XB-CLONE-3307499
Clone Name: IMAGE:7657357
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Gene:
npas4
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC121975
[+]
GACACAGGCATCTAGGGAGATAGAGAAGGGGATACCACACTGAGTAGAAGACTGCAAACAGCGAGACGGAAAGGAAAGACGAAGCAAGGAGACAGGGGAT
CTCTGGACTGATTATTCCTCAGCATCCCGGAGACCCCAACAAAAATGTACAGGTCTACGAAAGGCGCTTCGAAGGCTAGAAGAGACCAGATCAATGCAGA
GATACGCAATTTGAAAGAACTTCTTCCTATCTCTGAAGGCGACAAAGTCCGTCTGTCGTACCTTCACATCATGTCCCTTGCTTGTATTTATACAAGGAAA
TCTGTCTTCTTTTCAAGAGGTAAGATCTCAAATGTTGTAACACTATAAAGTGACTATTTTCATTGGTATGAACATACACTGATTTGTTATATCTGTCTGA
TGAGAATCTTCTATTGTGTTCCTATAGATATATTTTACCTACTTTAATATGTTGACTGTTGCTACGTGCTATTTAGGAAGCTTTGAATAACTTGAATCAC
TTGTTGCCCAGATAATATAATTAAAACGTCATTAATGTCCCCAAATTTTTAAAACATGCTCCCATTCTAGTGGTTTTTATAAACGGCTTGCTGTCCTTGG
TACTGAACCATACAGTAAAGTTTTCTTTATCGCTGTCCAGGGTCCTGAAACCAATTCAGTACTGCTTGGGAATTTGAATAGAAATGATAAAAATCTTGTG
AATGGTATAATATAGATAAACTACATTTTACTTTTTACCCAACAGGGCAACAGGCAGAGGAATTAGAAGGTCTTCTCTCCAACCAGGACTTGATGGATTT
TGTCCATAGTCTTCCTGGGTTTCTACTGACATTCACAAGTGAAGGAAAGCTCATTTATGTATCAGAAAATGTAGCTGATCATCTTGGACATTCAATGGTT
GATCTGGTGGCTCAGGGGGACAGCATCTATGACATAATCGACCCTTCTGATCATTTTGTGATGAGGAACCAGCTAGCAATGCCTTCATCTCCAGATAGTG
AGAGAATGTTCAGGTGCCGATTCAACACTTCAAAGACAGCTAGAAGGCAAAGTGCAGGCAACAAGCTGGTTCTTATCAGAGGAAGATTTCAGCAACCACC
AGCTGGTACCTATTGGTCATCCAACCCCGTATTTACAGCTTTCTGCATTCCTCTTGATCCCAAGCCTAGAGTGATACAGAGTCATTTATTGGTGGATTTC
TTTGAGAGTCAGCATGCAAAGGACCTAACTGTGCTGGATGTTTCAGACAGTATTTTACAGTACTTGTGGTATGAAAAAAGTGATCTACTCAGCAAGTCCT
GGTACAATCTAATTCATCCTGAAGATCTTACTCATCTCTCCAAACAGCATCTCAAGCTGTTGAATGAATCCTGTGAAGGCAGAGCAGAAGTTGTAATACG
TCTGCAAAGAAAAGATCAACTATGGGTTTGGGTGTATTCCATTCTGATACTTGAGGCCAGTGAGGCGTCCATCACTTCATATAATTATATAACCAGCGAG
GAAGAAGCCTGGTGCTTGAGGCAGCAGCTGACCTCCGAGGAGACCCCAGTCTCTTTCTCAGCAGGGGCATCCTCCTATCAAGATACCCTTCTTTCTCCAG
GAGACCTTTCAAGTCCAGATCAAGTCTTCACACCCCTTGCAAACACACCAACAAGTGCAGGACAGTCATTTGATTTCTCAGAGCCCATGACTATTGGTTC
AGAAGATCCAATTCTTTGCCAGACCACTATCCCTCTTGTCGAAGATCCTGTGGCCCCTGAAGGCCAATCAGAGAATCAGTCTATCTTCACACTCTTTCAA
CCAACTTCACATGAGCATACCTTCAGAAGAGATCAGCTTGGGACACCCAAAGAATTCACCTGCACGCCACCTTATACTCCACACCAAAACTGTTCTTTCC
