XB-CLONE-2499600
Clone Name: IMAGE:8920652
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Gene:
pcdh7
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Species: Xenopus tropicalis
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Sequence:
Full length sequence: BC168528 [+]
gattgcaggtagcaccgactgcggctgcaccgctcgcaacttgggggagctcggagctgtccctcagcactgggggaacggagcccgtctggcaccatcc
ggaggaactttgtgcagcccgggggactgattaacattgagccgctcaggatctactggcgtttggctcctatgggtctctcattaccggatcttattct
ggaataacacgaaagcctgctgctggctggaggaagtcggcacaagaactgtcgcctgtcagatctgggtgacagcgattattgcctctttctttgtatc
agaggaattagctcttgcctgtcggacgtgggagacagttactgtttgtcggaagagggagacagctgtgcctgctttctgtcccgggaactgtaccaag
agagtcgtgccaagtcgcagggatgagcggctaaacttgctgcaaccgctaagaagcaagcaccacaaagcgtgagttgccccggtgtgtccgattcagt
acagggggcaaatcatgaggactgagggggtaccgagttgctggagctcctggctgctcctgctgcagatttccctggctctggccgccaccaaacagct
gctgaagtaccggattgcggaggaaggtccggccgatgtgcggatcggcaatgtggctaaggagatcgggatcgtgaaaggctccggggacgtgaccttc
agcctggagtccggttccgactactttaagattgacaacgtgaccggggagctgagcaccacagagcgccgaatagaccgggagaagctgccgcagtgcc
agatgatcttcgatgagaacgagtgcttcatagactttgaggtgtcggtgatcgggccggcgcagagctgggtggagctgtttgagggtagggtggtcat
tctggacatcaacgataacaccccgacttttccatccccggtgctcaccctcactgtagaggagaaccggccggtggggactctgtatctgctgcccaca
gccaccgaccgtgacttcggcaggaatgggatagagcgctacgagctgatccaggacgcgggggaaagtctgtatgtgtccggccgaaggggggcggcag
agagctccctgtacccgggcaagaggaggatggagtcggacagtaggagcagcgttttcgagctgcaagtggccgacacctcggatggggagaagcagcc
gcagctcatagtgaaggggccgctggaccgggaacagagggattcctatgagctcaccctgcgggtaagagacgggggagaacctccccgatcctcccag
tccattctcagggtcctcatcaccgatgtcaatgacaacaaccctcggttcgagaaaagcgtgtacgaggcggacctggcagagaacagcgccccaggca
cccctatcctgcaactgagagccaccgactacgacgtaggggtaaacgggcagatcgagtatgtgtttggggcagcaaccgagtcggtgagaagactcct
caggctggacgagaactccggttggctcagtgtcctgcaccggatagacagggaggaggtcaatcagctgagattcactgtcatggccagggataggggg
cagccccctaaaactgacaaggccacagtggtccttaacattaaggatgagaacgacaatgtgcccctgatagacatcaggaagatcggcaggatcccag
tgaaggatggcatggccaatgtggcggaggatgtgctggtagatacccccatagccttggtgcaggtgtcagacagggaccagggagagaatggagtcgt
tacctgcactgtggttggggacgtcccgttccagctgaaacctgcaaatgacggagagggggagcagaacaagaagaagtatttcctgcacacctcggcg
cccctcgactacgagaacgttaaggaatacaatgtcatcatagtggccgtggattccggcagccccagcctatccagcaataactcccttatcgtcaaag
tgggggacaccaatgacaaccccccggtgttcagccaggccgtggtggaagtggccttccctgaaaataatgtactgggagagcgagtggccacagttct
ggccacagacgccgacagcggcaaaaacgcagagatcgcttattccctggagccttccatggaagggatcttctccattcatccagacactggggatata
accgtcaatatcatcctggacagggagcagacggacaggtacgagttcaaagtgatcgccaaagacaagggaatccccgtcctgcaggggacaacctcgg
tggtggtccaggtggcagataggaatgacaacgagcccaggttcatgcaggacgtgttcaccttctatgtgaaagagaacttgcaacccaacagcccagt
cgggatggtgaccgtgatggacgcagacaaaggtcgcaatgcagagatgagtttatttatcgaggaagacagcgatatattctccatagagaacgataca
ggaactatctattccactgtctcatttgatagggagcaccagaccagctacacatttaaggtgaaagcagtagatggtggagaccctccaagatcggcca
cagccaccgtgtccctttttgtgatggatgaaaacgacaatgcccctaccattagtttcccaattaatagttcctatgctgtgctgtccccttccagcaa
tgtgaggactgttgttgcctctgtagtggcaaccgacagtgacaatggggtcaatgctgatctgaactacagcatcgtaggggggaatccctataagctc
tttgaaattgactccaccagtggagtggtgtctttggttggcaagctcacctcaaagcactatggtctgcaccgactagtggtgcaggtgaatgacagtg
ggcagcccccccagtctacaatagctttggtacatgtgtttgtcaatgaaaccatctccaatgccacagtggttgattaccaaattgccagaagtttgca
caccccattaacccaggatattgctggagaccccagctatgacatgagcaagcagagactaagcatagtgattggagtggtggctgggatcatgactgtc
atcctcatcatactagtagtggtcatggccaggtactgtagagccaaaagcaagaatgggtacgaagctgggaaaaaggaccatgaggatttcttcaccc
