Gene Expression Search Source

Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
pax6	xenopus		pre-chordal neural plate [+] anterior neural fold,optic field,pre-chordal neural plate border,Muller cell,accessory olfactory bulb,adenohypophysis,amacrine cell,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior entopeduncular region,anterior hypothalamus,anterior tectum,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,bipolar neuron,caudal tuberal region,cell body layer of the optic tectum,central amygdala,central nucleus of the thalamus,central retina,choroid,choroid fissure,ciliary body,ciliary marginal zone,conjunctiva,cornea,diencephalon,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,dorsal tegmentum,dorsal telencephalon,dorsal thalamus,eminentia thalami,external plexiform layer of the olfactory bulb,eye photoreceptor cell,globe,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the olfactory bulb,habenula,horizontal cell,hypophysis,hypothalamus,infundibulum,inner limiting membrane,iris,lateral amygdala,lateral forebrain bundle,lateral ganglionic eminence,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,lens,lens epithelium,lens fiber cell mass,lens placode,lens transitional zone,lower eyelid,magnocellular preoptic nucleus,mammilary region,medial amygdala,medial ganglionic eminence,medial pallium,medial septum,melanotrope,mesencephalic artery,mesencephalic vein,midbrain tegmentum,mitral cell,mitral cell layer of the olfactory bulb,neurohypophysis,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,oculomotor motornucleus,olfactory bulb,optic chiasm,optic disc,optic fiber layer,optic nerve,optic stalk,optic tectum,optic tract,outer limiting membrane,pallidum,pallium,pars distalis,pars intermedia,pars nervosa,peripheral retina,photoreceptor layer,pigment layer,pineal gland,posterior commissure,posterior hypothalamus,posterior tectum,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,pretectum,prethalamus,prethalamus basal plate,prosomere,prosomere 4,prosomere 5,prosomere 6,pupil,radial glial cell,retina,retinal ganglion cell,retinal ganglion cell layer,retinal inner nuclear layer,retinal inner plexiform layer,retinal layer,retinal neural layer,retinal outer nuclear layer,retinal outer plexiform layer,retinal pigmented epithelium,retinal progenitor cell,retinal progenitor cell region,retinal stem cell,retinal stem cell region,retromammillary area,rostral tuberal region,sclera,striatum,subcommissural organ,subpallium,subthalamic nucleus,suprachiasmatic nucleus,supraoptoparaventricular region,telencephalon,telencephalon septum,thalamus,third ventricle,torus semicircularis,trochlear motornucleus,tuberal region,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventral septum,ventral tegmentum,ventricular layer of the optic tectum,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,zona limitans intrathalamica,anterior neural tube,choroid fissure,eye,eye primordium,forebrain,iris,midbrain,optic nerve,optic stalk,optic tectum,optic vesicle