TGTTTGGGACTCTAGAAAACCCCCCTCAAACAACATCTGAGCAAGAAACCACCATCCTTAACCCTGAAATGTATTATTCCTATTGCAGCTCACTCTATGA
GAAGCTTCCCCCAACTCCAGACAGTCCAGGGGATGGTGGTGACTGCACAGTAATGAGGGTACCTGAAATTCCAGGACCACTGTTTGTGGATCTGCCAATG
CTTCCAGAGGGGTTAGTCACCCCTGAAACATCACCAATTACCCAAGCTATGTTTAAATATTCAGAGCAGGAGAAGAGTGAAATAGACCTCCTAGTCAAGC
AAATTGGTTCTTTGGCCAATGTCTTCAACAATGTAGCCACAAAAGAATTCTCACCCTCTGATACCATGTTACTGAACGGCCACGGACTGGCATACAGAAG
TGTCTCACTACCTGCGTGTCTTCCCGAAACTGACACTACTGCTCCTTTCCCACGGTCCTGGAAAAGCATTGACCTTTCAATATTCTTAACTTGCCAGGAC
CCATCACTTCCAAGTAGTGGACACCCAGTCTGCAGCCTATTCAAAGACTTACCTGACTCACCCCCTTTTGCAGAAACAGGGTCTCCCTGCAGTGCCCTAG
AGGAGGATGAATTAGGAGGAGACCTCTCTGCCTCCCCATCCATGACCTCGAATGTGACGACGGATCTGTCGCCAGAAGAATGTAACTTCTTAGAGGAACT
GATGTCCTACAAAACAGACCTTGAGGCAGGTGCCTCAGAGATTCAATGTGACCGGTTTAATGATGAGTTGTATCAACTCCAGATTCAGCTGCAAGACGGC
TTCCAACAAGATGGAAGTGGAAAACCTTCGTTTTGAAATAAGTCTGTGACTTACTTCGATATGTATGGCATATTGTCATATCTTCAGCAGATTTCTGCTA
CCTTACAAACAATGAAAGAAATAATGCACAAAACACGGAGTGAAAATGGCTTTCTGCGCCATGAACACCCTTGTTCGCTTAAGAACTGTCTTATTTCAGT
TTTTGCTTCCTTTTCTCTGCTCTTTTTAGATCTTGTGCACGTTGACATTATACAGATAGTTACCTATCTTTTGCCAATTTAAAACAAAGCAACGGCCCAT
CCTTAGATACATTCTGTTTGAATGTTAATCTAGTCGGGAACAAAACGTACAAACACACAATAAATGTTTAAGCAAAAGTCTTTTCTTGCAAAAGATCTGC
AATGAAACACATGGTTTCAATATCAATTCTGGTATTTATAAACAAAACAGTTGGCTATGTTCAAATAATAAAATATTTTGAAAGTTATTTTAACCTTTAG
CAAAAGGATGGGCCATTGCTACTCTATTTGTACAACAAATATGTCTGTTAAAATAGCTGGAAGAATAGACCAGAAAGTGGACAAAAATTGGTTATTGTAT
AAAGCAGTTGTAAGTAGTCTTACATATCAAAAATGTATTCACTCGTAGTGAAGCTAAAATAATATATACATTGTATTTTTAATTTTTGTTCAGTCCATAA
AATTGGTATGTTTATATTTAAAGCAGTTTCCAGGAACCAGAGCTGTCCAACTGAAAGCCTGGGCACATAAAGTGACCAGATTGTATGTTTATGGACCCTT
ATAACCAAGGGTTCCAGCATTTTATCATCTGGCCAATGTTCGATAGACAGTAGGCCCTCTACTTAGCCAATAGCTGGACAGCAAGGCTGGAAGTGATACT
GAAAAACCACAGTTCTTTAGATTGCTGTACTAGAACTGAATTTTCTACCCTTGCTCCCCCATATAATAGTAAGGTTTATTACTCCTAATCTGCTCCTCTT
CAGAACACGTTGCACTTTACCGACCTATTCGGTTGATTAACAGTTTATTAATGTTAACTCAAATTTAGAAAACAATGGGATTACATTAATTCCAGAAAAA
AATATGCAGTGGGATAATGGTACAACACATGGAAAAAACATTTACATTAAACCTCAATTTTAGCGGCAGAAAAATGGTTTTACATACAAGCAAAGCTAAA