cccaacagcatgataagaacaaaaaaacccaaaaaggacaagaaaaataagaaatccaagcagcccctgtacagcagtatagtgacagtggaggcttcca
agcccaatggacaaagatatgacagtgtcaatgagaagctgtcagacagccccagtatgggaaggtacagaactgttaatggaggtccgggtagccccga
tctggcccggcattacaaatccagctccccactgcctactgtacagctccaccctcagtcacctactgctggcaaaaaacaccaggctgtgcaagactta
cccccagccaatacttttgtaggagctggagacaacatctcaattggatcagaccactgttctgagtatagctgtcaaaccaataacaagtacagcaaac
aggtcactgcacacccgtcctgtgatcctcagctgcgatcttgagaaatgtctgtcttaaagagctagagaaatgggatttgtgggacaattttactgac
agagttactctaataaatgtaaatagattgactctgctgcctaaaaacaaaaacaaaaaaaaaatatgaaagaagcttgaagtcacgtgcatcggatatc
tctggagagccttgaaaaccatttatatatacatttaaagacataaacacacaaaaactttttataaatactagtttttacttgccttataacaaaatgg
aatttcacaaaaaaagcaagactgtggaatacctaaggaattcatcgtatggttaaagtttgcaatggaaaggtatgctgtatgtataaatggttctact
gacccatccttactttctctgaatgcttataatcttgtgtgatttctgaaaaatgtactatgtgctaatggtttgttcaatgttatgtattttttttttt
ttttttatttctctcttgcaaaaattggactcgaaaaaaagccacaggagcttcgaaaatggcaaaacaaacttaagaaggaacgttttattttcttaaa
ccaataaaaagtatatttattatataaagatgaatatttattatacgtataaaaaaaaaacgaagaaaaaaaaaaaaaaa
5' EST: EL834841 [+]gattgcaggtagcaccgactgcggctgcaccgctcgcaacttgggggagctcggagctgtccctcagcactgggggaacggagcccgtctggcaccatcc
ggaggaactttgtgcagcccgggggactgattaacattgagccgctcaggatctactggcgtttggctcctatgggtctctcattaccggatcttattct
ggaataacacgaaagcctgctgctggctggaggaagtcggcacaagaactgtcgcctgtcagatctgggtgacagcgattattgcctctttctttgtatc
agaggaattagctcttgcctgtcggacgtgggagacagttactgtttgtcggaagagggagacagctgtgcctgctttctgtcccgggaactgtaccaag
agagtcgtgccaagtcgcagggatgagcggctaaacttgctgcaaccgctaagaagcaagcaccacaaagcgtgagttgccccggtgtgtccgattcagt
acagggggcaaatcatgaggactgagggggtaccgagttgctggagctcctggctgctcctgctgcagatttccctggctctggccgccaccaaacagct
gctgaagtaccggattgcggaggaaggtccggccgatgtgcggatcggcaatgtggctaagagatcgggatcgtgaaacgctccggggacgtgaccttca
gcctggagtcccggtccgactactttaagattgacaacgtgaccggggagctgagcaccacagagcgccgaatagaccgggagaagctgccgcagtgcca
gatg
3' EST: EL834842 [+]tttttttttttttttcttcgttttttttttatacgtataataaatattcatctttatataataaatatactttttattggtttaagaaaataaaacgttc
cttcttaagtttgttttgccattttcgaagctcctggggctttttttcgagtccaatttttgcaagagagaaataaaaaaaaaaaaaaaaatacataaca
ttgaacaaaccattagcacatagtacatttttcaaaaatcacacaagattataagcattcagagaaagtaaggatgggtcagtaaaaccatttatacata
cagcatacctttccattgcaaactttaaccatacgatgaattccttaggtattccacagtcttgctttttttgtgaaattccattttgttataaggcaag
taaaaactagtatttataaaaagtttttgtgggtttatgtctttaaatgtatatataaatggttttcaaggctctccaaaaatatccgatgcacgtgact
tcaagcttctttcatattttttttttgtttttgtttttaggcagcagagtcaatctatttacatttattaaagtaactctgtcagtaaaattgtcccaca
aatcccatttctctagctctttaagacagacatttctcaagatcgcagctgaggatcacagagacgggtgtgcagtgacctgtttgctgtacttgttatt
ggtttgacagctataactcagaacagtggtctgatccaattgagatgttgtctccagctcctacaaaagtattggctgggggtaagtcttgcacagcctg
gtgt
Library:
Description: The library was made from dT primed cDNA and cloned into vector pCS107. PolyA RNA were primed with an oligo dT primer (5'-GACTAGTTCTAGATCGCGAGCGGCCGCCCTTTTTTTTTTTTTTT -3'), ligated to a SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3') and digested with NotI. cDNA was size selected using 1.1% agarose gel electrophoresis (>0.6kb) then ligated into NotI and SalI digested pCS107 vector. Primary library, non-amplified. Library constructed at the DOE Joint Genome Institute (Walnut Creek, CA) as part of the Xenopus Gene Collection project.Anatomy: testis | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCS107
Type: plasmid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: