Search Criteria |
Gene/Clone | Species | Stage | Anatomy Item | Experimenter |
---|---|---|---|---|
shh | xenopus | neural groove [+] |
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Expression summary for shh
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Experiment | Species | Images | Stages | Anatomy | Assay |
Harland lab in situ screen Assay
Harland Lab |
tropicalis |
1 image |
NF stage 20 | neural groove | in situ hybridization |
López SL et al. (2003) Assay
Paper |
laevis |
1 image |
NF stage 15 | neural groove | in situ hybridization |
Nguyen V et al. (2005) Assay
Paper |
laevis |
1 image |
NF stage 14 | neural groove | in situ hybridization |
Offner N et al. (2005) Assay
Paper |
laevis |
1 image |
NF stage 16 | neural tube | in situ hybridization |
Lupo G et al. (2005) Assay
Paper |
xenopus |
1 image |
NF stage 18 | neural groove | in situ hybridization |
Silva AC et al. (2003) Assay
Paper |
laevis |
1 image |
NF stage 22 to NF stage 24 | neural tube | in situ hybridization |
Howell M et al. (2002) Assay
Paper |
xenopus |
1 image |
NF stage 35 and 36 | brain | in situ hybridization |
Inomata H et al. (2008) Assay
Paper |
laevis |
2 images |
NF stage 13 | neural groove | in situ hybridization |
The secreted serine protease xHtrA1 stimulates long-range FGF signaling in the early Xenopus embryo.
Paper |
laevis |
1 image |
NF stage 14 | neural groove | in situ hybridization |
Cholesterol homeostasis in development: the role of Xenopus 7-dehydrocholesterol reductase (Xdhcr7) in neural development.
Paper |
laevis |
1 image |
NF stage 14 to NF stage 33 and 34 | neural groove, neural tube | in situ hybridization |
Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase.
Paper |
xenopus |
1 image |
NF stage 29 and 30 to NF stage 35 and 36 | brain | in situ hybridization |
Olfactory and lens placode formation is controlled by the hedgehog-interacting protein (Xhip) in Xenopus.
Paper |
laevis |
1 image |
NF stage 17 to NF stage 32 | brain, diencephalon, neural groove, ventricular zone | in situ hybridization |
Neural tube closure requires Dishevelled-dependent convergent extension of the midline.
Paper |
laevis |
1 image |
NF stage 21 | neural groove | in situ hybridization |
Distinct expression of two types of Xenopus Patched genes during early embryogenesis and hindlimb development.
Paper |
laevis |
1 image |
NF stage 14 | neural groove | in situ hybridization |
R-Spondin2 is a secreted activator of Wnt/beta-catenin signaling and is required for Xenopus myogenesis.
Paper |
laevis |
1 image |
NF stage 50 | brain, neural tube, thalamus, zona limitans intrathalamica | in situ hybridization |
Xenbase User Curated Experiment
European Xenopus Resource Centre (EXRC) |
tropicalis |
1 image |
NF stage 32 | brain | in situ hybridization |
Xenopus sonic hedgehog guides retinal axons along the optic tract.
Paper |
laevis |
1 image |
NF stage 32 to NF stage 37 and 38 | brain, neural tube, optic stalk | in situ hybridization |
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation.
Paper |
laevis |
1 image |
NF stage 41 | brain, forebrain, hindbrain, midbrain, pineal gland | in situ hybridization |
The role of Xenopus dickkopf1 in prechordal plate specification and neural patterning.
Paper |
laevis |
1 image |
NF stage 13 | neural groove | in situ hybridization |
The role of Xenopus dickkopf1 in prechordal plate specification and neural patterning.
Paper |
xenopus |
1 image |
NF stage 44 | midbrain, telencephalon | in situ hybridization |
The Alzheimer-related gene presenilin-1 facilitates sonic hedgehog expression in Xenopus primary neurogenesis.
Paper |
laevis |
1 image |
NF stage 13 to NF stage 14 | neural groove, neural tube | in situ hybridization |
Suzuki M et al. (2010) Assay
Paper |
laevis |
1 image |
NF stage 15 to NF stage 16 | neural groove, neural tube | in situ hybridization |
Takabatake T et al. (2000) Assay
Paper |
laevis |
2 images |
NF stage 27 to NF stage 35 and 36 | brain, forebrain | in situ hybridization |
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis.
Paper |
laevis |
1 image |
NF stage 18 to NF stage 29 and 30 | chordoneural hinge, forebrain, hindbrain, midbrain, neural groove | in situ hybridization |
Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development.
Paper |
laevis |
1 image |
NF stage 14 | neural tube | in situ hybridization |
Essential role of CREB family proteins during Xenopus embryogenesis.
Paper |
laevis |
1 image |
NF stage 28 | brain | in situ hybridization |
Rankin SA et al. (2012) Assay
Paper |
laevis |
1 image |
NF stage 33 and 34 to NF stage 35 and 36 | brain, diencephalon, forebrain, hindbrain | in situ hybridization |
Beck CW and Slack JM (1998) Assay
Paper |
laevis |
1 image |
NF stage 32 | chordoneural hinge, neural tube | in situ hybridization |
Distinct expression and shared activities of members of the hedgehog gene family of Xenopus laevis.
Paper |
laevis |
1 image |
NF stage 19 to NF stage 29 and 30 | anterior neural tube, brain, forebrain, hindbrain, midbrain, [+] | in situ hybridization |
Multiple stage-dependent roles for histone deacetylases during amphibian embryogenesis: implications for the involvement of ...
Paper |
laevis |
1 image |
NF stage 33 and 34 to NF stage 41 | brain, forebrain | in situ hybridization |
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis.
Paper |
tropicalis |
1 image |
NF stage 23 to NF stage 35 and 36 | neural tube | immunohistochemistry |
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis.
Paper |
tropicalis |
1 image |
NF stage 23 to NF stage 35 and 36 | hindbrain, midbrain, pretectum | in situ hybridization |
Rankin SA et al. (2014) Assay
Paper |
laevis |
1 image |
NF stage 32 | brain | in situ hybridization |
Early development of the neural plate: New roles for apoptosis and for one of its main effectors caspase-3.
Paper |
laevis |
1 image |
NF stage 27 | brain, subpallium, zona limitans intrathalamica | in situ hybridization |
Juraver-Geslin HA et al. (2014) Assay
Paper |
laevis |
5 images |
NF stage 29 and 30 to NF stage 37 and 38 | basal forebrain, forebrain, zona limitans intrathalamica | in situ hybridization |
Patterns of hypothalamic regionalization in amphibians and reptiles: common traits revealed by a genoarchitectonic approach.
|
laevis |
1 image |
NF stage 46 | preoptic area | immunohistochemistry |
Patient Lab |
laevis |
6 images |
NF stage 10.5 to NF stage 40 | brain, forebrain | in situ hybridization |
Koide T et al. (2006) Assay
Paper |
laevis |
1 image |
NF stage 22 to NF stage 44 | brain, neural tube | in situ hybridization |
Peyrot SM et al. (2011) Assay
Paper |
laevis |
3 images |
NF stage 16 to NF stage 35 and 36 | neural groove, neural tube | in situ hybridization |
Prepatterning and patterning of the thalamus along embryonic development of Xenopus laevis.
Paper |
laevis |
1 image |
NF stage 33 and 34 to NF stage 37 and 38 | brain, diencephalon, forebrain, zona limitans intrathalamica | immunohistochemistry |
Prepatterning and patterning of the thalamus along embryonic development of Xenopus laevis.
Paper |
laevis |
1 image |
NF stage 33 and 34 to NF stage 37 and 38 | diencephalon, forebrain, prethalamus, telencephalon, thalamus, [+] | in situ hybridization |
Juraver-Geslin HA et al. (2011) Assay
Paper |
laevis |
1 image |
NF stage 32 | zona limitans intrathalamica | in situ hybridization |
A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification.
Paper |
laevis |
2 images |
NF stage 29 and 30 to NF stage 35 and 36 | brain, neural tube | in situ hybridization |
Prager A et al. (2017) Assay
Paper |
laevis |
1 image |
NF stage 20 | neural groove, neural tube | in situ hybridization |
Kulkarni SS and Khokha MK (2018) Assay
Paper |
tropicalis |
1 image |
NF stage 16 | neural groove | in situ hybridization |
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