XB-CLONE-3298765
Clone Name: IMAGE:7661578
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Gene:
dtx1
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC154721 [+]
GAGAAACAGCATCCTTACCTGGACCTCACAACCCTTGGTTTCTGTTATTTGGTTCATTTCCATAGCATGTGCCAAGTCAACCGCCAGACCCACCGTAAGC
GCAGGCTAAGGAGACGTATGGACCTGGCATATCCACTCACCATGGGTTCCATACCAAAGTCCCAGTCTTGGCCTGTGGGATCTGGCTCAGGATTGCCCTG
CTCATGTCCTCAGTGCCTCCTTGTTAACAGCACTAGAGCAGCCTCCAATGCCATATTGGCATCTCAGAGGATCAAAGTTCCACCTGGTCCTCCACCTGCC
TTGCCTCCTCCACCCCCTCCCTCCATACATCCGCCTGGCTTGAGACAAAGCAATACCTACAGTGGAGGAGCAGCAGGCTGGGGAAGAACAGGAGAAGGAG
TGCGATCTACAGGAGGTATCAGAAATGGCTCTGGATTCTCCCGCAGTCAGAGTGTGCCAGGTGCAGCGCCATATCCAGGACAAAACAACCTTAACAGGCC
AGGAGAACAGAGAACTAGTGGGAGCAGCAGCAGAGCATCTATTCCACCAGGCGTTCCTGCTCTCCCTGTGAAGAACCTTAATGGTTCGGGTCCTGTACAC
CCAGCATTGGCAGGAATGACTGGTATTTTAATGTGTGCAGCTGGATTACCTGTCTGCCTGACAAGAGCCCCCAAACCTATTCTGCACCCTCCTCCTGTCA
GCAAAGAGGACATCAAACCTGTTAGTGGCATTAGTGGCATCTGTCGGAAAACTAAGAAGAAACACTTGAAAAAGAGTAAGAACCCAGAAGAGGTGGTGCG
CAGATACATACAGAAAGTAAAGTCTCCTCCCGATGAGGATTGCACCATTTGCATGGAACGTCTGGTCACTGCATCAGGTTATGATGGTGTTCTCAGTCAT
AGAGGCATTCGTGGTGAGCTGGTTGGAAAGCTTGGAAAGTGTAACCACATGTACCATGTGCTGTGCCTGGTGGCCATGTATAACAATGGGAATAAGGATG
GTAGCTTGCAGTGTCCAACTTGTAAAGCAATTTATGGAGAGAAGACAGGCACACAACCTCCAGGGAAGATGGAATTCCATGTCATCCCACACTCTCTGCC
TGGTTACCCAGACTGTAAAACCATACGCATCGTATATGATATCCCAAGCGGCATGCAGGGGCCTGAACATCCTAACCCTGGCAAGAAGTTTACAGCCAGA
GGATTTCCACGACACTGCTATCTACCAGATAATGATAAGGGGAGAAAGGTATTGCGACTCCTACTGGCAGCTTGGGAACGGCGCTTGATATTTGCCATTG
GTACCTCAAGCACGACAGGGGAATCCAACACAGTTGTGTGGAATGAGATTCACCACAAGACGGAATTTGGGTCCAACCTGACAGGCCATGGTTACCCAGA
TCCCAACTATTTGGACAATGTTTTGGCTGAACTTCATCGTCAGGGCGTCATGGAGGAGAGATGCCTCCCATACTGATGATGGCACTGGCAGTTACATAGC
TGTGCATATAAAAGCCAGCAGGTGCATACCATTGCCCATCTGCAGGAGGGTGATTTTCTGCACACCAGAAAAATCCAGTTTTTTTCAGGTGCTGCAGTTC
TGGAGAAACCTTTGTCACTAAAGGACAAAATTCAGAGAATCATCACAATATGATGCAGAACATCACATAAACCAAGTGGGGTGTGAAGACAATGTCAAGA
TGGCCTAAAATCAGACACTGGCAGAGCATATGCACTTGTCCACAGTACACAGTGCTGCTAAGGAGGAAAGCAGATGGCACACAGACAAAGGACTCAAGCC
AACTGGCGCAGTGAGGAAGAGGGTTCTACAACAGAACATTCCGAGGGGTGAAAAATGAATGAGTCCCATAATTATATATTTAAAAAGCGGGTGCTAAGAA
CATCCAGTGTTGGTTTTCATCACAATTGTCTCCAGCCAGGAAGTAATATTTTGGTCCTTGCATCTAAGCTTCCTCCCACTTTAAAGCCCAGGCCCAGTAA
AGCTCCTTCTGTCCTGCTGTCTGCATGATCTGAGAATATGTTTGATGAATCTGTGTTGAAAAGGACACTAAGCTTCAGAGGAGTATGTATAGCCACAGGA
CTGCTGTTCTGACCACTATATATAAAATACAGAGTGTTAGAAATGAGCAATAAGGCATTCATTTTAAACCCTTCCCCAAGATCTGCACAAGGTTGTGAGC
AATGCATATTAAAGGAACAGTAATGCTTAGATATGTTGCTCCGATATGACACATAATGCTATATATATATTTCTATATGTAAATGCAAAAGGCTCTGAAA
CCTGTTATTTGAAGTCCTGCATGCCCATTCCTGAAGCACTGGGAGAAACGGGGTTTCCTGCAGCTAAGGCAGTGTTTGAGTTCACTTTATAGAATGTTAC
TTGTGGTTTGGCATTCCATGTGGCATAAATGCAAGTTGATCTGTTTTTAAAGAAATGTTGTGTTTCTTGTGTGTTAAAAGAGCAGTTTGTAACAATCACA
CTGATGGCTCTGCAGATGTTGGAGAACAACTCCCACCATCCCACCAACGGCCGAAGGACAACTGTGGTTTGTCCATGCTTGCTACAGACTATTTTATGTA
TCTTTTGTTCTGCTATGTTTGGAAACTTTTAACTATATGTTTCATTTGTACAACAAGACCGTTAATATAAACATATATCAATTTGAAGCTTTACTGTTCC
ATTAATGTGCAAAACTGCTAAGCTTTGTGGTCCCTAACAAAGTCTTTTCAGAAAATATTCCAAAAATATCTTAAGGGTTCTCTTGCCAACCCAGGCATTA
AATACTTTAAATCATTAAAAAAAAAAAAAAA
5' EST: CX843436 [+]aaacagcatccttacctggacctcacaacccttggtttctgttatttggttcatttccatagcatgtgccaagtcaaccgccagacccaccgtaagcgca
ggctaaggagacgtatggacctggcatatccactcaccatgggttccataccaaagtcccagtcttggcctgtgggatctggctcaggattgccctgctc
atgtcctcagtgcctccttgttaacagcactagagcagcctccaatgccatattggcatctcagaggatcaaagttccacctggtcctccacctgccttg
cctcctccaccccctccctccatacatccgcctggcttgagacaaagcaatacctacagtggaggagcagcaggctggggaagaacaggagaaggagtgc
gatctacaggaggtatcagaaatggctctggattctcccgcagtcagagtgtgccaggtgcagcgccatatccaggacaaaacaaccttaacaggccagg
agaacagagaactagtgggagcagcagcagagcatctattccaccaggcgttcctgctctccctgtgaagaaccttaatggttcgggtcctgtacaccca
gcattggcaggaatgactggtattttaatgtgtgcagctggattacctgtctgcctgacaagagcccccaaacctattctgcaccctcctcctgtcagca
aagaggacatcaaacctgttagtggcattagtggcatctgtcggaaaactaagaagaaacacttgaaaaagagtaagaacccagaagaggtggtgcgcag
atacatacagaaagtaaagtctcctcccgatgaggattgcaccatttgcatggaacgtctggtcactgcatcangttatgatggtgttctcagtcataga
ggc
3' EST: CX843435 [+]tttttttttttttttaatgatttaaagtatttaatgcctgggttggcaagagaacccttaagatatttttggaatattttctgaaaagactttgttaggg
accacaaagcttagcagttttgcacattaatggaacagtaaagcttcaaattgatatatgtttatattaacggtcttgttgtacaaatgaaacatatagt
taaaagtttccaaacatagcagaacaaaagatacataaaatagtctgtagcaagcatggacaaaccacagttgtccttcggccgttggtgggatggtggg
agttgttctccaacatctgcagagccatcagtgtgattgttacaaactgctcttttaacacacaagaaacacaacatttctttaaaaacagatcaacttg
catttatgccacatggaatgccaaaccacaagtaacattctataaagtgaactcaaacactgccttagctgcaggaaaccccgtttctcccagtgcttca
ggaatgggcatgcaggacttcaaataacaggtttcagagccttttgcatttacatatagaaatatatatatagcattatgtgtcatatcggagcaacata
tctaagcattactgttcctttaatatgcattgctcacaaccttgtgcagatcttggggaagggtttaaaatgaatgccttattgctcatttctaacactc
tgtattttatatatagtggtcagaacagcagtcctgtggctatacatactcctctgaagcttagtgtccttttcaacacagattcatcaaacatattctc
agatcatgcagacagcaggacagaaggagctttactgggcctgggcttttaagtgggaggaagcttagatgcaagga
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: