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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
pax6	xenopus		optic vesicle [+] pigment layer,retinal layer,Muller cell,amacrine cell,bipolar neuron,central retina,choroid,choroid fissure,ciliary body,ciliary marginal zone,conjunctiva,cornea,eye photoreceptor cell,globe,horizontal cell,inner limiting membrane,iris,lens,lens epithelium,lens fiber cell mass,lens placode,lens transitional zone,lower eyelid,optic disc,optic fiber layer,optic nerve,outer limiting membrane,peripheral retina,photoreceptor layer,pupil,retina,retinal ganglion cell,retinal ganglion cell layer,retinal inner nuclear layer,retinal inner plexiform layer,retinal neural layer,retinal outer nuclear layer,retinal outer plexiform layer,retinal pigmented epithelium,retinal progenitor cell,retinal progenitor cell region,retinal stem cell,retinal stem cell region,sclera,choroid fissure,eye,iris,optic nerve,optic stalk,retinal neural layer

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Expression summary for pax6

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Experiment	Species	Images	Stages	Anatomy	Assay
Zaghloul NA and Moody SA (2007) Assay Paper	laevis	1 image	NF stage 20 to NF stage 37 and 38	ciliary marginal zone, eye, lens, lens placode, optic vesicle, [+] retina, retinal ganglion cell layer, retinal inner nuclear layer	in situ hybridization
Atkinson-Leadbeater K et al. (2009) Assay Paper	laevis	2 images	NF stage 21 to NF stage 25	optic vesicle, retina	in situ hybridization
Schlosser G and Ahrens K (2004) Assay Paper	laevis	3 images	NF stage 21 to NF stage 33 and 34	lens, lens placode, optic vesicle	in situ hybridization
Lupo G et al. (2005) Assay Paper	xenopus	3 images	NF stage 33 and 34	lens, retina	in situ hybridization
Wang JC and Harris WA (2005) Assay Paper	xenopus	1 image	NF stage 32 to NF stage 41	lens, retina, retinal ganglion cell layer, retinal inner nuclear layer, retinal inner plexiform layer, [+] retinal neural layer	in situ hybridization
Casarosa S et al. (2005) Assay Paper	xenopus	2 images	NF stage 54 to NF stage 63	ciliary marginal zone, eye, retina, retinal ganglion cell layer, retinal inner nuclear layer	in situ hybridization
Dichmann DS et al. (2008) Assay Paper	laevis	1 image	NF stage 31	eye, lens placode, retina	in situ hybridization
Wu HY et al. (2009) Assay Paper	xenopus	2 images	NF stage 15 to NF stage 37 and 38	eye, lens, optic vesicle, retina, retinal inner nuclear layer	in situ hybridization
Murato Y and Hashimoto C (2009) Assay Paper	xenopus	1 image	NF stage 15 to NF stage 16	lens placode	in situ hybridization
Murato Y and Hashimoto C (2009) Assay Paper	laevis	1 image	NF stage 15 to NF stage 16	lens placode	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	1 image	NF stage 33 and 34	eye, lens, retina	in situ hybridization
Qiu R et al. (2009) Assay Paper	xenopus	1 image	NF stage 20 to NF stage 33 and 34	lens, lens placode, optic vesicle, retina	in situ hybridization
Paper	laevis	1 image	NF stage 35 and 36	eye	in situ hybridization
Paper	xenopus	1 image	NF stage 40	retinal ganglion cell layer	in situ hybridization
Neural crest migration requires the activity of the extracellular sulphatases XtSulf1 and XtSulf2. Paper	tropicalis	1 image	NF stage 28	eye	in situ hybridization
Role of X-Delta-2 in the early neural development of Xenopus laevis. Paper	laevis	1 image	NF stage 21 to NF stage 25	optic vesicle	in situ hybridization
Autoregulation of canonical Wnt signaling controls midbrain development. Paper	laevis	1 image	NF stage 29 and 30	eye	in situ hybridization
Highly efficient transgenesis in Xenopus tropicalis using I-SceI meganuclease. Paper	tropicalis	1 image	NF stage 26	eye	in situ hybridization
Defining pallial and subpallial divisions in the developing Xenopus forebrain. Paper	laevis	2 images	NF stage 32 to NF stage 40	eye, lens, retina	in situ hybridization
Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase. Paper	laevis	1 image	NF stage 35 and 36	eye	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 39	eye, retina, retinal neural layer	in situ hybridization
The homeodomain factor Xanf represses expression of genes in the presumptive rostral forebrain that specify more caudal brain... Paper	laevis	1 image	NF stage 28	eye	in situ hybridization
Alterations of rx1 and pax6 expression levels at neural plate stages differentially affect the production of retinal cell typ... Paper	laevis	1 image	NF stage 20	lens placode, optic vesicle, retina	in situ hybridization
