XB-CLONE-3170334
Clone Name: IMAGE:7857129
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Gene:
ndc1
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC123979 [+]
ACATGACCATGCTCCGAGAGAGACAGGTTCTCCGGTGGCGAGTGGCCGCCAGCCTTGCTTGGTCAGTCATACTTCTGCCTGTGTGCTGTGTCGTCTTTAT
TGTCCTTAGCCAGATACAAATTTTACATCCCATACAATGGCTTACAGATTCCATCAGTGATCTTACGAGCAGTTACACAATCTTCTGTCTCTTGTTAATA
AGTGCCATCTTGGGACTGCAATGTACTTTTCTTATGGAGTATTACACAGTGGTGCCGTCTATTCCCTGCTCTCGACTGGCCCTTATTGGAAACACTCTCC
TTCCGCATCGTATTGTGCACTCTTTAGCTCATGTTGTCATGGGGGTGCTGGCCTCCTGGTGCTGTGCTGTTATGAGCAAAGGGAAATATCAGCTTATAGT
TGTTTCCTGCACTTCCCTACCAAGTGAGGATGAGTCTGACAAACCTTCTCTTTGCCTCAATGAGAGTCATCTCTTTCAGTTATTGTGTGGTGCTTTCTTT
GGCTATTGTTACAGTCTCCAGTATTTTGTTCACAACATGAACTATTTGTCCTTCCCATCAATACAGCAATACAAGTATCTGCAGTTTAGAAGATGTCTAC
CACTTATTATAAAGCAGAGCAGTTTCCAGTCTCTGTACTTCACTCGCAACTATGCCATTCTCTACTATTTATTTGGCAACATTCCACGAACATGGATCCA
AACTGCACTAAACCTTCACATTGACAGGCAGCAGCCCTCACTTGACACACTAAGGGGACTCTTGAATCTGACAGTCTTTTACCAGATATGGTTGTCTGGC
ACTTTTCTGCTTTCCGCTTGGTACATGGTCTGGATTTTCTTCAGAATTTATACAACAGAGGCTCGTATCTTCCCTGTACAGACCTCCTTTGCTGAAGAAG
CAGAAAAATGCCTTCCATTCATTTTGAGTAGTAATACACTTCCTCTTGTAAAGTATTTGGCCATGCAAGATCTTGTGTTGCTCTCTCAGTATTCACCATC
TAGACGACAGGAAGTGTTTAGCCTGAGCCAGCCAGGTGGGCATCCACACAACTGGACTGCAATCTCCAAAGAATGTTTGAACTTACTGAGCAGTTTGACA
TCCAGATTAATTGCTCATCAGGAAGCTGCTGCAAGTAATGGACGGATGAAAGTCCCATCCTCCCCTAAGCAGACTAGAAAGTCCTCAAGCAGCTCAGGTA
CATCTCTTATTGAAGACTCAGCTGAGCAAACTCAGAAGTTAAGTACCGTTCCTAGAATAGGTATCCCCTCTCTACTAAAGACTACCTCTCTAAAATCCTC
ATTGGACACTGGAAGTCCATTTACACCTCCCGGAGTTAAACGAATGTCTGAATCTCTGGACCCAAATACCCCATGGCACGACTCTGTCCAAAGTCCCCAC
ATCATGAGAAGGAGTGCAAAGCTGTGGACATCAGATTCTAGTGTTCAGAAAAATGGCTCTGAGGTTTCCAATCTTTCCCCAGTAACGCTTAGCCCTGTAT
GTAATGGTGCAAAACAGGGAATCTTCTCTACATGGTTCCAGCACAAGCTTGATCAGATCAAAAACTTCTTGTCAAAGAGAGGTCTGATTATGTACCTGTT
TAGTAAGCATCCAGAGGCTTCTAGTGAGGATGTATTTGCAGATGCACAGATTCATATTTGGGCACTGGAAGCATTATCTCACCTCGTGGCTGCCTCCTTC
TCAGAAGACAGAATGGGAGTAGTACAGACCTCTCTTTCTGCTGTACTTGCAACTTTCTTTACTTTGCAGGAGGCTGTAGAAAAACATTTTAAACTCCCCC
ATGCATCCAGCAAACCAGTGAGAAACCCTGGTAGTTTACTGGACTCTTCCTACAAGACCCTGAGGTTTTCACTTCGAGCTGCTTTAAAAACAGCAATCTA
CAGGATAACCACAACATTTGGAGAACACTTACATGCTGTTCCTGTCTCATCCGAGCATCAGAAAAAGCTTCAGCAATTTCTCGACTTCAAAGAATAAAGT
TGGATTCCAAGTTTTGTTTGGCACTTTCCTGCTCTTGTGACTAATCAGGGCATAACAAATTCAACTAGAGACCTTGGGAGAAGACAAACCAGAAATTGGT
AAACCGCAGTACATGTGAAAGGTGGTTCTGGTCTATTTGATGAAAATACAAAAAGAAGGTCACACGCACTGTTGCTTTAATGTAATTGCTTCAATCAGAA
AAAAAATACTTTAAAGTTACAATGCTGTATGTTAAAGGCCACGTTCTGTCCTCTGCTGCTATTTACTTTTCTAGAAGGTGTTAGTATTAAGGTTAGATGC
AATTTCAGCTTTTTGGTTTTTTTTCATATTTAACTAAATTGATAATGTATCAATCTAATTGTGCCATGACCACACTTTTCTGAAAATAAATATCCCAGGC
ACTTCATTGTAAATTAGTAGAAGCAACTTAATTACCAAAAATGGGTCATTGACTGTACTTGTTGATCACCATTAAGAACAGGCATATATTAGGGGGTTGT
TAAAAGTGCGCAGTCCGTATATTTTTCAGACAGCCTAGCACATACAAGCAGCGTTATACTACTACTTTACTAACGCCTTTATAAACTCAGGTTAGAGTTA
AACTGTGAGTTCAGCTAAGCCATCACGCCTAGAAATGTTTTCCTCTTATTTTTGGTTGCACATATGATGTGAAAGATTTGGTTACCCAAATGTTTTGGCT
