XB-CLONE-3252317
Clone Name: IMAGE:7691231
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Gene:
sec23a
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC123946 [+]
AGCGGAGAGTAAGAGGACAGGGGTGTCTTGCGATGACCACCTTTCTGGAATTTATTCAGCAAAATGAAGACAGAGATGGGGTTCGCTTCAGCTGGAATGT
GTGGCCATCAAGCCGCCTGGAAGCCACAAGGATGGTGGTTCCTGTAGCTGCTCTCTTGACACCGCTAAAAGAGCGACCAGACTTGCCCCCTATACAGTAT
GAACCTGTTTTGTGCAGCAGGACTACATGCAGAGCTGTACTCAATCCTTTATGTCAAGTGGATTATCGAGCAAAACTTTGGGCATGCAACTTCTGTTACC
AACGAAATCAGTTTCCCCCTACATATGCAGGCATCTCAGAAATGAATCAACCTGCAGAGCTTCTGCCTCAGTTTTCTAGTATTGAGTATGTGGTTCAGCG
TGGACCTCAGATGCCACTGATCTTTCTGTATGTTGTGGACACTTGCATGGAAGATGAAGATCTTCAAGCTCTTAAGGAGTCCATGCAAATGTCCCTCAGT
CTGCTGCCTCCTACAGCACTCGTGGGGCTGATAACATTTGGACGGATGGTTCACGTACATGAACTGGGATGTGAAGGCATCTCGAAGAGCTATGTTTTTA
GAGGAAATAAAGACCTTACTGGAAAGCAAATCCAGGAAATGTTATCTCTTACAAAATCTCCAGCAGCCCAACAAGGCCGTGGGCCACAAGTTCAACAACC
CCCTCCATCCAACAGATTTTTACAACCAGTGCAGAACATCGACATGAATCTCACTGACCTTCTAGGAGAGCTGCAAAGGGATCCATGGCCAGTTCCTCAA
GGCAAGAGGCCTCTCAGATCATCTGGAGCTGCCCTCTCCATAGCAGTTGGACTTCTTGAGTGCACATTCCCCAACACTGGCGCACGCATAATGATGTTTA
TCGGGGGGCCAGCCACTCAGGGTCCAGGGATGGTGGTGGGTGATGAGCTAAAGACCCCTATCCGTTCATGGCATGATATTGAAAAGGACAATGCCAAGTA
CGTCAAAAAGGCAACCAAACATTATGAAGCCCTTGCACACCGTGCTGCTGCCTCTGGCCACGTCATTGATATTTATGCCTGTGCATTGGATCAGACTGGG
CTGCTGGAAATGAAATGCTGTCCGAACAATACAGGAGGATACATGGTGATGGGTGATTCCTTTAATACATCTCTCTTCAAACAAACCTTCCAAAGAGTTT
TTACCAAAGATGCACAGAGCAATTTCAAGATGGCATTTGGTGGAACCCTAGAAATCAAGACTTCAAGAGAGTTAAAGATATCTGGTGCCATCGGGCCATG
TGTATCCCTGAATGCCAAAGGCCCATGTGTGTCTGAAAATGAGATTGGTACAGGCGGCACCTGCCAGTGGAAAATCTGTGGCATTAACCCTTTCACGACA
CTGGCAGTTTACTTTGAAGTTGTCAATCAGCACAATGCTCCAATTCCCCAGGGTGGTCGTGGGGCAATCCAGTTTGTCACACAGTATCAGCACTCCAGTG
GCCAGAGAAGGATCCGTGTAACCACAATCGCCAGAAACTGGGCTGATGCTCAGACACAGATCCAAAACATTGCAGCTTCATTTGATCAAGAGGCAGCAGC
TATACTTATGGCTAGGCTTGCTGTGTACAGGGCAGAGACAGAGGAAGGTCCTGATGTCTTGCGATGGCTGGACAGGCAGCTCATTCGATTGTGTCAAAAG
TTTGGAGAATACCACAAAGATGACCCCGTCTCTTTCAAATTTTCTGAGACTTTCTCTCTCTACCCACAGTTTATGTTCCACTTGAGGAGATCTCCATTCC
