XB-CLONE-3252043
Clone Name: IMAGE:7691336
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Gene:
sh3kbp1
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC166366
[+]
gaaaggacgaggcggcggagatgtcaggtcgcctttagttacctgccccagaatgaggatgaacttgaacttaaagttggagaaatcattgaagttcttg
gtgaagtggaggagggctggtgggaaggtgtccttaatgggaagaccggcatgtttccttccaatttcatcagggagattgtaactgaaacagaaatcgg
taattttgagcaacagataaaaacagcatttaaagatactactggctcagaaagtgatggcggtgattccaagttagaaggaaccaatggaacaagtggg
ggggaaacccagtcgaaaaggatcaggggattcggctttggggatattttcaaagataaaccaattaaactcagaccaaggtcaatagaaatggaaagtg
aaattgtgccaatagaaaaggcaatgggaaagaaaatgccacccactgtgacttcacaggagccgatgaaaatagagacagagagcaaaacaaaacccag
ggagtactgtaaggtcctattcccatatgaagctatgaatgaagatgaactgacaatcagagacggtgatattgttactgtattaagcaaggaatgtgtt
gatgccggctggtgggaaggagaacttaatgggaaaaagggtgtttttccagacaactttgtcaagctcctcccttctgactttgaaaaggaactccata
gaccgaagaagcctcctcctccatcagctcctgtcaccaaatcaggcacaagtggtacctcagagagaaaacaggacatcaggaagatccccccagagag
accagacaccctgccgcagaggccagatgagaaggaaaggagtgaaagagaccacaaagtgtcagactcactgaagcactcagtacccgctatacctcca
aagaagcctcgtcctcctaagacaaactctttaagtagacctgggacactgccccctcgaagaccagaaagaccagtagggcctgtaacgcacggaagga
gtgaaagtccaaagtcagaggtgggaatcaatacagtgtccagtacgcctgaacgagacccctccgataaaagcaatgacatcgatgtagaaggttttga
ttcagttgtgacagtgggagaaaaactaagtcatccgactgcatcaagacctaaatccagtgggcgacgtcctccatcccagtcactgacatcgtcttcc
ctatctagtccagatttctttgattccccaagcccagaggaagagaaggatgagcttacagccttggcacagagagcaatagaggcttccaagaaaacag
caagatctgctgcaccatcacaaatgccagataacagaactgttttaccgcccaagccgggaggcttgatctccaacgtgagcttctctcatggggcatc
tggagcaccatcagcattccacaccgttgctgctggcagccacaggtcgaactctccatccttctcgagcgcagaaacaagacagaaggctgatcatagt
cagtcgcccttagaagagttacagtcacaggtcaaggagctgagatctatcgttgaaacaatgaaagaccaacagaagaaggagatcaaacaattacttt
ctgaactagacgaagagaaaaagatacgattaagattacagctggacgtcaacgaaatcaagaaagctctacaatccaaataaggcaaagaacaaagaga
aggtgtcatggaatccgctgcaagtcctcgaatgaccgaacacttccgaccccatcagccaacagaacctggtgccaaatgaattcagatttgcctcaaa
caagcggaaagcacaacagcagctccacctatcagagactcctttgtgatatttataatgtggcacatgtgacaagttgacgttatttccagctcgtgct
gaagtgctcctacttagccgccgctgctcgggtgccagagggaactacatggtattgctcctcgcctctctggcgctccggggagacagaaaactgcaaa
tgaataaactcaggcagtgcacttcagagtggtactttttactgatgatattttttccatgaataaaatgtatttcagattgtctgtttacaagctttat
aatctctatgtttctggtgtacgtcttttatccccctgcccccaagatccttccacctgtttgtacaaactgtagtcatgtgggttttgttgtttttttg
ctctagtatgtaccggctagggattctgggtttcttattattatagtatacatatgcaaagtgcagcccatgggaaaatgctgaaagcgcttctgaaatg
tatttaactgtgtgtaaaagactggaatggtccttaaacatgctttgtgcctttctatttgcctaaagcagagttgcaaaaaaatgtatttatggtttat
tgtaaaagagcgtatagtgttgagcacgccagtgggtggtggaaaggctcctccccagcagtattatgtgggtacgccagtcatgtgagtgtggccccct
gattccctttcaggccagaagggcctttgtagcaaatggtcatagcaatagtccaaatagccaaatttcataatgaatgcaataaaaaacatttgatctt
gtcaatctgtcattcctagcatttctaatcatggacctcagtgttacttcatccaaattcagcattcactttatcctgtaccagttgcactgggctgaac
aactgagctactgtccggccctgaattacacactggctgctcagagtttgctgtggaggcctgtgacattagctaagttgtggggcgtatttaggtccca
tcctactgatcagatattttccatttatgcagacctgtcgactctcccaaatttttctagagtcaacaatatttataccccaatgtaggaaggggtgcgg
tggagcaaagggcatagtcagggtggtatatgctgtgggcaaggccaaaattctcccagattcaggttgatgtcctggggatcagagctgccaactctgg
ggctttccaccctagtcgtgaggtccacccaacactgcaacccctccccccacccataccttgtgttctcccttgtattctcccttgtggctggcatcag
gggggagcgtccagagtgtcaggtcgggagcgggtctgggtcagcggggcccatctgtgtcctgtcggctcaatccggccctgttgatgtctctgtcaga
gcttttccaaaatgttctaaacattcttagccagaccctaagggcagatgggacatttaggggagtatttattatgctgtgtaaaactaatttgccgaaa
aaacggagtaaaaagttgtgtaaaataaatggaaaagatcgccatctgaatgccggatattacgccggatattacgccattattttccataagttctggt
ggtataaaaaaacgcataaaacaattacgccgtttttacgtcatttttacacgccgaagcctgccgatgtgtggcgaattttctcgccgttttttacaca
gcataataaatatgccccatagttgaccggcattaatgtaaatctccaggtgtaaaaaatacacccgaagtagccgaagttgcaacttttatttcaaatg
accagaaaaacttcctaaaaactaaaattcccaaccttttataggtcacccactgtggttttgcatttgtttcccaatgctgtcccgtaatatcatggat
acctgcaattggattgaatcgtgaggcgccaaatcttctgaggttccacatgggtaattactgggctcagttttctccaagcccctccggcccactgcgc
agccaccatggcttgggagcatcggctgttcctgcacatttcacccccacaagcaaaaggacattcattatcagaagcttgggcacaaatggcctgtaaa
gtgatcagtgttctgattttttttctattaaattgattttacttttattgtgatttaagagataatataatatatatgttcagcctttgggtgcatgttg
gacctctggcacccagaagtgtaatacattagagagggcatgactttttttaaataaaatgtttttaataaaattccacatttttacattcaaaaaaaaa
aaaaaaa
5' EST: CX916588
[+]aaggacgaggcggcggagatgtcaggtcgcctttagttacctgccccagaatgaggatgaacttgaacttaaagttggagaaatcattgaagttcttggt
gaagtggaggagggctggtgggaaggtgtccttaatgggaagaccggcatgtttccttccaatttcatcagggagattgtaactgaaacagaaatcggta
attttgagcaacagataaaaacagcatttaaagatactactggctcagaaagtgatggcggtgattccaagttagaaggaaccaatggaacaagtggggg
ggaaacccagtcgaaaaggatcaggggattcggctttggggatattttcaaagataaaccaattaaactcagaccaaggtcaatagaaatggaaagtgaa
attgtgccaatagaaaaggcaatgggaaagaaaatgccacccactgtgacttcacaggagccgatgaaaatagagacagagagcaaaacaaaacccaggg
agtactgtaaggtcctattcccatatgaagctatgaatgaagatgaactgacaatcagagacggtgatattgttactgtattaagcaaggaatgtgttga
tgccggctggtgggaaggagaacttaatgggaaaaagggtgtttttccagacaactttgtcaagctcctcccttctgactttgaaaaggaactccataga
ccgaagaagcctcctcctccatcagctcctgtcaccaaatcaggcacaagtggtacctcagagagaaaacaggacat
3' EST: CX916587
[+]ttttttttttttttttgaatgtaaaaatgtggaattttattaaaaacattttatttaaaaaaagtcatgccctctctaatgtattacacttctgggtgcc
agaggtccaacatgcacccaaaggctgaacatatatattatattatctcttaaatcacaataaaagtaaaatcaatttaatagaaaaaaaatcagaacac
tgatcactttacaggccatttgtgcccaagcttctgataatgaatgtccttttgcttgtgggggtgaaatgtgcaggaacagccgatgctcccaagccat
ggtggctgcgcagtgggccggaggggcttggagaaaactgagcccagtaattacccatgtggaacctcagaagatttggcgcctcacgattcaatccaat
tgcaggtatccatgatattacgggacagcattgggaaacaaatgcaaaaccacagtgggtgacctataaaaggttgggaattttagtttttaggaagttt
ttctggtcatttgaaataaaagttgcaacttcggctacttcgggtgtattttttacacctggagatttacattaatgccggtcaactatggggcatattt
attatgctgtgtaaaaaacggcgagaaaattcgccacacatcggcaggcttcggcgtgtaaaaatgacgtaaaaacggcgtaattgttttatgcgttttt
ttataccaccagaacttatggaaaataatggcgtaatatccggcgtaatatccggcattcagatggcgatcttttccattattttacacaactttttac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropTe3 and Te5 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: testis | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | ![Expression Image Expression Image](image/thumbnail/XB-IMG-41414.jpg) |
Usage:
Suppliers: