Expression summary for shh

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Experiment	Species	Images	Stages	Anatomy	Assay
Harland lab in situ screen Assay Harland Lab	tropicalis	1 image	NF stage 20	notochord	in situ hybridization
Khokha MK et al. (2005) Assay Paper	tropicalis	2 images	NF stage 14 to NF stage 15	notochord	in situ hybridization
López SL et al. (2003) Assay Paper	xenopus	1 image	NF stage 10.25 to NF stage 14	notochord	in situ hybridization
López SL et al. (2003) Assay Paper	laevis	1 image	NF stage 10.25 to NF stage 14	notochord	in situ hybridization
Offner N et al. (2005) Assay Paper	xenopus	1 image	NF stage 15	notochord	in situ hybridization
Lupo G et al. (2005) Assay Paper	xenopus	2 images	neurula stage to NF stage 18	notochord	in situ hybridization
Silva AC et al. (2003) Assay Paper	laevis	1 image	NF stage 22 to NF stage 24	notochord	in situ hybridization
Howell M et al. (2002) Assay Paper	xenopus	1 image	NF stage 35 and 36	notochord	in situ hybridization
Paper	laevis	1 image	NF stage 28	notochord	in situ hybridization
The presumptive floor plate (notoplate) induces behaviors associated with convergent extension in medial but not lateral neur... Paper	laevis	1 image	NF stage 11 to NF stage 13	notochord	in situ hybridization
Cholesterol homeostasis in development: the role of Xenopus 7-dehydrocholesterol reductase (Xdhcr7) in neural development. Paper	laevis	1 image	NF stage 33 and 34	notochord	in situ hybridization
Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase. Paper	xenopus	1 image	NF stage 10 to NF stage 35 and 36	notochord	in situ hybridization
Olfactory and lens placode formation is controlled by the hedgehog-interacting protein (Xhip) in Xenopus. Paper	laevis	1 image	NF stage 32	notochord	in situ hybridization
Distinct expression of two types of Xenopus Patched genes during early embryogenesis and hindlimb development. Paper	laevis	1 image	NF stage 26 to NF stage 31	notochord	in situ hybridization
Neuroectodermal specification and regionalization of the Spemann organizer in Xenopus. Paper	xenopus	1 image	NF stage 10 to NF stage 12.5	notochord	in situ hybridization
Xenbase User Curated Experiment European Xenopus Resource Centre (EXRC)	tropicalis	1 image	NF stage 32	notochord	in situ hybridization
Xenopus sonic hedgehog guides retinal axons along the optic tract. Paper	laevis	1 image	NF stage 32 to NF stage 37 and 38	notochord	in situ hybridization
The role of Xenopus dickkopf1 in prechordal plate specification and neural patterning. Paper	laevis	1 image	NF stage 13	notochord	in situ hybridization
The Alzheimer-related gene presenilin-1 facilitates sonic hedgehog expression in Xenopus primary neurogenesis. Paper	laevis	1 image	NF stage 13 to NF stage 14	notochord	in situ hybridization
Takabatake T et al. (2000) Assay Paper	laevis	2 images	NF stage 27 to NF stage 35 and 36	notochord	in situ hybridization
Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional scre... Paper	tropicalis	1 image	NF stage 13 to NF stage 28	notochord	in situ hybridization
Rankin SA et al. (2012) Assay Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	notochord	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	1 image	NF stage 32	notochord	in situ hybridization
Distinct expression and shared activities of members of the hedgehog gene family of Xenopus laevis. Paper	laevis	1 image	NF stage 19 to NF stage 29 and 30	notochord	in situ hybridization
Multiple stage-dependent roles for histone deacetylases during amphibian embryogenesis: implications for the involvement of ... Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	notochord	in situ hybridization
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann''s organizer signals. Paper	laevis	1 image	NF stage 12.5	notochord	in situ hybridization
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann''s organizer signals. Paper	laevis	1 image	NF stage 13	notochord	in situ hybridization
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 15 to NF stage 35 and 36	notochord	immunohistochemistry
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 15 to NF stage 35 and 36	notochord	in situ hybridization
Rankin SA et al. (2014) Assay Paper	laevis	1 image	NF stage 32	notochord	in situ hybridization
The cytoskeletal protein Zyxin inhibits Shh signaling during the CNS patterning in Xenopus laevis through interaction with t... Paper	laevis	1 image	NF stage 15 to NF stage 27	notochord	in situ hybridization
Stolow MA and Shi YB (1995) Assay Paper	laevis	1 image	NF stage 32	notochord	in situ hybridization
E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation. Paper	laevis	1 image	NF stage 29 and 30	notochord	in situ hybridization
Patient Lab	laevis	16 images	NF stage 10.5 to NF stage 40	notochord	in situ hybridization
Koide T et al. (2006) Assay Paper	laevis	1 image	NF stage 22 to NF stage 44	notochord	in situ hybridization
Branford WW and Yost HJ (2002) Assay Paper	laevis	1 image	NF stage 26 to NF stage 27	notochord	in situ hybridization
Subcellular localization and signaling properties of dishevelled in developing vertebrate embryos. Paper	laevis	1 image	NF stage 24	notochord	in situ hybridization
Peyrot SM et al. (2011) Assay Paper	laevis	4 images	NF stage 16 to NF stage 35 and 36	notochord	in situ hybridization
Belyaeva OV et al. (2012) Assay Paper	laevis	1 image	NF stage 14	notochord	in situ hybridization
G protein-coupled receptors Flop1 and Flop2 inhibit Wnt/β-catenin signaling and are essential for head formation in Xenopus. Paper	laevis	1 image	NF stage 17 to NF stage 18	notochord	in situ hybridization
Cleavage of Chordin by Xolloid metalloprotease suggests a role for proteolytic processing in the regulation of Spemann organ... Paper	laevis	1 image	NF stage 14	notochord	in situ hybridization
A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification. Paper	laevis	1 image	NF stage 20 to NF stage 25	notochord	in situ hybridization
In synergy with noggin and follistatin, Xenopus nodal-related gene induces sonic hedgehog on notochord and floor plate. Paper	laevis	1 image	NF stage 28	notochord	in situ hybridization
Jin Z et al. (2016) Assay Paper	laevis	1 image	NF stage 20	notochord	in situ hybridization
Maintenance of asymmetric nodal expression in Xenopus laevis. Paper	laevis	1 image	NF stage 20	notochord	in situ hybridization
Pitcairn E et al. (2017) Assay Paper	laevis	1 image	NF stage 21	notochord	in situ hybridization
A novel role of the organizer gene Goosecoid as an inhibitor of Wnt/PCP-mediated convergent extension in Xenopus and mouse. Paper	laevis	1 image	NF stage 20	notochord	in situ hybridization
Prager A et al. (2017) Assay Paper	laevis	1 image	NF stage 20	notochord	in situ hybridization
Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development. Paper	laevis	2 images	NF stage 35 and 36	notochord	in situ hybridization
Kulkarni SS and Khokha MK (2018) Assay Paper	tropicalis	1 image	NF stage 16	notochord	in situ hybridization

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