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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
sox9	xenopus		otic vesicle [+] amphibian papilla,anterior crista,auditory hair cell,auditory ossicle,auditory tube,basilar papilla,endolymphatic duct,footplate of the stapes,inner ear,lagena,lateral crista,middle ear,osseous labyrinth,otic capsule,oval window,pars externa of the stapes,pars interna of the stapes,pars media of the stapes,posterior crista,prootic bone,saccular macula,semicircular canal,stapes,tympanic annulus,tympanic disk,vestibular apparatus,vestibule,auditory apparatus,otic capsule

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Expression summary for sox9

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Experiment	Species	Images	Stages	Anatomy	Assay
Saint-Germain N et al. (2004) Assay Paper	xenopus	1 image	NF stage 29 and 30	otic vesicle, semicircular canal	in situ hybridization
O'Donnell M et al. (2006) Assay Paper	laevis	1 image	NF stage 35 and 36	otic vesicle	in situ hybridization
Nichane M et al. (2008) Assay Paper	xenopus	1 image	NF stage 28	otic vesicle	in situ hybridization
Spokony RF et al. (2002) Assay Paper	laevis	1 image	NF stage 32	otic vesicle	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	1 image	NF stage 33 and 34	otic vesicle	in situ hybridization
Paper	laevis	1 image	NF stage 22 to NF stage 24	otic vesicle	in situ hybridization
Paper	laevis	1 image	NF stage 24 to NF stage 45	auditory apparatus, inner ear, otic vesicle, semicircular canal	in situ hybridization
Paraxial T-box genes, Tbx6 and Tbx1, are required for cranial chondrogenesis and myogenesis. Paper	laevis	1 image	NF stage 27	otic vesicle	in situ hybridization
Paraxial T-box genes, Tbx6 and Tbx1, are required for cranial chondrogenesis and myogenesis. Paper	xenopus	1 image	NF stage 27	otic vesicle	in situ hybridization
Hairy2-Id3 interactions play an essential role in Xenopus neural crest progenitor specification. Paper	laevis	1 image	NF stage 28	otic vesicle	in situ hybridization
Serotonin 2B receptor signaling is required for craniofacial morphogenesis and jaw joint formation in Xenopus. Paper	laevis	1 image	NF stage 28	otic vesicle	in situ hybridization
Sox10 regulates the development of neural crest-derived melanocytes in Xenopus. Paper	laevis	1 image	NF stage 32	otic vesicle	in situ hybridization
RIPPLY3 is a retinoic acid-inducible repressor required for setting the borders of the pre-placodal ectoderm. Paper	laevis	1 image	NF stage 32	otic vesicle	in situ hybridization
The protein kinase MLTK regulates chondrogenesis by inducing the transcription factor Sox6. Paper	laevis	1 image	NF stage 35 and 36 to NF stage 41	otic vesicle	in situ hybridization
A gene expression map of the larval Xenopus laevis head reveals developmental changes underlying the evolution of new skelet... Paper	laevis	1 image	NF stage 33 and 34	otic vesicle	in situ hybridization
Tae HJ et al. (2015) Assay Paper	laevis	1 image	NF stage 26 to NF stage 35 and 36	otic vesicle	in situ hybridization
Patient Lab	laevis	1 image	NF stage 29 and 30	otic vesicle	in situ hybridization
Identifying domains of EFHC1 involved in ciliary localization, ciliogenesis, and the regulation of Wnt signaling. Paper	laevis	1 image	NF stage 25	otic vesicle	in situ hybridization
Macrì S et al. (2016) Assay Paper	laevis	1 image	NF stage 28	otic vesicle	in situ hybridization
Devotta A et al. (2016) Assay Paper	laevis	1 image	NF stage 28	otic vesicle	in situ hybridization
Sox9 function in craniofacial development and disease. Paper	laevis	2 images	NF stage 20 to NF stage 28	otic vesicle	in situ hybridization
Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development. Paper	laevis	1 image	NF stage 28	otic vesicle	in situ hybridization
Neilson KM et al. (2016) Assay Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	otic vesicle	in situ hybridization
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. Paper	laevis	1 image	NF stage 37 and 38	otic vesicle	in situ hybridization
Six1 proteins with human branchio-oto-renal mutations differentially affect cranial gene expression and otic development. Paper	laevis	1 image	NF stage 28 to NF stage 32	otic vesicle	in situ hybridization
Sullivan CH et al. (2019) Assay Paper	laevis	2 images	NF stage 24 to NF stage 28	otic vesicle	in situ hybridization
Mcrs1 interacts with Six1 to influence early craniofacial and otic development. Paper	laevis	1 image	NF stage 28 to NF stage 33 and 34	otic vesicle	in situ hybridization

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