Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.
Search High Throughput Sequencing Data (RNA-Seq, ChIP-Seq, etc.)

Keyword/ID:
Species:

Experimental Conditions*

Gene Manipulated:
Treatment Area:
Stage: From: To:
Manipulation Type:

Assay*

ChIP-Seq Antibody:
Tissue:
Stage: From: To:
Assay Type:
*Suggested terms will appear as you type, but only for matches in the GSE dataset.

GSE Search Results:

???pagination.result.count???

???pagination.result.page??? ???pagination.result.prev??? 1 2

GSE Title Assay Types Article
Sample
GSE86382 RISC factor MOV10 is required for normal development and viability in both mouse and Xenopus RNA-Seq XB-ART-54381
  
GSE87652 Genomic integration of Wnt/b-catenin and BMP/Smad1 coordinates the transcriptional program of foregut and hindgut progenitors [ChIP-seq] ChIP-Seq XB-ART-53106
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE87653 Genomic integration of Wnt/b-catenin and BMP/Smad1 coordinates the transcriptional program of foregut and hindgut progenitors [RNA-seq] RNA-Seq XB-ART-53106
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE88975 RNA-Seq of Xenopus tail regeneration RNA-Seq XB-ART-53040
  
Select All 
Xtr   
Xla 
 
GSE89271 RNAseq and ChIPseq profiling of Foxn4 and Foxj1 in multiciliated cells RNA-Seq ChIP-Seq XB-ART-52793
  
  
Select All 
Xtr   
Xla 
 
GSE92366 H3K4 Methylation-Mediated Memory of an Active Transcriptional State Impairs Nuclear Reprogramming RNA-Seq ChIP-Seq XB-ART-54691
  
  
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE92382 Regulatory remodeling in the allo-tetraploid frog Xenopus laevis RNA-Seq ChIP-Seq XB-ART-54195
  
  
Select All 
Xtr   
Xla 
 
GSE93195 Spemann organizer transcriptome induction by early β-Catenin, Wnt, Nodal and Siamois signals in Xenopus laevis RNA-Seq XB-ART-53589
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE96655 Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus RNA-Seq XB-ART-54637
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE97367 BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage RNA-Seq XB-ART-56019
Select All 
Xtr   
Xla 
 
GSE102047 The Xenopus Primordial Germ Cell Transcriptome: Unexpected Role for sox7 in Early PGC Development RNA-Seq XB-ART-54309
GSE103240 A Molecular Atlas of the Developing Ectoderm Defines Neural, Neural Crest, Placode and Non-Neural Progenitor Identity in Vertebrates. RNA-Seq XB-ART-54144
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE104848 RNA-Seq analysis of localization along animal-vegetal axis of Xenopus laevis RNA-Seq XB-ART-54969
Select All 
Xtr   
Xla 
 
GSE106320 Bighead is a Wnt antagonist secreted by the Xenopus Spemann organizer that promotes Lrp6 endocytosis RNA-Seq XB-ART-55302
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE107424 Transcriptomics of Dorso-Ventral axis determination in Xenopus tropicalis RNA-Seq XB-ART-54855
  
  
GSE111454 RNA Sequencing facilitates the identification of transcriptional targets of Pitx1 in Xenopus laevis RNA-Seq XB-ART-54672
  
GSE112364 RNAseq profiliing of Xenopus laevis animal caps expressing Xnr2 at st14 RNA-Seq XB-ART-54874
GSE112718 Retinoic acid induced expression of Hnf1β and Fzd4 is required for pancreas development in Xenopus laevis RNA-Seq XB-ART-54918
  
  
  
GSE113186 The role of maternal pioneer factors in predefining first zygotic responses to inductive signals RNA-Seq ChIP-Seq Hi-C DNase-Seq XB-ART-56302
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE116819 Transcriptome analysis of wild type and RAR deficient frog faces during development RNA-Seq XB-ART-55440
  
GSE117754 Critical roles of lysine demethylase Kdm3a in craniofacial and neural development during Xenopus embryogenesis RNA-Seq XB-ART-55525
  
  
GSE118024 Endodermal maternal transcription factors establish super enhancers during zygotic genome activation RNA-Seq ChIP-Seq XB-ART-55999
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE122551 The Spatio-Temporal Control of Zygotic Genome Activation RNA-Seq XB-ART-56693
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE124563 Transcriptome analysis of regeneration in Xenopus laevis twin embryos RNA-Seq XB-ART-56074
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE126058 Identification of genes regulated by Erythroferrone (ERFE) in Xenopus embryos at tadpole stages. RNA-Seq XB-ART-56559
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE137844 Comparative Gene Expression Profiling between Xenopus Optic Nerve and Spinal Cord Injury to Identify Genes Involved in Successful Regeneration of Vertebrate CNS Axons RNA-Seq XB-ART-57252
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE138905 ATAC-seq identifies accessible chromatin domains in gastrula stage Xenopus laevis ATAC-Seq XB-ART-56750
GSE143795 Specification of embryonic mesoderm by Pinhead signaling RNA-Seq XB-ART-57304
  
  
GSE145619 Combinatorial action of transcription factors in open chromatin contributes to early cellular heterogeneity and organizer mesendoderm specification RNA-Seq ATAC-Seq
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE146830 Chromatin accessibility dynamics and single cell RNA-Seq reveal new regulators of regeneration in neural progenitors ATAC-Seq XB-ART-56933
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE148726 Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endodermal gene regulatory network RNA-Seq ChIP-Seq XB-ART-57340
  
  
  
  
  
  
  
  
  
  
  
  
  
  
Select All 
Xtr   
Xla 
 
GSE149538 Neurodevelopmental disorder risk gene DYRK1A is required for ciliogenesis and brain size in Xenopus embryos RNA-Seq XB-ART-57038
  
GSE150911 Using RNAseq for identifying hepatic genes involved in multi- (F1 generation) and transgenerational (F2 generation) responses to chronic benzo[a]pyrene exposure (F0 generation) in Xenopus tropicalis RNA-Seq XB-ART-57563
  
  
GSE155553 Parallel in vivo analysis of large-effect autism genes implicates cortical neurogenesis and estrogen in risk and resilience [Xenopus] RNA-Seq XB-ART-57754
  
  
Select All 
Xtr   
Xla 
 
GSE160777 A temporally resolved transcriptome for developing “Keller” explants of the Xenopus laevis dorsal marginal zone RNA-Seq XB-ART-57664
Select All 
Xtr   
Xla 
 
GSE164204 Cellular response to spinal cord injury in regenerative and non-regenerative stages in Xenopus laevis. RNA-Seq XB-ART-57773

???pagination.result.page??? ???pagination.result.prev??? 1 2