XB-CLONE-3301402
Clone Name: IMAGE:7659462
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Gene:
nub1
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC136238 [+]
GACTAGTTCTAGATCGCGATCTAGAACTAGTTCAGGAAGAAGGCTGATCGGGTTACACAGCTGCAGGGGAAGCGCAGTTTATTCCTGATGGCAGAACGAA
AGTTTTTGGTGGCCCAGCTGACAACATTTTTAAGAGAAGATCGGATACAGCTATGGAAAGCTCCGTATACCACAGAAACGCAAGAGACAGGTCCTGAACT
CAAAGAGCTTTCGCAAAGATACTCTGACCGGCTGAAATACAATGTGGAGGACATCACCGGCGCTCTGGAGGAAATTCGCTGTTGCGCAATCCAGCGTGGA
ACTGGAAACCAAACGTTTAAGACAAAGGGAGTGGCCACTCTGCAAGTTTTCCTGCCAAGGAAACAGAATAAGGGCTCCAGAAACTTCATTGAGACTTCCC
TAAATGTTACTGGAAAGGAGCTGAGGAGTCAGATAGCACAAACATATGGATTTCAAGAAGATTACATAAAAATAATCATTAACAAGAAACAGCTTGAAAT
GGACAAAATGCTGCAGGAACAAGGCGTCAGCCACAACATCAAGGTGCTTGTCCTCGAGTTGCAGTACACAGAGGAGGAGGCCAAAAAGCGAACGCACGAA
GAAGAAAAAGAAAGAGAAAATGCAGAGAAAAGAGACGAGAATATAAAGAAGAAGATGATGCGCACCAAGAAGGGTCTGGAGATCTTAGCTGAGAGGGGTG
AATCATATGACTCAGAAAGAGCTCCGTACCTTGAGATAGCCAATCAAACAGGAAAGCCGCTCAACATTCCTCAAGCTGCAAAAAAGGCGCTGATGCTTGC
CATGGGCTATCACGAAAGGGGGCGAGCATTCCTGAAGAGAACAGAATATGCCTTAGCGCTGCCCTTTCCCCTGGACGCAGACAAACATTTCTGTGAGTGT
GGCAGCGAGCTGCTGAATATGGTTGATAATTATGCCGTCCTCCAACTTGATATTGTGTGGTGCTACCTGCGCCTGGAGCAGCTGGACTGCCTGGATGATT
CAGAGAGCAAGCTGGACATAGCCCAGAAGTGCTTCAATAAATGCTACGGAGAGAACCACGAGCGGCTGGTCCATATCAAAGGAAGTTATGGCCGAGAGAA
AGTGCTGTTCCTAAGGCTTTATCTGCTCCAGGGAATAATAAGTTATCACAGCGGGAGAGCCCAACAGGCAGCAGAGAAGTTGGCCAGGGCAAAAAGCTTA
TACAATGAGCTCTCTATAGACCCCAGCAAAGTTGAGACCTTATTACAGCTGGGCTTCTCTGCACAAGAGGCTCGCCTGGCTCTCAGAGCCTGTGATGGCA
ATGTCGAACATGCTGCAAACCACATTGAATGCAAAAGAGAGGAAAAAGCCAAACTTAAAAAGGAAGAGAAGGAGAAGAGGAGGAAGAGACTGGACAAGAT
AAATATCCTGAGAGGCATGGGGTATTCGGAACGAGCTGCGGCAGAGGCACTCAGCCAAACTGGAGGAAACATTGACCGGGCTGTTCAGCTTCTTCTTGAT
GCCCCAGAACAATTAATTCCAAGTGGTAACCCAGCGAGCAGCAGTTCCTACCAGGTTCCACCGGAGAGTGTTGATCAGTTGGTGTATATTGGCTTTAGCC
GGGAAGCAGCGGAATCCGCCCTCAGACTGTTTCAGGGTAACACCGAGCTGGCCTCCCAGGTCCTGGCTCACCACCAGGGAACTCTGCCGTCTCAGCTGCT
GCAGGAACTGGAGAAATCATCTGTGCCGTCATCCTCCGAGGCTGCAGGGTCGAGTTCCTCCAGCGCCGAGGAGGGGGATATTGATCCGGTGAAGGAGATT
TTGGACGACATTCCAGAACACGAGGAGGATTATCTGGATCTGACATTAGAGGAGGAAGGAGTCGCGCTCACTGAGTATCTTTCTTACTTAGAGAAACTGT
AGCCTGTGCCAACATGGCTCCCAAACCTTTATATGATCACTAGGGCTTTTATACCAGAGTGCTGGCCAATCAGCGCCCTTTGTTTTTACTAAACCCTCAC
CCTTTCCCGCCTGTAACATCTCTGCCCAGACATTGGTCTTCCCCTGTATCCTGCAAGAATGTTCCATACGTGTTGCCATTGTGTTTCACTCCGCCTGTCC
AATAGGGTGCGCTGGCCAGTCTAATGGGGAGGATTATTTCCTGGACAATCTAGTTTGACTAGCCAGCAGAAAAACATGGCTTCCCTTCTTCTGCCTCTTG
CCCCTTCAAGGGGTGGGACCATTCAAACTCGTGCGGAGTGATGTAACCCAAAGCAACAAATCATCAGCGTTTAAAAGCAAGCTTCTGATTGGTTGCATTG
TACCTTTAAAGTGTTATACGCCCGTGGGGTCAGTTTTTTCTCAGCGTGGAGAGACTGGGCATGCCTAATATACATTAAAGAGACAGACACTCACCAGCTG
TGTTAGAATAACAACCCCCATCACCCTCAGCAGGTAGCTGTGTATCATGGGAGTTTTAGTTCAGCAATATTCTAAGGGCTAAGGTTGAATATACCTTCTC
TACTCCCTGTATGTGAACCTGTATCATCGTTTTAGTGTAGAGAATATGGACCTCCTTTGGGGGGAGATTCCCCTGGTCCCGGCAAACTGATACCAGCAGG
GAATTAGAGCGCCAGGCTGCCAACATAAGGCAGGAGGAGTGCAGTAATAAAGCATTTCCATGTGACATACTATAAGAAATAGAATATGTGACTTGCACAG
ATTTATTACTCCCTGCCGTTGACAGTTAGTTCCCCTTTAAATAACCCATTTTTCCTTCTTTATCTGATTTGCTCTTCCTCCTACAGTGCCTTACAGTGTT
CTTTATGGGAATGAACCCATCATAAATCTATGAAATACACCTTTATAGGGTTTTTATCAATGGTGCTCCAAATTACAGAGCAACCCCATATCTGGAAATG
TAATATCCTATTTCCAGACCTTTGTATATATGTTTATATATAATATCCAGCCTGCATCTCATCAGCAACAACGCCCAGTATGTTAAACACTTTGAATGCT
GGGAGTTGTGGGACAGTACCAGCTGTTGGGCTGGTCTGATGGATAGTGTTGTAGGCCCGTGTCAGACAAGAGAACACTGGGCAGTCTATTTATTAGTCAC
TCCTGCTCGGCGCCCCCTACAGGTGCCTTAATGATACACAGTGCCCAGTAGCACATCGTTGTACTGAGAGTGGGCATAGCAGCAGGTTACTGGTACCCCA
AGTGCCTTGATTTCTCCTCTTTGCAGTGTTTGTGGTGTTTTACTGTTTTATGTATGTTTATCTGTATTCCCTGCAGCACTAGGGGCACAGGGAAATATGG
TGGCATTTGCCATGAGAATAAACCTGTTGAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
5' EST: CX839154 [+]ctagttctagatcgcgatctagaactagttcaggaagaaggctgatcgggttacacagctgcaggggaagcgcagtttattcctgatggcagaacgaaag
tttttggtggcccagctgacaacatttttaagagaagatcggatacagctatggaaagctccgtataccacagaaacgcaagagacaggtcctgaactca
aagagctttcgcaaagatactctgaccggctgaaatacaatgtggaggacatcaccggcgctctggaggaaattcgctgttgcgcaatccagcgtggaac
tggaaaccaaacgtttaagacaaagggagtggccactctgcaagttttcctgccaaggaaacagaataagggctccagaaacttcattgagacttcccta
aatgttactggaaaggagctgaggagtcagatagcacaaacatatggatttcaagaagattacataaaaataatcattaacaagaaacagcttgaaatgg
acaaaatgctgcaggaacaaggcgtcagccacaacatcaaggtgcttgtcctcgagttgcagtacacagaggaggaggccaaaaagcgaacgcacgaaga
agaaaaagaaagagaaaatgcagagaaaagagacgagaatataaagaagaagatgatgcgcaccaagaagggtctggagatcttagctgagaggggtgaa
tcatatgactcagaaagagctccgtaccttgagatagccaatcaaacagganagccgctcaacattccctcagctgcaaaaaaggcgctgatgcttgcca
tgngctatcac
3' EST: CX839153 [+]caacaggtttattctcatggcaaatgccaccatatttccctgtgcccctagtgctgcagggaatacagataaacatacataaaacagtaaaacaccacaa
acactgcaaagaggagaaatcaaggcacttggggtaccagtaacctgctgctatgcccactctcagtacaacgatgtgctactgggcactgtgtatcatt
aaggcacctgtagggggcgccgagcaggagtgactaataaatagactgcccagtgttctcttgtctgacacgggcctacaacactatccatcagaccagc
ccaacagctggtactgtcccacaactcccagcattcaaagtgtttaacatactgggcgttgttgctgatgagatgcaggctggatattatatataaacat
atatacaaaggtctggaaataggatattacatttccagatatggggttgctctgtaatttggagcaccattgataaaaaccctataaaggtgtatttcat
agatttatgatgggttcattcccataaagaacactgtaaggcactgtaggaggaagagcaaatcagataaagaaggaaaaatgggttatttaaaggggaa
ctaactgtcaacggcagggagtaataaatctgtgcaagtcacatattctatttcttatagtatgtcacatggaaatgctttattactgcactcctcctgc
cttatgttggcagcctggcgctctaatccctgctggtatcagtttgccgggac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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