GAAAAATGTTTAGCAACTGGCCTAATGAAGGGCTTGCACCTCACTTAGTAGTATGTGCACTAAGGGATGCTAAGCTGTGTATGTGCTATTTATCAAACCC
ACTTTGTATGGATGTAGGTCTGTTTTTAGTGGAATCTATATCTGTTCTCTTTTCAGCTCTATTTTTCTCTTATTTCTTTCTCTTTTTCATCTTTGTTCTG
TGTTTTGTATATGTGAATTTTTAATAAAGTGCAATCACC
5' EST: DT400848 [+]acatgaccatgctccgagagagacaggttctccggtggcgagtggccgccagccttgcttggtcagtcatacttctgcctgtgtgctgtgtcgtctttat
tgtccttagccagatacaaattttacatcccatacaatggcttacagattccatcagtgatcttacgagcagttacacaatcttctgtctcttgttaata
agtgccatcttgggactgcaatgtacttttcttatggagtattacacagtggtgccgtctattccctgctctcgactggcccttattggaaacactctcc
ttccgcatcgtattgtgcactctttagctcatgttgtcatgggggtgctggcctcctggtgctgtgctgttatgagcaaagggaaatatcagcttatagt
tgtttcctgcacttccctaccaagtgaggatgagtctgacaaaccttctctttgcctcaatgagagtcatctctttcagttattgtgtggtgctttcttt
ggctattgttacagtctccagtattttgttcacaacatgaactatttgtccttcccatcaatacagcaatacaagtatctgcagtttagaagatgtctac
cacttattataaagcagagcagtttccagtctctgtacttcactcgcaactatgccattctctactatttatttggcaacattccacgaacatggatcca
aactgcactaaaccttcacattgacaggcagcagccctcacttgacacactaaggggactcttgaatctgacagtcttttaccagatatggttgtctggc
acttttctgctttccgcttggtacatggtctg
3' EST: DT400847 [+]ggtgattgcactttattaaaaattcacatatacaaaacacagaacaaagatgaaaaagagaaagaaataagagaaaaatagagctgaaaagagaacagat
atagattccactaaaaacagacctacatccatacaaagtgggtttgataaatagcacatacacagcttagcatcccttagtgcacatactactaagtgag
gtgcaagcccttcattaggccagttgctaaacatttttcagccaaaacatttgggtaaccaaatctttcacatcatatgtgcaaccaaaaataagaggaa
aacatttctaggcgtgatggcttagctgaactcacagtttaactctaacctgagtttataaaggcgttagtaaagtagtagtataacgctgcttgtatgt
gctaggctgtctgaaaaatatacggactgcgcacttttaacaaccccctaatatatgcctgttcttaatggtgatcaacaagtacagtcaatgacccatt
tttggtaattaagttgcttctactaatttacaatgaagtgcctgggatatttattttcagaaaagtgtggtcatggcacaattagattgatacattatca
atttagttaaatatgaaaaaaaaccaaaaagctgaaattgcatctaaccttaatactaacaccttctagaaaagtaaatagcagcagaggacagaacgtg
gcctttaacatacagcattgtaactttaaagtattttttttctgattgaagcaattacattaaagcaacagtgcgtgtgaccttctttttgtattttcat
caaatagaccagaaccacctttcacatgtactgcggtttaccaatttctggtttgtctt
Library:
Description: The library was prepared from 5 ug of poly A+ RNA by oligo-dT priming (5'- ACTAGTGCGGCCGCCTAGGCCTCGAGTTTTTTTTTTTTTTTTTTV-3') and Stratascript reverse transcriptase. After ligation of EcoRI adapters (5'-AATTCGGCACGAGG-3') followed by kinasing adapters and by XhoI digestion, the cDNA was size selected by chromatography on Sepharose CL-2B columns and fractions containing cDNAs larger than 1000 bp were ligated into EcoRI/XhoI-digested pCS107. Average insert size 1745 bp. Reference for library construction: Current Genomics 4, 635-644. Library constructed by Michelle Tabb and Bruce Blumberg (Dept of Developmental and Cell Biology, University of California, Irvine).Anatomy: oviduct | Stage: |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCS107
Type: plasmid
5' Restriction Site: EcoRI
3' Restriction Site: XhoI | |
Usage:
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