Alterations of rx1 and pax6 expression levels at neural plate stages differentially affect the production of retinal cell typ... Paper	laevis	1 image	NF stage 20	optic vesicle, retina	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 39	eye, retina, retinal neural layer	in situ hybridization
Argasinska J et al. (2009) Assay Paper	laevis	1 image	NF stage 28	eye	in situ hybridization
Elkins MB and Henry JJ (2006) Assay Paper	laevis	1 image	NF stage 35 and 36	lens, lens fiber cell mass, retina, retinal neural layer	in situ hybridization
Transgenic Xenopus embryos reveal that anterior neural development requires continued suppression of BMP signaling after gast... Paper	laevis	2 images	NF stage 25 to NF stage 32	eye, lens placode, optic vesicle, retina	in situ hybridization
Differential distribution of competence for panplacodal and neural crest induction to non-neural and neural ectoderm. Paper	laevis	1 image	NF stage 22	lens epithelium	in situ hybridization
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis. Paper	laevis	1 image	NF stage 22	eye, optic vesicle, retina	in situ hybridization
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis. Paper	laevis	1 image	NF stage 29 and 30	eye, lens placode, retina	in situ hybridization
Regulation of eye development by frizzled signaling in Xenopus.	laevis	1 image	NF stage 45	eye, lens, retina	immunohistochemistry
Regulation of eye development by frizzled signaling in Xenopus. Paper	laevis	1 image	NF stage 14 to NF stage 28	eye	in situ hybridization
Perron M et al. (1998) Assay Paper	laevis	2 images	NF stage 40	ciliary marginal zone, eye, retina, retinal ganglion cell layer, retinal inner nuclear layer	in situ hybridization
Microarray-based identification of Pitx3 targets during Xenopus embryogenesis. Paper	laevis	1 image	NF stage 27	eye	in situ hybridization
A homolog of Subtilisin-like Proprotein Convertase 7 is essential to anterior neural development in Xenopus. Paper	laevis	1 image	NF stage 28	retina	in situ hybridization
Mutual repression between Gbx2 and Otx2 in sensory placodes reveals a general mechanism for ectodermal patterning. Paper	laevis	1 image	NF stage 17	lens	in situ hybridization
Bugner V et al. (2011) Assay Paper	laevis	1 image	NF stage 13 to NF stage 23	eye, lens placode, retina	in situ hybridization
Nabeshima A et al. (2013) Assay Paper	laevis	1 image	NF stage 35 and 36	eye, lens, retina	in situ hybridization
Sumoylation controls retinal progenitor proliferation by repressing cell cycle exit in Xenopus laevis. Paper	laevis	2 images	NF stage 18 to NF stage 33 and 34	optic vesicle	in situ hybridization
Local translation of extranuclear lamin B promotes axon maintenance. Paper	laevis	1 image	NF stage 40 to NF stage 45	central retina, ciliary marginal zone, eye, peripheral retina, retina, [+] retinal neural layer	in situ hybridization
Transcription factors involved in lens development from the preplacodal ectoderm. Paper	laevis	1 image	NF stage 18	lens placode, optic vesicle	in situ hybridization
The ETS transcription factor Etv1 mediates FGF signaling to initiate proneural gene expression during Xenopus laevis retinal... Paper	laevis	2 images	NF stage 28	eye	in situ hybridization
Expanded retina territory by midbrain transformation upon overexpression of Six6 (Optx2) in Xenopus embryos. Paper	laevis	1 image	NF stage 32	eye, retinal neural layer, retinal pigmented epithelium	in situ hybridization
Expanded retina territory by midbrain transformation upon overexpression of Six6 (Optx2) in Xenopus embryos. Paper	laevis	1 image	NF stage 18	optic vesicle	in situ hybridization
Expanded retina territory by midbrain transformation upon overexpression of Six6 (Optx2) in Xenopus embryos. Paper	laevis	1 image	NF stage 35 and 36 to NF stage 37 and 38	eye, retina, retinal neural layer, retinal pigmented epithelium	in situ hybridization
Local translation of extranuclear lamin B promotes axon maintenance. Paper	laevis	1 image	NF stage 40 to NF stage 45	central retina, peripheral retina, retinal ganglion cell, retinal ganglion cell layer, retinal inner nuclear layer, [+] retinal inner plexiform layer, retinal neural layer	in situ hybridization
Henry JJ et al. (2002) Assay Paper	laevis	1 image	NF stage 15 to NF stage 32	lens	in situ hybridization
The lipid phosphatase LPP3 regulates extra-embryonic vasculogenesis and axis patterning. Paper	laevis	1 image	NF stage 22	optic vesicle	in situ hybridization
Retinal patterning by Pax6-dependent cell adhesion molecules.	laevis	1 image	NF stage 42	eye, lens, retina, retinal neural layer	immunohistochemistry

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