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Expression summary for pax6

Results 1 - 50 of 153 results

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Experiment	Species	Images	Stages	Anatomy	Assay
Wu J et al. (2006) Assay Paper	xenopus	1 image	NF stage 14 to NF stage 20	anterior neural tube, eye primordium	in situ hybridization
Wu J et al. (2006) Assay Paper	laevis	2 images	NF stage 14 to NF stage 20	anterior neural tube, eye primordium, pre-chordal neural plate	in situ hybridization
Zaghloul NA and Moody SA (2007) Assay Paper	laevis	1 image	NF stage 20 to NF stage 37 and 38	ciliary marginal zone, diencephalon, eye, eye primordium, lens, [+] lens placode, optic vesicle, retina, retinal ganglion cell layer, retinal inner nuclear layer	in situ hybridization
Atkinson-Leadbeater K et al. (2009) Assay Paper	laevis	2 images	NF stage 21 to NF stage 25	diencephalon, optic vesicle, retina, telencephalon	in situ hybridization
Schlosser G and Ahrens K (2004) Assay Paper	laevis	7 images	NF stage 13 to NF stage 33 and 34	diencephalon, lens, lens placode, midbrain, optic vesicle, [+] pre-chordal neural plate	in situ hybridization
Offner N et al. (2005) Assay Paper	laevis	1 image	NF stage 18	pre-chordal neural plate	in situ hybridization
Lupo G et al. (2005) Assay Paper	xenopus	3 images	NF stage 33 and 34	diencephalon, lens, retina	in situ hybridization
Terada K et al. (2006) Assay Paper	xenopus	1 image	NF stage 17 to NF stage 18	eye primordium	in situ hybridization
Wang JC and Harris WA (2005) Assay Paper	xenopus	1 image	NF stage 32 to NF stage 41	lens, retina, retinal ganglion cell layer, retinal inner nuclear layer, retinal inner plexiform layer, [+] retinal neural layer	in situ hybridization
Casarosa S et al. (2005) Assay Paper	xenopus	2 images	NF stage 54 to NF stage 63	ciliary marginal zone, eye, retina, retinal ganglion cell layer, retinal inner nuclear layer	in situ hybridization
Zuber ME et al. (2003) Assay Paper	laevis	1 image	NF stage 12.5	pre-chordal neural plate	in situ hybridization
Dichmann DS et al. (2008) Assay Paper	laevis	2 images	NF stage 17 to NF stage 31	anterior neural fold, diencephalon, eye, eye primordium, forebrain, [+] lens placode, midbrain, pre-chordal neural plate, retina	in situ hybridization
Wu HY et al. (2009) Assay Paper	xenopus	2 images	NF stage 15 to NF stage 37 and 38	anterior neural fold, diencephalon, eye, eye primordium, lens, [+] optic vesicle, retina, retinal inner nuclear layer	in situ hybridization
Mamada H et al. (2009) Assay Paper	laevis	2 images	NF stage 13 to NF stage 14	eye primordium	in situ hybridization
Murato Y and Hashimoto C (2009) Assay Paper	xenopus	3 images	NF stage 12.5 to NF stage 16	anterior neural fold, lens placode, pre-chordal neural plate	in situ hybridization
Murato Y and Hashimoto C (2009) Assay Paper	laevis	1 image	NF stage 12.5 to NF stage 16	anterior neural fold, lens placode	in situ hybridization
Rodríguez-Seguel E et al. (2009) Assay Paper	laevis	2 images	NF stage 14 to NF stage 16	anterior neural fold, diencephalon, pre-chordal neural plate	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	4 images	NF stage 13 to NF stage 33 and 34	diencephalon, eye, eye primordium, lens, pre-chordal neural plate, [+] retina, telencephalon	in situ hybridization
Qiu R et al. (2009) Assay Paper	xenopus	1 image	NF stage 13 to NF stage 33 and 34	diencephalon, eye primordium, lens, lens placode, optic vesicle, [+] pre-chordal neural plate, retina	in situ hybridization
Paper	xenopus	1 image	NF stage 14	eye primordium	in situ hybridization
Paper	laevis	2 images	NF stage 21 to NF stage 35 and 36	eye, optic field	in situ hybridization
Paper	xenopus	1 image	NF stage 40	retinal ganglion cell layer	in situ hybridization
Neural crest migration requires the activity of the extracellular sulphatases XtSulf1 and XtSulf2. Paper	tropicalis	1 image	NF stage 28	anterior neural tube, eye, forebrain, midbrain	in situ hybridization
FMR1/FXR1 and the miRNA pathway are required for eye and neural crest development. Paper	laevis	1 image	NF stage 13 to NF stage 23	anterior neural fold, eye primordium	in situ hybridization
FMR1/FXR1 and the miRNA pathway are required for eye and neural crest development. Paper	laevis	1 image	NF stage 13 to NF stage 23	anterior neural fold, eye primordium	in situ hybridization
FMR1/FXR1 and the miRNA pathway are required for eye and neural crest development. Paper	laevis	1 image	NF stage 13 to NF stage 23	eye primordium, optic field	in situ hybridization
