XB-CLONE-3258091
Clone Name: IMAGE:7685974
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Gene:
scaf8
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC122929 [+]
CCCAAACAACACGGCGTTTCTACATTAGCCGACAACATGGAGGCCGTCAAAACCTTTAACAGCGAGCTATATTCACTGAATGACTACAGGCCACCTATTT
CTAAAGCCAAAATGACCCAGATAACTAAGGCTGCTATCAAAGCTATTAAGTTTTACAAGCATGTTGTTCAAAGTGTTGAGAAATTCATCCAGAAGTGCAA
GCCAGAATATAAGGTTCCTGGACTATATGTCATTGATTCAATTGTCCGTCAATCCAGACATCAGTTTGGTCAAGATAAGGATCTTTTTGCACCCCGGTTT
AGCAATAACATAATTAATACTTTCCAGAATCTGTACCGTTGTCCTGCAGATGACAAGAGCAAAATTGTAAGAGTTCTGAATCTCTGGCAGAAGAATAATG
TGTTTAAGAGTGAAATTATTCAGCCACTTCTTGATATGGCTGCTGGTATCCCTCCTCCAGTTGTCACTCCGGTGTTACCCAGTACTACTGCTGCAGTGAG
CAACACTCCAGGAACACCAGTAACCCCAGTTACACCAGCAAATATTGTTCAGGGAATACCTGATCCGTGGATTGCACAGATAAACAATACAGATACCCTT
GCTGCTGTGGCACAGATTCTGCAAAGCCCTCAAGGGCAACAGCTTCAACAGCTTGTACAGTCTTTGCACATCCAACAGCAGAAGCCTCAGCCTTCTCTCC
TACAAGCACTAGATGCTGGCCTTGTAGTTCAATTGCAGGCACTTACAGCTCAACTTACAGCAGCAGCTGCTTCTACTAATCCTCTCAACCAATTAGAACA
AAGTGTTTCACTCAGCAAGAAATTAATGGATAGGTTTGATTTTGGAGATGACTCGAACCAGCAAGAAGATCCAAAAAAGGAGACCCAACAAATCCCTCTG
ATTCCAGAATCTGTGAATAACTCAATTTTCCATCAACTTGCGGAACATTTGCAGCAACAAAATCTTGAGCATCTTCGACAGCAATTACTGGAACAGCAAC
ATTCTACAAAGGTAACAGCTCAGGAAACTCAGGACTTTATGTCTGAATCAGAAAATTCTGCAACACCTTCACAGGATGACAGTCAACAGCCATTTCTGGA
GTCTGAATCCCAAATGCATGCCTCCATGAACATGCAACAAGAAGATATGGACATTGAGGAAACGCTAGATGGAAATGAAGAGATATTTGAAAAAGAGGAA
AAGAAAGTAATGAAAGAAGAAGCACCTAGGACACGTTCAAAGTCTCACTCAAGGTCACCAAGGAAAAGACGATCACGATCACGGTCTGGCTCCAGGAAGC
GCAAACACAGAAAACGCTCACGTTCGCGGTCAAGAGAAAGAAAACGCAAAACATCCCGCTCATATTCAAGTGAAAGAAGAGCAAGAGAGCGAGAGAAGGA
ACGGCAGAAAAAAAGGCCTCCCTCCTATCAGATCCAAAACACTTAGTGTTTGCAGCACCACGCTTTGGGTTGGTCAAGTTGACAAAAAAGCCACACAGCA
GGATTTGACCAATGTATTTGAAGAGTTTGGACAGATTGAATCAATAAATATGATTCCACCAAGGGGCTGCGCATATGTCTGCATGGTTCATAGACAAGAT
TCCTACCGGGCTCTTCAGAAGCTTAGTTCTAGCTCATGTAAGATTGGATCCAAAATCATCAAGATTGCTTGGGCTTTGAACAAAGGTGTGAAAACAGAAT
ATAAGCAATTCTGGGATGTTGATCTTGGAGTAACATATATACCATGGGAAAAAGTCAAAGTTGATGACTTAGAAGGATTTGCTGAAGGTGGAATGATTGA
TCAGGAGAGTGTGAATAATGACTGGAAAGCGCAGAAAAGTTCTGAAGCAGTTGGTGCTAAAGAGTCCACACCTGATAATGCAACAGTAGTCCCTACTACC
ATTGTCACCTCTGCTCCCATTCCAGTTGTCACTACAGCTGCCCAGGCTTCAGCTGTTCAGAAGAATTCTACAGTAACCTCACAGCCTGAGGCATATACTC
AGCCTGTTGCAGTGCTTCAGATACCAGTTGCTCCAGCTGTAAGCCTAGTTCCGCCAGCATTTCCTGTCTCAATGACTGTACCTCCACCAGGCTATTCTGC
AATTCCACCACCTCCTTTCATGAGGGCTTCTTTTAATCCTTCGCAGCCACCACCAGGTTTTATCCCACCTCCTCTTCCTCCACCTGCCATTCCTCCTCCA
