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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
lhx1	xenopus		involuted dorsal mesoderm [+] Eberth-Kastschenko layer,abdominal myoblast,anterior notochord,archenteron roof midline,axial ossicle,caudal presomitic mesoderm,cranial skeleton,dermatome,dermomyotome,dorsal endoderm,dorsomedial edge of myotome,flexural organ,left-right organizer,left-right organizer primordium,mandibular mesenchyme,monociliated cell,myocoelic slit,myotome,notochordal sheath,perichordal tissue,postcranial axial skeleton,posterior notochord,prechordal plate,presomitic mesoderm,rib,rostral presomitic mesoderm,sclerotomal cartilage,sclerotomal mesenchyme,sclerotome,stratum compactum,stratum spongiosum,syndetome,transverse process,urostyle,vacuolated notochordal tissue,ventrolateral edge of myotome,vertebra,vertebral centrum,vertebral column,vertebral element,axial mesoderm,axial skeleton,cervical vertebra,dermatome,dermis,elastica externa,flexural organ,gastrocoel roof plate,head somite 1,head somite 2,head somite 3,head somite 4,myotome of head somite 1,myotome of head somite 2,myotome of head somite 3,myotome of head somite 4,myotome of tail somite 14,myotome of tail somite 15,myotome of tail somite 16,myotome of tail somite 17,myotome of tail somite 18,myotome of trunk somite 1,myotome of trunk somite 10,myotome of trunk somite 11,myotome of trunk somite 12,myotome of trunk somite 13,myotome of trunk somite 2,myotome of trunk somite 3,myotome of trunk somite 4,myotome of trunk somite 5,myotome of trunk somite 6,myotome of trunk somite 7,myotome of trunk somite 8,myotome of trunk somite 9,notochord,notochordal epithelium,paraxial mesoderm,presomitic mesoderm,presumptive axial mesoderm,presumptive paraxial mesoderm,sacral vertebra,sclerotome of head somite 4,sclerotome of tail somite 14,sclerotome of tail somite 15,sclerotome of tail somite 16,sclerotome of tail somite 17,sclerotome of tail somite 18,sclerotome of trunk somite 1,sclerotome of trunk somite 10,sclerotome of trunk somite 11,sclerotome of trunk somite 12,sclerotome of trunk somite 13,sclerotome of trunk somite 2,sclerotome of trunk somite 3,sclerotome of trunk somite 4,sclerotome of trunk somite 5,sclerotome of trunk somite 6,sclerotome of trunk somite 7,sclerotome of trunk somite 8,sclerotome of trunk somite 9,somite,tail somite 14,tail somite 15,tail somite 16,tail somite 17,tail somite 18,trunk somite 1,trunk somite 10,trunk somite 11,trunk somite 12,trunk somite 13,trunk somite 2,trunk somite 3,trunk somite 4,trunk somite 5,trunk somite 6,trunk somite 7,trunk somite 8,trunk somite 9,urostyle

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Expression summary for lhx1

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Experiment	Species	Images	Stages	Anatomy	Assay
Vize Lab Assay Vize Lab	laevis	1 image	NF stage 18	notochord	in situ hybridization
Vize Lab Assay Vize Lab	laevis	1 image	NF stage 33 and 34	notochord	in situ hybridization
Zorn Lab Assay Zorn Lab	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
Cartry J et al. (2006) Assay Paper	laevis	1 image	NF stage 12	axial mesoderm	in situ hybridization
Hikasa H et al. (2002) Assay Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
Colas A et al. (2008) Assay Paper	laevis	2 images	NF stage 14 to NF stage 16	notochord	in situ hybridization
Yasuo H and Lemaire P (2001) Assay Paper	laevis	1 image	NF stage 13	notochord	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	3 images	NF stage 24 to NF stage 46	notochord	in situ hybridization
Zorn Xl.32655_lhx1 Assay Zorn Lab	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
Smith TGas028k15 Assay Smith Lab	tropicalis	1 image	NF stage 40	notochord	in situ hybridization
Xenopus ADAMTS1 negatively modulates FGF signaling independent of its metalloprotease activity. Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
A comparative analysis of frog early development. Paper	laevis	1 image	NF stage 13	notochord	in situ hybridization
Clone: pXH32-3 derived probe in situ hybridization	laevis	2 images	NF stage 29 and 30 to NF stage 46	notochord	in situ hybridization
Comparison of Lim1 expression in embryos of frogs with different modes of reproduction.	laevis	1 image	NF stage 12.5	notochord, prechordal plate	immunohistochemistry
Comparison of Lim1 expression in embryos of frogs with different modes of reproduction.	laevis	1 image	NF stage 13	notochord, prechordal plate	immunohistochemistry
Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Sp... Paper	laevis	1 image	NF stage 10.5 to NF stage 27	involuted dorsal mesoderm, notochord, prechordal plate	immunohistochemistry
Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Sp... Paper	laevis	3 images	NF stage 10.5 to NF stage 27	involuted dorsal mesoderm	in situ hybridization
A gene regulatory network controlling hhex transcription in the anterior endoderm of the organizer. Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
Genomic analysis of Xenopus organizer function. Paper	laevis	1 image	NF stage 11.5	involuted dorsal mesoderm	in situ hybridization
Hooker L et al. (2012) Assay Paper	laevis	1 image	NF stage 19 to NF stage 27	paraxial mesoderm, presomitic mesoderm, somite	in situ hybridization
Analysis of the developing Xenopus tail bud reveals separate phases of gene expression during determination and outgrowth. Paper	laevis	1 image	NF stage 14 to NF stage 29 and 30	axial mesoderm, notochord	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	4 images	NF stage 14 to NF stage 32	axial mesoderm, notochord	in situ hybridization
Expression of the LIM class homeobox gene Xlim-1 in pronephros and CNS cell lineages of Xenopus embryos is affected by retin... Paper	laevis	1 image	NF stage 12 to NF stage 31	notochord	in situ hybridization
Buisson I et al. (2014) Assay Paper	laevis	1 image	NF stage 18	axial mesoderm	in situ hybridization
Espiritu EB et al. (2018) Assay Paper	laevis	1 image	NF stage 15	notochord	in situ hybridization

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