TTGTGCATTTACAATGCATTTTAACCAACTGCACCTTTGAAGTTTAAAAGAACAACGTTCCCTTTACTTATAACTCAATATATGGGTAATATTTACCAAA
GGGTGAACCCAGTATTAAACAGAATTTACTAAAAGAAAACACCCCTATTCGCTTATTTAGGGGTCTCTTTTTAGTGAATTTTGTGGTAAATATTTTGTTC
ACCAGTTTATCGATTTGCCTGATGTCAGATTTAGAGGGGAAGTTAAAAAAAAAAAAAAA
5' EST: CX829255
[+]cacaggcatctagggagatagagaaggggataccacactgagtagaagactgcaaacagcgagacggaaaggaaagacgaagcaaggagacaggggatct
ctggactgattattcctcagcatcccggagaccccaacaaaaatgtacaggtctacgaaaggcgcttcgaaggctagaagagaccagatcaatgcagaga
tacgcaatttgaaagaacttcttcctatctctgaaggcgacaaagtccgtctgtcgtaccttcacatcatgtcccttgcttgtatttatacaaggaaatc
tgtcttcttttcaagaggtaagatctcaaatgttgtaacactataaagtgactattttcattggtatgaacatacactgatttgttatatctgtctgatg
agaatcttctattgtgttcctatagatatattttacctactttaatatgttgactgttgctacgtgctatttaggaagctttgaataacttgaatcactt
gttgcccagataatataattaaaacgtcattaatgtccccaaatttttaaaacatgctcccattctagtggtttttataaacggcttgctgtccttggta
ctgaaccatacagtaaagttttctttatcgctgtccagggtcctgaaaccaattcagtactgcttgggaatttgaatagaaatgataaaaatcttgtgaa
tggtataatatagataaactacattttactttttacccaacagggcaacaggcagaggaattagaaggtcttctctccaacaggacttgatggattttgt
ccatagtcttcctgggtttctactgacattcacaagtgaaggaaagctcatttatgtatc
3' EST: CX829254
[+]tttttttttttttttaacttcccctctaaatctgacatcaggcaaatcgataaactggtgaacaaaatatttaccacaaaattcactaaaaagagacccc
taaataagcgaataggggtgttttcttttagtaaattctgtttaatactgggttcaccctttggtaaatattacccatatattgagttataagtaaaggg
aacgttgttcttttaaacttcaaaggtgcagttggttaaaatgcattgtaaatgcacaatttagctttgcttgtatgtaaaaccatttttctgccgctaa
aattgaggtttaatgtaaatgttttttccatgtgttgtaccattatcccactgcatatttttttctggaattaatgtaatcccattgttttctaaatttg
agttaacattaataaactgttaatcaaccgaataggtcggtaaagtgcaacgtgttctgaagaggagcagattaggagtaataaaccttactattatatg
ggggagcaagggtagaaaattcagttctagtacagcaatctaaagaactgtggtttttcagtatcacttccagccttgctgtccagctattggctaagta
gagggcctactgtctatcgaacattggccagatgataaaatgctggaacccttggttataagggtccataaacatacaatctggtcactttatgtgccca
ggctttcagttggacagctctggttcctggaaactgctttaaatataaacataccaattttatggactgaacaaaaattaaaaatacaatgtatatatta
ttttagcttcactacgagtgaatac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41414.jpg) |
Usage:
Suppliers: