XB-CLONE-3299799
Clone Name: IMAGE:7661013
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Gene:
pcdhga11
,
pcdhga3
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC121475 [+]
GGCTTTTTCTTGTCAAAGGATCAACATAAAAACAGAAGATTCATGGCTTTTTAAAAGGATCTATATTCTTTTATATTTTAATAAAGGGATCTAAGATATG
GACTTCCAAAGCCCAGGAAAGGATTGGAAATGGCAAGTAGTATATTTCTATTTCCTTTATAGCTGGGGCTGGGTCTCTGGGCAGCTTCGATATTCTATTG
CAGAGGAGTCAGAGCCAGGAACGTTGGTAGGGAATGTGGCTCAGGATCTGGGGTTAAACATGGCAGATATTGAGAAACGCAGACTGAGTTTAAGATCTGG
TGCAAATGGCAGATATTTTTTTGTTGACCAGAAAACCGGAGCTTTGACTGTCAGAGATAGGATCGACAGAGAGAGCCTGTGTGGTTCCAGCTTAAGCTGT
TTATTGCCTTTGGAGCTAGGCATTGAAAAGCCTTTTGAACTGTTTAGTGTAGATATAGAAATATTAGATGTTAATGATAACTCCCCCTCTTTTTTGTCAG
ATAATCAGATTATTCAAATTATAGAGATATTTGCAAATCCAGGTGTTAGATTTCCTTTAGATACTGCTGAGGATTCAGATGTAGGAATCAATGGTATTAA
CCAGTACAAGATTAACCCAAACCCATTCTTTTCATTGTCTGTAAAGAATCTGAAGGATGGGACACTCATTGCAGAATTAGTACTTGAAAAAAAATTAGAT
CGAGAGGAAAAGGGGCAACATGAACTATTGCTTACTGCATTTGATGGGGGAGAACAACCAAGGTCTGGTTCTACCCTAATAACAATCATAGTTCTAGATG
TTAATGACAATGCCCCAGTGTTTGATCAGCCGAGTTATAAAATTACTTTACATGAAAATCTTCCATTAACAACAGTAGTAATGAAGCTTAATGCTACAGA
TCTGGATGAGGGAGTTAATGCAGAGATTAGTTATCTTTTTGATCATCACACATCAACTGCAGCAAAAGGAATATTTGGTTTAAATCCAAACACAGGGGAA
ATATATATTAAGGGATTTGTGGATTTTGAGAAGACACATTTTTATGAGTTATTTGTCAAAGCAGTAGATGGCGGCACTCCAAGACAAGAGGGACGCTGCC
TCATTCAAGTTGAAGTGGAGGATATAAATGATAATAGCCCAGAAATTATTTTTACCTCTAATGCCAATGAAGTGCCTGAAGATGCTCCCATAGGCACTGT
CGTTGGATTTATCACTGTGAGAGATAAAGACTCAGGAAAAAATGGAGATGTTCAGTTGGGTGTATCACCAGATTTACCTTTTAAAATTCAGCCCTTCAAA
AACAGATATTCATTGGTGACTAGTGAACATTTGGACAGAGAGAAGACCCCACAATATACTATTCAACTTACAGCTTCTGATTTAGGTTCTCCTGCTTTAA
GTAATCAGACTGTGATACTGCTAAATGTTTCAGATGTTAATGATAATCGCCCAGTCTTTTCTCAGTCTGTTTACAATGCTCATATAAAGGAAAACATTGA
ACCTGGTACTTTATTATGTACTGTCTCTGCCACTGATCCAGATGTTGGATCAAATTCTGATCTGACTTATTCAATAAGTGAAAGTCAAATTGATGGCTCT
TCTGTATCTTCATTTGTGTTCATCAATTCCAATACTGGGGATATTTATGCCCAGCGTTCTTTTGACTATGAACAATTTCAAGTTCTTACTATAACTGCCA
GAGTGGAAGATTCTGGATCTCCAAAATTATTTTCAAATGTGTCTGTGCACATATTTATTTTGGATACAAATGATAATGCTCCCTCGGTGCTGTATCCAGG
GGATTCAAAGGGATTTATAGCCCAAGAGAAGATTCCGCAATCTGCTTCTGCTGGTTATTTGGTTACCAAAATATCTGCAATAGATCCTGACTCAGGACAC
AATGCCTGGCTTAGCTACAGGGTGGTTGAACCCATAGGTCAAACTTTATTTGAGATTTCTCAGTATACAGGAGAAATAAGGATAATTCGGAGTTTCCTTG
AAATTGATAATACTGAGCAGCACCTTGTCATTTCAGTCAGTGACCACGGGGAACCAGCATTATCAGCAACTGTTACAGTGATTATAAATTCTGTTGAAAA
CATTGCCCAAGAGTTACCACATTCTCAGGACATGATACCACATTCTCAAACATCCCCAAATTTGACTTTGTATTTAATCATTTCACTGGTTGCCATAAGT
TTAGTTTCCCTTATTACTTTCCTTATCTTGCTTGTGAAATGCTTAAAAAGGGACAATTATGGAAGCAGCTGTGGATTTTGTTTTTCAAGCAAATTCCAGA
CCAACCATTACACAGACCAGTATAAACCAACTCTTTACCTGAACACAGACGGGACTTTAAAATACATGGAAGTGAGGATGGTTCCCCCAGAGTCACAAGG
GCAGTGTTATCAAGCTTGTTTCCCTTCTGCTTCTGAAAGAAACGATTTTATGACACCTATGGATATTCCCCAGCAGGCGCAACCTAACGCAGATTGGCGG