TTCAGGTGTTTAATAATAGTCCAGATGAGAGCTCCTATTACAGGCATCACTTCATGCGGCAAGACCTCACTCAGTCCCTAATAATGGTTCAGCCCATCCT
GTATGCCTATTCCTTTAACGGACCCCCAGAGCCCGTGTTGCTTGACAGTAGCAGCATTCTTCCAGATAGGATTCTTCTGATGGACACTTTTTTCCAAATT
CTGATCTATCTTGGAGAGACTATAGCACAGTGGAAGAAAGCAGGCTACCAAGACATGCCAGAATATGAAAACTTCCGACACCTGCTTCAAGCTCCTGTTG
ACGATGGGCAGGAGATCCTTCAGTCCCGTTTCCCCATGCCACGATACATAGACACAGAACATGGAGGAAGTCAGGCTCGCTTCCTGCTATCTAAAGTCAA
CCCGTCCCAGACTCATAACAACATGTACGGCTGGGGGCAGGAATCCGGAGCTCCCATTCTCACCGATGATGTCAGCCTGCAGGTTTTTATGGATCATCTA
AAGAAACTAGCCGTGTCCAGTGCTGCCTAAAAGCAACCCTATCTGTTCCGCCTTGGAGATGTTCATAGCCCTACCCACCTCTCACTACATAAGGGCTTGT
GGTACAGACTGCTCCTTCTCCCCAAATTTCTTTTGTCCGTAGCTTTACAATCCATGTGCGTATGCTGCCTTGACCCTGCTTTCGACAATAGCTCTTTGGT
AGATGTATGACAACAACTTAGATTCTGTGTGAGCAAAAAGAACAAAACTTTATCATTCTGAGTCTTCTATATTAATGTCAAGCACTGATGAATATAAGTG
AAATTTTTAATTAGGTATAGTATGTAAAGGCCTCATTGTGTGCTAACAGACACAGACATGTAGTCCTTTGAGTTGTGCAATAGTTAGGGGTGGAGACCCA
CATGCTGCCTAAAAGTGGCCATACACGGGCAGATTTCATCTGCCGATTCAGGTCCTTCAGACTGATTTCAGTAGCTGATCTGCCCCAGTATAGGGCCCTC
AGACAGGCTTCCCTGATGAAATCTGGCCAAAAATCATCCAGATGTCAATTGGGCAGGCTTAATTTTCCTGTCGGATCAAGGACCGCATCAGCTCTTTGAT
GCTGTCCTCGCTTCAGTTTCTTAAATCACCTTCATTGTCATTAGCACTATATCGTCCACCCAAGGTGGGGCACATCAGGGGAAAGTTTCACTCGTTTGGC
AACATGGCCAAATGAGCAAATCATACCGTGTATGGCCACCTTCACCCTTCTTTGAGCTGCTTTGTCTTGAAGATTTCATTTTTAGCATCATATTTAAGGC
TTAATACACAGACTTTCCGTAGTCACAGAGTCTTGTTTCAGTTCACTTGTCCCTATTTTTAGCTCTAATTTAAGTCTTAGTTAATTGTTCTGTTGCTGAC
TAATGTTAAAAGGCAATCAGACATATTCCGTTCAGTATTCTTGGTTTTATTTCTGGTTTACTTATTTGTTTTGCTTATAATGTTTGGTTCTTTTATCAGC
TAGTTTTATACTCTCACAATATTTCACACCTAAATTTAAAAGCTGGCATGGGAATCTAATACTCAGAGTTCAATTCTTGGATGCCGTTTCAAAAGTGTTT
TGTTTGTTGGTACAAAGAAAAGCATAACTGTTTACATTTCCTTTAAAATATTTGCTTGAATTATGCTGCCTTGGGATAAGTGTAACTTTGGAGTCAAATA
TATTGTGCAAGAGAAAAAGAACTAGGGATGCACCAAATGCTGGATTAGTTTGGGGTCCAACCAAATTCTAGCACTTTGTACTGGATTTAAATTGGGCTCA
TCCAAATCCAAGTCATGTGACTTTAAAGCACTATACAACTGAAAGCAATAATTTTTGTTGCTGAAAATTTATGGATTTTTAACATTTAAATAAGGTTCAG
ATTTGGTTCAGTATTTGGCCAAATTCAAAAATGATGGATTATGCTATTGCTTGGAGCACAGCTCAACAACACTGGCTAAGCTGATCAATGGTAGAGTTGC