FMR1/FXR1 and the miRNA pathway are required for eye and neural crest development. Paper	laevis	1 image	NF stage 13 to NF stage 23	eye primordium, optic field	in situ hybridization
FMR1/FXR1 and the miRNA pathway are required for eye and neural crest development. Paper	laevis	1 image	NF stage 13 to NF stage 23	optic field	in situ hybridization
FMR1/FXR1 and the miRNA pathway are required for eye and neural crest development. Paper	laevis	1 image	NF stage 13 to NF stage 23	eye primordium, optic field	in situ hybridization
Role of X-Delta-2 in the early neural development of Xenopus laevis. Paper	laevis	1 image	NF stage 21 to NF stage 25	anterior neural tube, forebrain, optic vesicle	in situ hybridization
Effects of retinoic acid upon eye field morphogenesis and differentiation. Paper	laevis	1 image	NF stage 12.5	anterior neural fold	in situ hybridization
Autoregulation of canonical Wnt signaling controls midbrain development. Paper	laevis	2 images	NF stage 29 and 30	eye, midbrain	in situ hybridization
Highly efficient transgenesis in Xenopus tropicalis using I-SceI meganuclease. Paper	tropicalis	1 image	NF stage 26	eye	in situ hybridization
Defining pallial and subpallial divisions in the developing Xenopus forebrain. Paper	laevis	4 images	NF stage 32 to NF stage 40	diencephalon, dorsal pallium, eye, forebrain, lateral ganglionic eminence, [+] lateral pallium, lens, medial pallium, pallium, pineal gland, pretectum, prethalamus, prosomere, prosomere 4, retina, telencephalon, ventral pallium, zona limitans intrathalamica	in situ hybridization
Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase. Paper	laevis	1 image	NF stage 13 to NF stage 35 and 36	eye, forebrain, pre-chordal neural plate	in situ hybridization
Xerl: a novel secretory protein expressed in eye and brain of Xenopus embryo. Paper	xenopus	1 image	NF stage 25 to NF stage 32	forebrain, midbrain	in situ hybridization
Morphogenetic movements underlying eye field formation require interactions between the FGF and ephrinB1 signaling pathways. Paper	laevis	1 image	NF stage 16	optic field	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 39	eye, retina, retinal neural layer	in situ hybridization
The homeodomain factor Xanf represses expression of genes in the presumptive rostral forebrain that specify more caudal brain... Paper	laevis	1 image	NF stage 28	diencephalon, eye	in situ hybridization
Alterations of rx1 and pax6 expression levels at neural plate stages differentially affect the production of retinal cell typ... Paper	laevis	1 image	NF stage 20	eye primordium, lens placode, optic vesicle, retina	in situ hybridization
Alterations of rx1 and pax6 expression levels at neural plate stages differentially affect the production of retinal cell typ... Paper	laevis	1 image	NF stage 20	diencephalon, eye primordium, optic vesicle, retina	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 39	eye, retina, retinal neural layer	in situ hybridization
Olfactory and lens placode formation is controlled by the hedgehog-interacting protein (Xhip) in Xenopus. Paper	laevis	1 image	NF stage 14	anterior neural fold, eye primordium	in situ hybridization
Roles of ADAM13-regulated Wnt activity in early Xenopus eye development. Paper	laevis	2 images	NF stage 12.5	pre-chordal neural plate	in situ hybridization
Argasinska J et al. (2009) Assay Paper	laevis	1 image	NF stage 28	eye, midbrain	in situ hybridization
Elkins MB and Henry JJ (2006) Assay Paper	laevis	1 image	NF stage 35 and 36	lens, lens fiber cell mass, retina, retinal neural layer	in situ hybridization
Transgenic Xenopus embryos reveal that anterior neural development requires continued suppression of BMP signaling after gast... Paper	laevis	5 images	NF stage 14 to NF stage 32	anterior neural fold, diencephalon, eye, eye primordium, lens placode, [+] midbrain, optic vesicle, pre-chordal neural plate, retina	in situ hybridization
Differential distribution of competence for panplacodal and neural crest induction to non-neural and neural ectoderm. Paper	laevis	1 image	NF stage 22	anterior neural fold, lens epithelium	in situ hybridization
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis. Paper	laevis	1 image	NF stage 22	eye, optic field, optic vesicle, retina	in situ hybridization
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis. Paper	laevis	1 image	NF stage 29 and 30	eye, lens placode, retina	in situ hybridization

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