GCTATTAGCTCTGCACTTCCAGCAGCTACTCAAAGTACAGTGAACAGCAACACTGGAATATTAGGTGTGCAACCACCATCATCAGTTACAGCAAACTTGC
CTCATGTAAACATCACTACTCGAATGACGGGTATGCCTTTGTTAGATGTTCGCCAAGGCTTGCTTTCACAGACTGCATCAACAAGGTTCACTTTGTTACA
TCCAGGAATACCTCCACTCCCACCACCACCAAGAAGCATGCTCCCTCCAGGACTGATTGACCCAAATATTCATCCATTGCCTTTCCCTCTAGGGGATATG
GTGTCTCTTTCTGACAGATCTTTTGGAGTCCAAGGCAGATTAGATGCCGATACTGTTAATGTAAAAGAAAAGAGGCAGCCTTTGCCAAACAGTAATATTC
AGGAGGGAGATCAAGATTATCGTTTTCCTCCAGTTGAAAGTCGCCAAAATACATGTAAACCATCTACGGAAAAACATGAAAGCGAGGCAATCTCAAGTGC
AGGCAACAAAGAAATGCAAGGAGTAAGAGGTACAGATGAAAGTGTTCAAGCAAGAAATGCAGATGATGACCATGAGCCACAGGACATGGCTGTTGTAGAT
CCTTCTGAAAGTCAAGAAAAATCTATGGATGAGACTGGTGTAGCTCATTTATCAAGTGAGGAGTTACATGGGGATGAAAGAAAGCCTGATACAGATGCCT
TTGAAGGTTTAAGACGGCCTGTCCAACAAGGATATGACAATAAGGGAACAAATATTCTAGATGCTCATGAAGGCCAAGTAAGACAACCACTAGATGACAA
ACAACATTTTAGAGGCCCAGCAATAGACATGTTAGCACCATTTCAAAGGTATCCAGGAGAGATTTTTCCTCGCCCAGCTTTAGGGAGAAGGGATCACTTT
GGAATGCCGTATTTAGAGACACATGATCGTTTTGGCAGGCCATCTATGGAGAGTCCTTTTAGACCACCTCTTTTAGATGGCAGAAACCATTATGGGAGGC
CACCAATGGATGGTAGAGAGCATTTTGGAAGACCACCTCCAGATATAAGAGAAAATCATGGAAGAACATTTGTGGATAGTGCTGGGAAGCAATTACATTT
CCCAGCAGAAAAGCCATGGGGACATCAAGAAGATTTTGATGAAAGACCCCACCCTTCTTTCATTGGTTTTCAAGGACTAAAGGGCTTTCATGATGAAAGG
CATCATCATGGAAACTTTAGACAGGAGCATCGAAATACTCCAAACTGGAACAGAGGGTTTGAACAAGCTAAACATAGGGATTTTGATGACCGTCGTCACT
CATGGGAAAGACAGGTTGATAGGGATGAAAGAGATTTTGATTTCCGTAGAGAAGTTAATGGTGACCCTTTTGGAAGAGAGAGACAGTCCGAAAACTGGGC
ACCTCCACAGCCTCAGCCACATGCTTTTGAGTATTTCCCAGAGGCCACTTCTGCTCAGAACAGTAGCGACCCTCAAGTTAATGGAGAAAAAACAGAGACT
AGCAATCAAAAAGAAACTGTAAGCAAATCTGATGATCTTGAACTCTGTGAACAGAAAGAGACTTCAGTTAAAGAGAGCGAAGAGAATGACACCAAGAAAA
CTGAGACAGAAAGTCAAATTGTGGTTGAAAGCACAGAGACTGAAGGGACATAATCATCACTCAGTAGCTGGTAATGAGCATCCTGAAATGTTTGGAGGTT
GAGAGACAAAGAAGTGAGGCTGCAGTGTCATGTGACGTGAACTTACATTTCCAGTTGACTGACAATATAGTGTGCAGGACTTGTATAGTGTACAGAACTC
CTTACCAGAAGGCACAAGTTTGAGTGGCAGAGGAAGAAGGCTGGCAGTGAAGAGCCAATGGTGATTGGAAAAGACACTGACTGAGGAAAAGAGACAGGAG
GACCAGAGCCCAGCCCGGAAAGCAGGAGGTAGCCACTGCAGTCAGCAGAGTATTGTTCCAAAGGAGATCAGTTGTCAACCGCTAGAAAAGGCTAGAAATT
AGGAAAAGGGTAAGTCTCAGGATTAGAGTCACCAATATAAAAAGAACTGGAAGAATTCATTGGCCTGAAAGTGGTAGAAGGGATTCATCAGCACACGGAC
ACTGATCTAGAAGATGTTTGAAACTCGTTATGAAACAACATGCTTCAGGATCAAATGCACTTGCATATTCCTTTGAATGGACCCCTGCAATAGACTGTAG
AGTCCAAAGGAGACGTTTAGGACAGTTTGCAAGAACTCCTGGATACTCCTGGTATAGTCATGAAACCTCTGACCAAAATACAGAATTCTTACATTTAGCC
AAGTCTGACTTGAAAGTTGAAAAAAAGGAAAGATTACATTGGAAAGATTAAATAGACTGATGGATGTTTGGAGGGAAACTTCACAGCAAACTGTATCAGC
ATATTCTTATTCTAATGAATATTATTCAAATGTTTTTAAATCTAATTTTATTCTTATTTTTTGTACATTTCACTAGATTTTTCAATTTCTAAATGTATAA
TTTGCTTTATATCTTTCTATTCTGAATTTATTGTACTTTGTAAAACAAAAGGTCTGCATTTGATTGTTCCTACTTTCAAATGGTGATGATGTTAAAAATA
TAGAACTTTGACCTTTTGTTGTTATGGTGAAGATCTGTGTTTCTAGTGGAAGTTGATTATACCTTGAAAATAACCTGATTTTAAACACATTACTAAAGGG
AATTATATATATATATATATATATATATATTTATATTTTATTTAAATTAAATGTATTTTCCCAAATTAATGAATCTGGCTAAAAAAAAAATGCCCTCAGG
CCTACTTCATATTCTGAAACTGAGCAGCAGGTGGCGCTGTTGTAGCAAAATGCATTCATAGTAACAGTACTTTAACCCTTTATATCTTGTAATAAAATAA
ATAATAAATGTAAATTGCAAAAGCAAAAAAAAAAAAAAA
5' EST: CX906053 [+]cccaaacaacacggcgtttctacattagccgacaacatggaggccgtcaaaacctttaacagcgagctatattcactgaatgactacaggccacctattt
ctaaagccaaaatgacccagataactaaggctgctatcaaagctattaagttttacaagcatgttgttcaaagtgttgagaaattcatccagaagtgcaa
gccagaatataaggttcctggactatatgtcattgattcaattgtccgtcaatccagacatcagtttggtcaagataaggatctttttgcaccccggttt
agcaataacataattaatactttccagaatctgtaccgttgtcctgcagatgacaagagcaaaattgtaagagttctgaatctctggcagaagaataatg
tgtttaagagtgaaattattcagccacttcttgatatggctgctggtatccctcctccagttgtcactccggtgttacccagtactactgctgcagtgag
caacactccaggaacaccagtaaccccagttacaccagcaaatattgttcagggaatacctgatccgtggattgcacagataaacaatacagataccctt
gctgctgtggcacagattctgcaaagccctcaagggcaacagcttcaacagcttgtacagtctttgcacatccaacagcagaagcctcagccttctctcc
tacaagcactagatgctggccttgtagttcaattgcaggcacttacagctcaacttacagcagcagctgcttctactaatcctctc
3' EST: CX906052 [+]gcaatttacatttattatttattttattacaagatataaagggttaaagtactgttactatgaatgcattttgctacaacagcgccacctgctgctcagt
ttcagaatatgaagtaggcctgagggcattttttttttagccagattcattaatttgggaaaatacatttaatttaaataaaatataaatatatatatat
atatatatatatataattccctttagtaatgtgtttaaaatcaggttattttcaaggtataatcaacttccactagaaacacagatcttcaccataacaa
caaaaggtcaaagttctatatttttaacatcatcaccatttgaaagtaggaacaatcaaatgcagaccttttgttttacaaagtacaataaattcagaat
agaaagatataaagcaaattatacatttagaaattgaaaaatctagtgaaatgtacaaaaaataagaataaaattagatttaaaaacatttgaataatat
tcattagaataagaatatgctgatacagtttgctgtgaagtttccctccaaacatccatcagtctatttaatctttccaatgtaatctttcctttttttc
aactttcaagtcagacttggctaaatgtaagaattctgtattttggtcagaggtttcatgactataccaggagtatccaggagttcttgcaaactgtcct
aaacgtctcctttggactctacagtctattgcaggggtccattcaaaggaatatgcaagtgcatttgatcctgaagcatgttgtttcataacgagtttca
aacatcttctagatcagtgt
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 0.5-1.5 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe4 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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