TTGAGGAAACAGTAGGGTGTCCTATAAACCCACAGCTGTTTGAGATCTCATATTCCATAACACGCTTGACCTCTGCGTTACCAGTCCAAATAAACTCAGT
GACATTTAAAAAAAAAAAAAAA
5' EST: CX916164 [+]agcggagagtaagaggacaggggtgtcttgcgatgaccacctttctggaatttattcagcaaaatgaagacagagatggggttcgcttcagctggaatgt
gtggccatcaagccgcctggaagccacaaggatggtggttcctgtagctgctctcttgacaccgctaaaagagcgaccagacttgccccctatacagtat
gaacctgttttgtgcagcaggactacatgcagagctgtactcaatcctttatgtcaagtggattatcgagcaaaactttgggcatgcaacttctgttacc
aacgaaatcagtttccccctacatatgcaggcatctcagaaatgaatcaacctgcagagcttctgcctcagttttctagtattgagtatgtggttcagcg
tggacctcagatgccactgatctttctgtatgttgtggacacttgcatggaagatgaagatcttcaagctcttaaggagtccatgcaaatgtccctcagt
ctgctgcctcctacagcactcgtggggctgataacatttggacggatggttcacgtacatgaactgggatgtgaaggcatctcgaagagctatgttttta
gaggaaataaagaccttactggaaagcaaatccaggaaatgttatctcttacaaaatctccagcagcccaacaaggccgtgggccacaagttcaacaacc
ccctccatccaacagatttttacaaccagtgcagaacatcgacatgaatctcactgaccttctaggagagctgcaaagggatccatggccagttcctcag
gcaagaggcctctcagatcatctggagctgccctctccatagcagttggacttcttgagtgcacattccccc
3' EST: CX916163 [+]tttttttttttttttaaatgtcactgagtttatttggactggtaacgcagaggtcaagcgtgttatggaatatgagatctcaaacagctgtgggtttata
ggacaccctactgtttcctcaagcaactctaccattgatcagcttagccagtgttgttgagctgtgctccaagcaatagcataatccatcatttttgaat
ttggccaaatactgaaccaaatctgaaccttatttaaatgttaaaaatccataaattttcagcaacaaaaattattgctttcagttgtatagtgctttaa
agtcacatgacttggatttggatgagcccaatttaaatccagtacaaagtgctagaatttggttggaccccaaactaatccagcatttggtgcatcccta
gttctttttctcttgcacaatatatttgactccaaagttacacttatcccaaggcagcataattcaagcaaatattttaaaggaaatgtaaacagttatg
cttttctttgtaccaacaaacaaaacacttttgaaacggcatccaagaattgaactctgagtattagattcccatgccagcttttaaatttaggtgtgaa
atattgtgagagtataaaactagctgataaaagaaccaaacattataagcaaaacaaataagtaaaccagaaataaaaccaagaatactgaacggaatat
gtctgattgccttttaacattagtcagcaacagaacaattaactaagacttaaattagagctaaaaatagggaccagtgaactgaaacaagactctgtga
ctacggaaagtctgtgt
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe3 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
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