TTCTCCCAGGCTGCTCAGAAACCCGGACCCAGTGGGGCTCAGCCCACAGAGGAAGCTGGTGTGTGGCCAAATAACCAATTTGAAACAGAGAGACTTCAAG
CAATGATTTTGGCATCTGCAAACGAAGCTGCTGAGGGAACATCTGGCCTCGGAGGTGGAACAGGAACAATGGGACTCAGTGCCCGCTATGGACCTCAGTT
CACCCTGCAGCATGTCCCTGACTACAGACAGAATGTTTACATTCCAGGAAGCACACTGACTCCCACTAATGGAGCAGGAAAGCGGGAAGGAAAAGGAAAC
AAAAAGAAATCCAGCAAAAAGGATAAGAAGTAATCAGTGACTTTTACTTATTGGGCAGTAACCCCAGAAGAATTCCCCAAGCGAATTGGTAAAAGAGAAT
CTGAATGTCATCTTTGGGGAAACACAGTATAAGAATCAGTCATGTACGTTTCATCTGAGCTATTTGCAAAAATCTAGATAATTCTGCCTCTAGTTCTTAT
GGTACAGTATGTATTTCCACCTCTGGAACAAGTGCTCTGTCAATATTAGGCAACATTTTGTACCAGTGCAAGGTAATTTCATAGCTGATAATATGCACAC
TTTCTACAAACTGCTAAAAAGATGGTTTGTTCCACATTTCTATGTGGAACTTCTTCCATTGTAAATAATTTCAACAAAATAGCTATTTATAATTTATCCG
CAGAAACTGTCCAAACTTGGGTCCCTTCCTTTCCAAATTGCTATGATTTTTCCTTTTCAAGAATCCAAAATATCACTGGCAGTAAAGGAATATCTCTGAA
TGTAAAGCCGAGGTTTTGGGGACTGTTTAAAAAATCCATTGAAGGTCATGCTAATTTAGAAGCCAGGCAGTTCTCCAGCCAGTGATTCCTCTGACCTCAG
AATAAGTAACTATGAGAAAAAAAAAAAAAAA
5' EST: CX841761 [+]gctttttcttgtcaaaggatcaacataaaaacagaagattcatgggtttttaaaaggatctatattcttttatattttaataaagggatctaagatatgg
acttccaaagcccaggaaaggattggaaatggcaagtagtatatttctatttcctttatagctggggctgggtctctgggcagcttcgatattctattgc
agaggagtcagagccaggaacgttggtagggaatgtggctcaggatctggggttaaacatggcagatattgagaaacgcagactgagtttaagatctggt
gcaaatggcagatatttttttgttgaccagaaaaccggagctttgactgtcagagataggatcgacagagagagcctgtgtggttccagcttaagctgtt
tattgcctttggagctaggcattgaaaagccttttgaactgtttagtgtagatatagaaatattagatgttaatgataactccccctcttttttgtcaga
taatcagattattcaaattatagagatatttgcaaatccaggtgttagatttcctttagatactgctgaggattcagatgtaggaatcaatggtattaac
cagtacaagattaacccaaacccattcttttcattgtctgtaaagaatctgaaggatgggacactcattgcagaattagtacttgaaaaaaaattagatc
gagaggaaaaggggcaacatgaactattgcttactgcatttgatgggggagaacaacaaggtctggttctaccctaatacaatcatagttctagatgtta
atgacaatgcccccagtgtttgatcag
3' EST: CX841760 [+]tttttttttttttttctcatagttacttattctgaggtcagaggaatcactggctggagaactgcctggcttctaaattagcatgaccttcaatggattt
tttaaacagtccccaaaacctcggctttacattcagagatattcctttactgccagtgatattttggattcttgaaaaggaaaaatcatagcaatttgga
aaggaagggacccaagtttggacagtttctgcggataaattataaatagctattttgttgaaattatttacaatggaagaagttccacatagaaatgtgg
aacaaaccatctttttagcagtttgtagaaagtgtgcatattatcagctatgaaattaccttgcactggtacaaaatgttgcctaatattgacagagcac
ttgttccagaggtggaaatacatactgtaccataagaactagaggcagaattatctagatttttgcaaatagctcagatgaaacgtacatgactgattct
tatactgtgtttccccaaagatgacattcagattctcttttaccaattcgcttggggaattcttctggggttactgcccaataagtaaaagtcactgatt
acttcttatcctttttgctggatttctttttgtttccttttccttcccgctttcctgctccattagtgggagtcagtgtgcttcctggaatgtaaacatt
ctgtctgtagtcagggacatgctgcagggtgaactgaggtccatagcgggcactgagtcccattgttcctgt
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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