGGAAGAGGCGGTCAACACTGGCATCCTCAGCTTGAGCGGCCGAAA
GCTCAGGGACTTTCCTGGTACCGGCTACGATCTGACGGACACTACACAAGCAGATCTCTCCAAAAATAGATTTACTGAAATCCCACCAGATGTTTACTCA
TTTGCACCTTTGGAAACCTTAAATTTATACCACAACTGCATCAAATGCATTCCAGAGACCATAAAAAATCTCCAGATGCTAACTTACCTAAACATTAGTC
GAAATCTTCTATCAACCTTGCCAAAATATCTCTTTGACTTGCCATTGAAAGTGTTGGTCATTAGTAATAATAAATTAGTTTCTATACCAGAAGAAGTTGG
GAAGTTGAAAGATTTAATGGAACTGGATGTCAGCTGTAACGAACTGCAAGTTCTCCCTCAGCAAGTAGGAAAGCTGCATTCACTAAGGGAACTTAATTTA
AGAAGAAATAATCTCCAAGTATTGCCAGATGGTAAGTTTTTGAATACCCATGAAGTATGAGGAGTGGTACAGTACAGAAGAAACAAGTCAGGAAAAAAGT
CTTCAGAAGTCAGATTTGTCACTTAAGAGCCCATGAACAATTACTTATTGGTTGTGTGTTCTGTATTGCTATTCAATCCTATTATTTTAATCCCAGAATA
TGAAATTGCACCAAATAATCACAATTACCATGTTTCCTGTCTTTAGAGCTGTCATTCTTACCTTTGGTAAAATTGGATTTTTCATGTAATAAAATTACGG
AAATCCCAGTAAGTTATAGAAAACTCCGTCATCTAGAGCTTATTATTTTGGACAATAATCCTATGCAGATGCCTCCTGCCCAGGTATTTAAAATATTCTT
TACTCACTTTTCACTTTCCCTTTTGTCTAATACAGTTTTATTTTAAACCCAGTTCCACTTGGAACTGCTTATGCAGGTTGGGGAACTGCTGTGTATGTGG
TGGTGCATGCACATTAAAATACGCATTTTTTATTGTATTGCCCAAGAAACACATTTAACAAATATTGTTTACTGTTAACTTTTTATATGTGCATTGCTAA
TGGTTTGTGTTTTGCTTCATAAGGTGCACTGAGGTCTTTGGTATTATCAGGTAAACTACCTGGTATTAATACAGCACAGATATGGGATCCATTATCTGAA
AACGACCGGTCCCATACCTGTATATAATTCACAAGTCTTGAATAACCTGTGAAAATATGTACTTATGTTGCGAAGTCACTTTTGTAACATGACTCACTGT
ACCTTGTTGATATGAAGATATTAGGCTAATGCCACACAGAGGCTGATAGAATCTGCCTTAATGTTGACATTAGCTTTCTTCTTTGGTTATATTATGCTCT
ATATAGTACGTAAAAGCCCTGAATCTAGTATAAATTACTAGTTACGCATATGTTACAAGATTAAAAGGTGATAAGTAGATCAACGCTTTATTATATTACT
AGTTCTTTATATTTGTAAAACTTAAATGTAAATATTTTATATATTTCTCTATAATGGAATATTCACCTATATAATCTTTGGGGGTTTTTTTGTGTAATTT
CCTTACATTTGCAGTTTCGGAAATTCAACTATTTTATTTCCATGCTATTCTCATACAGATTTGCCTAAAGGGTAAAGTGCATATATTTAAATATCTCAAC
ATTCAAGCTTGTTGCAGAACAGAAAAGAAGCCAGACTCTCTTGACTTGCCTTCTTTAATAAAACGAATGCCTTGCCAACCTCTAACAGACAGTATCGAAG
ATTTTTATCCAAATAAAAATCATGGCCCAGATTCTGGGATTGGTAGTGATAATGGAGATAAGCGTCTGTCAACCACTGAACCATCAGATGATGATACAAT
CAGCCTTCATTCTCAGGTGTCAGAATCAACAAGAGATCAGTTACCAAAAATTGACAATCAAATACTTGGCACAAAACCTGATCCTAATAAAGGTCTTGAA
CATGATATTTATGATTACGACCCAAGTGCCGAAGAAGCTCTCTTATCTGACCGGGGAGATGTACAACTTAGTAGCCCATTTGTAACATATATCAAGGAAA
GAGGAAAACTTGAAATTGAGAAGGTTGAAGAAAACGAGAAATGGGATGAAGAGAGTAGGCTTCAGAAAGACCAACTTCTGGTTGAAGAAGAAGAAGATGA
AATAAAGGAAGTGATGGACTTGAGAAAAATAGCAGCACAGCTACTGCAGCAAAAAAAAAAAAAAA
5' EST: CX828005 [+]cttgctaacggaatcgttatagcagggctcccccttagcagcaatggcggccagtctgtctgcggctgggggctccggtggtcctggaggaggaagttca
ggacctgggggaggaggcagcggtgggaatgctaccatacagggtaccggcttatgtacggcctcgttgtccatgcacagtggcttccccaatggaccta
attggagcacagggatcatttatcagcacacggcaagaagcttggaccgggccttggaagaggcggtcaacactggcatcctcagcttgagcggccgaaa
gctcagggactttcctggtaccggctacgatctgacggacactacacaagcagatctctccaaaaatagatttactgaaatcccaccagatgtttactca
tttgcacctttggaaaccttaaatttataccacaactgcatcaaatgcattccagagaccataaaaaatctccagatgctaacttacctaaacattagtc
gaaatcttctatcaaccttgccaaaatatctctttgacttgccattgaaagtgttggtcattagtaataataaattagtttctataccagaagaagttgg
gaagttgaaagatttaatggaactggatgtcagctgtaacgaactgcaagttctccctcagcaagtaggaaagctgcattcactaagggaacttaattta
agaagaaataatctccaagtattgccagatggtaagtttttgaatacccatgaagtatgaggagtggtacagtacagaagaaacaagtcaggaaaaaagt
cttcagaagtcagatttgtcacttaagagcccatgaacaaatacttattg
3' EST: CX828004 [+]tttttttttttttttgctgcagtagctgtgctgctatttttctcaagtccatcacttcctttatttcatcttcttcttcttcaaccagaagttggtcttt
ctgaagcctactctcttcatcccatttctcgttttcttcaaccttctcaatttcaagttttcctctttccttgatatatgttacaaatgggctactaagt
tgtacatctccccggtcagataagagagcttcctcggcacttgggtcgtaatcataaatatcatgttcaagacctttattaggatcaggttttgtgccaa
gtatttgattgtcaatttttggtaactgatctcttgttgattctgacacctgagaatgaaggctgattgtatcatcatctgatggttcagtggttgacag
acgcttatctccattatcactaccaatcccagaatctgggccatgatttttatttggataaaaatcttcgatactgtctgttagaggttggcaaggcatt
cgttttattaaagaaggcaagtcaagagagtctggcttcttttctgttctgcaacaagcttgaatgttgagatatttaaatatatgcactttacccttta
ggcaaatctgtatgagaatagcatggaaataaaatagttgaatttccgaaactgcaaatgtaaggaaattacacaaaaaaacccccaaagattatatagg
tgaatattccattatagagaaatatataaaatatttacatttaagttttacaaatataaagaactagtaatataataaagcgttgatctacttatcacct
tttaatcttgtaacatatgcgtaactagtaatttatactangatcagggcttttacgtactatatagagcataa
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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